Ll_transcript_11087

• Id Trinity: FTRINITY_DN56855_c4_g1_i3
• Name Transcript: Ll_transcript_11087
• Sequence: TTTATATTACTGGTTTAATACTCAGATAAAGTATGTGATGATGCGTGAAACAGGATCTGCGTCCGTGTAGTGTCTCCCTATATAATTGTACATTGTATGA CACAGAATTGAACAAGAGCTATTAGTCACAGAGAGTGTCTCATTACAGATAAGCCCAAGCTTTTTTCTTAAGTTCTTTGTCAAGATGGCATCCGTTCATG CTAATGTGGCATCGATTGTATGCAAGAATGGTAACAATGGTTGTCAATCGAAGTTCCCGAGTACTGCATTCTTGCCTGGATTTGATGTTGTAGGGAGGGT TTCAAGTGCATGGAAGAAGGAACTTACCCCATCTTACATGGCTTTGGGACCTAAAGCTACATTAACATTTGATCCTCTTGCTACCAATTCAGACAAAACC AAACAGAAGAAAAGTACTGTTGACCCTGCTTCTCCTGATTTTCTGCCTCTTCCTTCCTTTGAACAATGCTTTCCAAAGAGCACAAAAGAACACAGGGAAG TTATTCATGAAGAAACTGGCCATTCGCTAAAAGTTCCCTTTCGACGAGTTCACCTGAGTGGAGATGAACCACAGTTTGATACCTATGACACAAGTGGTCC TCAAAATATAAATCCCAGAGTTGGACTCCCGAAATTGCGCAAAGACTGGATTGACAGGCGAGAGAAAATAGGTGCACCAAGATTCACTCAGATGTACTAT GCTAAGCAGGGAATCATTACTGAAGAGATGCTTTACTGTGCCACTCGTGAGAAGCTCAGCCCTGAGTTTGTGAGGTCAGAAGTTGCTCGTGGACGGGCTA TCATCCCTTCCAACAAGAACCACTTGGAGCTAGAGCCCATGATAGTTGGAAGAAACTTTTTGGTGAAAGTAAATGCAAACATCGGAAATTCTGCGGTTGC AAGCTCTATAGAAGAAGAAGTTTACAAGGTTCAGTGGGCAACTATGTGGGGAGCTGATACAGTCATGGATCTCTCAACTGGTCGTCATATCCATGAAACT CGAGAGTGGATCCTACGCAACTCTTCTGTACCAGTTGGGACTGTACCTATTTATCAAGCACTTGAAAAGGTTAATGGGATTGCTGAAAATCTTACCTGGG AGGTCTTCAGGGATACCCTGATCGAACAAGCTGAACAAGGTGTTGATTACTTCACTATCCATGCAGGAGTTCTTCTGAGATATATTCCATTAACAGCGAA GCGCATGACTGGTATAGTCTCTAGAGGAGGATCTATTCATGCAAAATGGTGCTTAGCTTATCATAAGGAGAACTTTGCTTATGAGCATTGGGATGACATA CTTGATATCTGTAATCAGTATGATGTGGCCTTATCGATAGGCGACGGGCTACGACCTGGATCAATTTATGATGCCAATGACACAGCTCAATTTGCGGAGC TCTTGACACAGGGAGAACTGACCAGAAGAGCATGGGAAAAGGATGTACAGGTGATGAATGAAGGACCTGGACATATCCCAATGCACAAGATTCCTGAAAA CATGGAAAAACAACTAGAATGGTGCAATGAAGCACCATTCTACACTCTTGGTCCTTTAACAACTGATATTGCTCCTGGTTATGATCACATCACCTCTGCA ATTGGTGCTGCCAATATTGGGGCACTAGGTACTGCTCTTCTCTGTTATGTGACTCCAAAAGAACACCTTGGATTACCGAACCGGGATGATGTGAAGGCTG GAGTTATAGCTTACAAGATAGCTGCTCATGCTGCTGATTTAGCCAAGTGTCACCCACTTGCTCAAGCCTGGGATGATGCACTAAGCAAGGCGAGATTTGA ATTTCGATGGATGGACCAATTTGCTTTGTCATTGGATCCAATGACAGCCATGTCCTTCCATGATGAAACATTGCCTTCGGAAGGTGCTAAGGTGGCCCAT TTCTGCTCTATGTGTGGCCCTAAATTCTGCTCTATGAAGATAACCGAGGATGTGCGCAAGTATGCAGAAAAGCATGGCTATGGTGATGCTGAAGAAGCCT TAAAACAAGGGATGGAGGCTATGAGTGCTGAATTTCGAGCTGCCAAGAAAACTATCAGCGGTGAACAGCATGGTGAAGCTGGTGGAGAGATTTACTTGCC AACAACTTACTTAAGCTCCAAAGAGAGTACCATCTGAGATAACTTGGAGCTAGCTACACAACTGGATTATCTGGATGGTGAATCAATTTCAAGCTAGGGG AGAATACAAATATGAGTTTGCTGGCAACTTTTAAGAACTTTAATCTTTATCAAACTTTTCTGGTGTTCTCCAATTGTCAGGAATAAATTGCTCCAGTTTT ATATTTAAGACCTTCTTTATCTATTATTTTGAGGCATTTTATTAACTCCAAATGCACCAGGGGTGCCTCTATCTGCATGAGCTCCTAAGATTAAGTTAGG ATGCTAGCAGATTAGGCTGAGACAGTCCCTTTGAACCTGAACAGGGTGATGCCTGCGTAGGGAGTGTGCAATTTTTTTTCTGTATGCTTTTGCAGGGAGT GTGAATTATATACATGGATTGAGCTTGGATTGTTCTTGGGAAGCAGATTCAGCAAGATGGCAAAAATGTAGCTGCACAAGAAGCTCCTACTACCAGATAA TAAAGTAATGCAACATAAATTCTTTTCAAAGAAAAAACAACATAAAGTACACAATCTTACTTACTGATTTATATTATGAAAGATCAAGTTTTCACTAATA AAACTACTCACCATATTAATTTGGCATGTCAAAATATATGAACATAGTATCTATGATTTTTCTTTTGTGCAACAAGATAGATTAATCTATTGGGAAACAC AGACATTATCAAAGTAAATTTTGTCACTTTATTAGTTCTAATCCATCCTATCTTGTTTAAGGAAATCTATCAGAGTTATTTTACTGTAAATCTATATTGT GCATTAACTTTCAGCAATAGTGCTGAGATAAAAATAAAAAATCCATTTTTGTTATGACCAAAAAAATCTCATATTTCAATCCAACATAGCTTCATAGATG CATGGGAAACAAAAAGCTAGTCTTTTACCTGGGCCATTATGTATTCTACTTGAAGTTTTCTTATTAGGAAGTGAGTGAAGATGTTTAGATAAGATTATAT AATGTTTTCATTACTTCTCTATATGGATGAAATTTTGCACTCTCTGAAGATTCACAAATTCTCACCACATGAAGGATTGGTTCAATGAAGTTGCTTGGCA CAGGTTGTTTTATGTTATTACTAGCTTGTTACAGTACATATCATTAACTAAACTTTTGTTTTGTATGTCAATAACCACTAGAGTGAAATTGGTGTAAGCA AAATGACTACTACTATCATTCTTGAATAGAAATAAGACTTTGTAAACAGTCTTCTTTCTTCTGTGGTTCTGTTGAAATTTAATCTGCATAAAGAGTTACT CATTATTGTTGGAGTTACAAATATTTATAAGCCATAAATAAAAATTCCATGCCTAAAACATTACATGCACTGATGACAGTGAGTTCATATTTTCTGAACA TTTAGCAAGTGGTTGCCATATTCTGATCATTTTGCAGCAGATGATATCATGTTATCTTAGTACTATTAACTACCCATGACAAATTTCCTATCAAGGTTGA AACTTGGCCCATATTTAAGGCATTAAATCTTGTCAAGTTTATCATAATCTTGAACTTGGTTCAATTCTATCCAACTTTTGTAACATTTTCATAAATGAAT TAGGGTCTAGTAAACTAACTTATGATACCTCATGATAAAGCTAAATGTATGATATGGTAAGGTCCATTTACAATGAAAACTTCTCACGCTTGTATAGATC AAAATCTAAGTGAATAAACTGAAATATAATGCATGCATTTGAATTAGATATTTGGTATGTAGACTTTGTTCAATTCTTGGCAAACAAGCCACCAAAACCA CCATCCTTCTTCTTTTGAGTCACTACCACAGAGTTCTTGCGGCTAATGGTGGTTGCCTCCTCCATTATTTTTCTCCACCATCTTCAGGATAAGATTGGTT TATAGCAGTTGATCTTATCCTCTAGAACATAAAAACATAGTGGTGACTTCAAAGTAGTCGTATAACAAGCGCGTCATAAATGTATGAAGGATACATGTAT TTTTTTCCTTAAAAAAAATGGACATGTCTTCAACTTCTCAGTAAAAGGAGTGTGATTTAATCCAGAACAAATAGCATATACAACTGTAATATAAGGGTTT GTTTTGAAGTTGTTTAGGGGAAATAAGAGAAAATAAAGGGCTCGAGAATTATTTCACAAGTGTAAAAAA
• Tissue: flowers
• Gene name: LI_gene_63731;
• Additional information: details;

Expression of Ll_transcript_11087

FPKM

• FPAB: 2.2
• FPNAB: 7.8
• LF1: 73
• LF2: 121.6
• LF3: 104.7
• LF4: 50.1
• UF1: 59.8
• UF2: 103
• UF3: 68.3
• UF4: 39.2

Labels

• FPAB: abscising flower pedicels
• FPNAB   : non-abscising flower pedicels
• LF1: lower flowers stage 1
• LF2: lower flowers stage 2
• LF3: lower flowers stage 3
• LF4: lower flowers stage 4
• UF1: upper flowers stage 1
• UF2: upper flowers stage 2
• UF3: upper flowers stage 3
• UF4: upper flowers stage 4

Annotations of Ll_transcript_11087

• Blastp: Phosphomethylpyrimidine synthase, chloroplastic from Arabidopsis with 85.16% of identity
• Blastx: Phosphomethylpyrimidine synthase, chloroplastic from Arabidopsis with 85.16% of identity
• Eggnog: thiamine diphosphate biosynthetic process(COG0422)
• Kegg: Link to kegg annotations (AT2G29630)
• CantataDB: -
• Mirbase: -
• Ncbi protein: Link to NCBI protein (XP_019455698.1)
• Pfam: ThiC-associated domain (PF13667.5)
• Rfam: -
• GO: Links to GO: General; Genes and gene products; Annotations; Ontology;
  Links to GO: General; Genes and gene products; Annotations; Ontology;