| Id Trinity | FTRINITY_DN56917_c4_g1_i5 |
|---|---|
| Name Transcript | Ll_transcript_204427 |
| Sequence | AAGACAAACCCTGCAAACGGCGTCACTTTATGACTTTTGTTTTGCTCATCATCACATCCACAACAACACTCTCTCAGAGAATGTGTTATGAGTTGAGAAC ATAACATAACATAGCACAGTCTTCTAACTTCTTCACTTCACTTTCCCATTTTATTCTTCTTTACCGATTACCGTCGTTACCGGTGACGAATAGGTGTTAA ATGAGTGAGATCTGAGTTGGTTAATTGAGAATGGGAAGTGTTTCGTCTGAAGATGGTTCCGACCAACAGAGTGACCGTTGCGGCAGCTACACACTCAGTG CTGACGTCAGCGAATCTGAGAGTTCCACCAGTTTCTGCGGTGCTCGCCGTTTCGACACCGAAGGTGCCTCCTCCTCCGCCAATCTCTCCCCGCTTCCCGC CGTTGCTGGCAAAGATGTGCTTCTCTGGAATCACAACCCTAAAAAACGTGACCTAGATTTGTCAGAAGTGGAAATGATGAAGGAGAGGTTCGCGAAGCTG CTTTTAGGGGAAGATATGTCTGGTGGAGGCAAAGGAGTCTGCACTGCGCTTGCAATCTCAAATGCAATAACAAATCTCTCTGGTTAGTTTTGTGAATTTG CATTTAAAAATAAATGTTGTGTGTGTATAGATTGTAACTTTGTGTAAGAAATTAAAAATTGCAGCAACTGTGTTTGGTGAGCTATGGAGGTTAGAGCCCC TAGCAGCACCGAAAAAGGCTATGTGGCGTAGGGAAATGGAATGGCTCTTATGCGTAAGCGATTCTATTGTGGAGCTCGTGCCAGCTGTGCAGCAGTTCCC TGGTGGTGGAACATATGAAGTTATGGCTATGCGTCCTCGCTCCGATTTGTTTATCAATTTGCCAGCTTTGAAGAAGCTTGATGGAATGCTGCTTGGTATG CTTGATGGATTTGAAGATACACAGTTTTGGTATGTTGATAAGGGAATTATATTGGGCGATTCCAAGGATTGTGATGACTATAATGGTAGACCTTCAGTTA GGCAAGAGGAGAAATGGTGGCTTCCTTCGGCTAAGGTACCGCCAAATGGCTTGTCTGAGATTGATCGGAAGAGGTTGCAGCAGTGCAGGGATTGCACCAA CCAGATATTAAAGGCTGCCATGGCAATTAATAGTTCTGTTCTTGCAGAAATGGAAATTCCTCGTGCTTACATTGGATCCTTGCCCAAGAATGGAAAGGCT TGTCTAGGGGATATAATCTATCGATACGTAACTGCTGACCAGTTCTCACCTGAGTGTCTCCTTGATTGCCTGGATCTCTCATCAGAGCACCACACTTTGG ATGTAGCTAATAGAATTGAGGCTGCCGTGCATGTATGGCGGCTGAAGGACAGCAAGAAACATTCAAATTCAGTGAAAGCCAGACGCTCTTGGGGTGGAAA GGTGAAGGGCCTGGTTGCTAACAATGAAAGGAACCATTTTCTTTCTCAACGAGCAGAGACCCTTCTGCAAAGCTTGAAACACCGGTTTCCAGGGCTCCCT CAAACCGCACTAGATATGGCCAAGATACAATATAATAAGGTACATTATCTTAATCTTTAGTTTGGACTTTGGATTTAACTCACAATCTGTTATGTCCTAT GGCCACAGCTTAAAATATTTGCTAATCTAGTTAATAGGTCTGTCAAGGCAATATGGAATATTTAATGTGCAACTGAGGACTTGATTGAGAAATTCTTCCC AGCAGTAACTAGTGAGAGAAGGGGGTTTAGGTCTTGTCTACATTGACTTCACAGATAGATACATTAACATGTATGATTTCTACCAATATTTAATGGAAAC CACGGGTACAAGTAACCATGACTCTGATATTATAGTAGTGATTTATTATTATACAGTTACTGAGGACTGGCACTGGGTGAAGGGGGTTTAGGTTCAACTC AATAAGCTTTTGTGAATTTTACTTTTCCTTGCAGGATGTAGGGCAATCTATTCTTGAAAGCTATTCAAGGGTGATGGAGAGCTTGGCCTTTAACATAATA GCCAGGATTGATGATGTCCTTTATGTTGATGACACTGTAAAGCGCCGTTCAGCCGCAGAGTCTATCTCGCTCTTCAGCCGAGGTGGTTTTGGTGGTATGC CTATTCAGAAGAGAATGTCTCCAAGTCCATTCTCAATTCAACACACCCCATATGCCTCTCCCTTTGCAACCCCATCTTTCTGTTCCTCCTCTCCCATTAC TGGGAGCCCATGCAGTCCTCAAATAACACCTACCGTGAAGCGGATCGGTCGAAAGGAGGCAACGGATTCTAAGCCTGAAAAGTTGGTATCCGCTGATTTG GAGAGGGTATGGTCATTCACGGGAAACCTTAGTTCAAGAACAGCTTCTGGTAATGCCCCAGAAAGAGACTAAGTTCTACAATTTATATTACTTGCATTTC TGGCTAAAGCCTTTGATCCCACTCCTTGTATATGAGGTTTTAATTTTTGTATATTTCTAGGCAGTACAAGTAGAATTATGTTGAAAGATTATGTCAATGA ATCATTCTAGAGGCCACTCTCAATATGCATTTATAATTGCATATGCTAAATATGGTTCTGGACTTTATAACTGACTCAAGATCAGCATTAGTCTTCTCCC TTGCCCTCCTTGTTACCATG BLAST |
| Tissue | flowers |
| Gene name | LI_gene_64299; |
| Additional information | details; |
| FPAB | abscising flower pedicels |
| FPNAB | non-abscising flower pedicels |
| LF1 | lower flowers stage 1 |
| LF2 | lower flowers stage 2 |
| LF3 | lower flowers stage 3 |
| LF4 | lower flowers stage 4 |
| UF1 | upper flowers stage 1 |
| UF2 | upper flowers stage 2 |
| UF3 | upper flowers stage 3 |
| UF4 | upper flowers stage 4 |
Annotations of Ll_transcript_204427
| Blastp | Rop guanine nucleotide exchange factor 1 from Arabidopsis with 74.09% of identity |
|---|---|
| Blastx | Rop guanine nucleotide exchange factor 1 from Arabidopsis with 72.08% of identity |
| Eggnog | rop guanine nucleotide exchange factor(ENOG4110DIX) |
| Kegg | Link to kegg annotations (AT4G38430) |
| CantataDB | - |
| Mirbase | - |
| Ncbi protein | Link to NCBI protein (XP_019413138.1) |
| Pfam | PRONE (Plant-specific Rop nucleotide exchanger) (PF03759.12) |
| Rfam | - |
| GO | Links to GO: General; Genes and gene products; Annotations; Ontology; Links to GO: General; Genes and gene products; Annotations; Ontology; |