Ll_transcript_204294

Id TrinityFTRINITY_DN56981_c0_g2_i2
Name TranscriptLl_transcript_204294
SequenceGAAGTATTGGACTTTGCTTCTCTCTCTCAAAAAGCTACACCCTTTTCTTTCTCTCTGCTTCTTCTGTGTTCCAAAGGTTTCAAACGGAGAAGAAGAATAA GAAGCAAAGTGTAAAAAGGTAGCTTCAAAGCTTCATTTTTCTCTGCTGAACTGACCCTATTCAATTCTCTTTGAATTTTATGTAACTTGTTTTTCTTTTT TATGATTCAATCTTCTCTTTTCATCAACCCATTTTGTAAGCATGGATGATTTGAACTTTCTTTGTTTTTTGTAAAAATGTAATTTTTATGGACTTTGGTC CACACCCATGAATAAAATTTTATGAATTTTAATGTTGATTATTTTCTCTTAAAAAAAATGAATTTTGGGTTGGTTGAGAATATTTGATTATATGAGGGGT GCATGGAGTTTAGAATTTGATTGTTTTTGTTTTTGTGATTTGTGTTTGTTTGTAGTATAGTATTGTATTGAGCTTATTTTCAGCTCTGAAATCACGGAGA CTAAGTCTTTGTTATTGTGTGGAGATTATTTGAAACAAACCTTCATCCTTTCATTACAAAGAGAAATTTTCCAACTTTTATTTGAATCGACTTTCACCAT GTGATTATCCCTTACCATCCCTCTTTAATCTTATTGTGTTTTCAATCACTTATTACTTATTTTTATTGTTTCACTCTCAAAAACTAAATGATTCTGAGGG ACTCAATTTCTATGGTGCTTCCTAAGAGAAGTTGCTTTGCAGTTTGGCTAATCATGTTTTTTCGCGGTTGGCTTTGATCATCACCTAATCATATTTGAAA GGAATAAACAAATGATGGATGAATATTCTGGTAAAAGAACTACTGGTGCGGTGGTAGTTCCGAGAAAGGGAATGGGCCATGTCTTTAGAGATACTGCTAA TACTAGAGACCGGAATGGTCAAGCTTGCAACCGCCTTGGTTGCAGTAGCAGAGTTAGCTCTCCTAAAGGTGCTCAAATCGGCTCTTCTGAGAAAGGTAAA TCTCTGAGACCTTCAACCCAATCCTCTTCTAGTGTCAAGGAAGCAATGGGAAGTTCCTCTAGAACTTTCACAGGGACTAGTAACCCAGGAAAAACCTTTC TAAGGCCTCGGAAAACTTTGTCCTCTCAAGTAGAGGGAGATTCATCTGAAACAAGTAGCATACAGGATGAACCAGAACCTTCAAACCTTGTCCCTCCACC TGAAAATATTAAGAGAGGGCTTCAAGCGGAAGTGGAAAATTCAGACTCTAGTGATGTCATGCCAATGGAAGCAGGGAGCTCTAGTGTAGCATCTAATACA AGATCTCGGAGGAATTTTCAGCCAAAGCCTGGATTGCGTGCTCAAGAAGTTAAAAGTGTCGGTCAAATTGTGCGTGCGGGTAACAGTAGGCCTGGGATGA GGAACCTCAGATGCAACTCTATATCTGATGTCATCCCATCAGGTGTCTGTTCATCATCTGATTCAACCCTTAACAGAAGCAAGGGTTTGATAAAAAAGAG AAATTGTGAAGGGGAAAGCAGTTCCAGTGCTAGAGGGAAGAACTTAACTGGGCCTTCATTTGAGGGACGGAATTCTGCTTCCAGAAATGGAATATCTATC TCTGATTCAAGAAGATCCAGAAATACTCCTTCCCTCGGGGACAGGCCAGAGAGAAATGTAGCATCAGTTAGGACACGAAGAGCAGTGAGTGGTCAAGCCA GAGGAAGGTTATCCAACCAAGGAAATGCTAATCCTGTGGCACCCAATGACTCTCTTGCAACGATTACTCCTTTGCCACGTTCTGGCGGTCTTAATGCTCC TTGTCTATCACATCATTCTTCTGTGGAGGCTGCTTTAAGTCGTCCAGGCTCTTATATTATGCCAGCTACTAGCAGTGAGGGGTTATATGGTGTTATGCCC ACGTCTCCTTCAGAATATGGCATAACTCGTTCTCTAATAGGTCGGGAGGGCTTTCGACGCCGCTACAATATGGATGGTATTGCAGAGGTAATGTTGGCAC TTGAGAGGCTTGAACAAGATGTTGAGCTAACACACGAGCAAATTCTTATGCTGGAGTCCAACTTGTTCCTTAATGGACTGAGTTTCTATGATCAGCATAG AGACATGCGGCTGGACATTGATAACATGTCATATGAGGAACTGTTAGCTTTGGAAGAGAGGATTGGTAATGTGAGCACTGCTCTCACAGAGGAAGCACTA TCAGAATGTCTGAAGAGAAGTTTCTATCAACCCTCACCCTCAGAGGATGAAGCCGAGAGTTGCAATGAGCATAAGAATGACACCAATTGCAGCATCTGCC AGGAAGAATATTTGGTTGAAGATGAAGTCGGGAGTCTGAAATGCGAGCATAAGTATCACGCGGTCTGCATACAGCACTGGCTGAGGCTGAAGAACTGGTG CCCTATTTGTAAAGCACCAGTAGGGCCTTCAAATTCACCATCTTCATCACATTAATTGCACTGCATTGCATTGTTAGGCTATAGACAAAATTCAGTTTCT ACCCACCTCATTTTCTTTATATTTGTTATCACTTTTGTACAAAATTCAGTTTCTCCTCCTTGCCTTTTCTTATTGGTCATTTGTACAGATATTACATCTC CATTATAACTTAATAACACAAGCCAATGGCTTGATAGACTCAAACATCTTCTTAAACTTTGGGTCCAATAGTCCCATCTAAATAAATGTCCTTCCATAAT GTCTTTTTTAGTCCTCTCAAATGAAGCCTTAAGTATCTAGAAGGGGATGTAAAAAAAGTAGGAAATCAGGCTGTTCTTTATTTAATCTGCATATAGTATA TAT BLAST
Tissueflowers
Gene nameLI_gene_64830; 
Additional informationdetails; 

Expression of Ll_transcript_204294

Labels

FPAB abscising flower pedicels
FPNAB    non-abscising flower pedicels
LF1 lower flowers stage 1
LF2 lower flowers stage 2
LF3 lower flowers stage 3
LF4 lower flowers stage 4
UF1 upper flowers stage 1
UF2 upper flowers stage 2
UF3 upper flowers stage 3
UF4 upper flowers stage 4

Annotations of Ll_transcript_204294

BlastpProbable E3 ubiquitin-protein ligase HIP1 from Oryza sativa with 43.03% of identity
BlastxProbable E3 ubiquitin-protein ligase HIP1 from Oryza sativa with 43.03% of identity
Eggnogzinc ion binding(ENOG41121N2)
KeggLink to kegg annotations (9272591)
CantataDB-
Mirbase-
Ncbi proteinLink to NCBI protein (XP_019438353.1)
PfamRing finger domain (PF13639.5)
Rfam-
GOLinks to GO: General; Genes and gene products; Annotations; Ontology;
Links to GO: General; Genes and gene products; Annotations; Ontology;