Ll_transcript_172442

Id TrinityFTRINITY_DN57031_c4_g1_i5
Name TranscriptLl_transcript_172442
SequenceTACTAATCCTCTTATCCACAAAAATATCATAAAATGATACTTTATTTATTATAAGTGAGGATTTAGCATTACTCCTTATATTATTAGTCTTTGCATTGTT GTTACATAGGAGATGATGATTCATTTACTCAAATAGCAAGTCTAAAAAATTTATTATGTATCTTAATCATTAATTAAAAAAATCTAATAATTTAAACGAG TAATATTAAATTTTCCTATAATCAATGACTATAGAGAAAATAAAAAAAAACTTATTCTTATTGAACTTAATTCTCTACTCAAATTTTGCAACGTTGGGTA GCCGAAAAATAAAATTTTGCAATGTTAGTGGGAGACTGGGAGGCTAGGGCATAGTAATCCGTTACACATAAATGAAATGACAAAGTAGTCCTTTTTATGC ATCATCAGGGTTTTACAAAATCTCCGAGGTTTGGAATAGCAGAAAGGGTTGAGACTCGAGACTGAGAAAGAGCGATGGAAGGTGTATCCTACGCGCGCAT GCCCAGGGTCAAAATCCGCGAACTCAAAGACGACTACGCCAAATTCGAGCTCCGCGACACCGACGCCAGCATCGCCAACGCGCTCCGGCGCGTGATGATA GCAGAAGTACCAACAATCGCCATCGACCTCGTCGAAATCGAGACGAACTCTTCTGTCCTTAACGACGAGTTCTTAGCGCACCGTTTAGGGCTTATCCCTC TGACCAGCGATAGAGCAATGTCGATGCGGTTCTCGCGTGACTGTGACGCGTGTGACGGTGACGGACAGTGCGAGTTTTGCTCCGTCGAGTTTCATCTGAG AGTGAAATGTATGACTGATCAAACACTCGATGTGACGAGCAAGGATCTCATAAGTTCTGATCATACTGTTACTCCTGTTGATTTTAATGACTCTTCTCTC ATTGAATCATCTGATATTAACACTAATAGGGGGATTATAATTGTGAAGTTAAGGAGAGGACAAGAGCTGAAGCTGAGAGCAATAGCTAGGAAGGGTATTG GTAAAGATCATGCTAAATGGTCGCCTGCGGCCACTGTCACTTTCATGTATGAACCAGAAATCCACATTAACGAGGATTTGATGGAGTCCTTGACACTTGA GGAGAAAAAAGAATGGGTTGAAAGTAGTCCTACCCGTGTATTTGACATTGATCCAGTAACTCAAGAGGTTGGGTTTTTCTGATTTGTTTTATTTTGATTG TGTTGGAAAGGTTGTGCACTTTGCACTAATTTCATCACTAATGCTAGTATTACTATTATCTGATCCTTATCTGGTGCTTAGTTGTTGTTGCTATGGTCTA CCTAGTTTGATACCTCACTAATTGCTTCTGAGAAATCTGTGATAATATACTTGTCTGGTATACTATACTGTCTGACACAGCTTTTTTAGATTTTAGGTTG GATAGATCAGATAATATAGAATTAGGCAGGATAAGTACTTGATGGATACTGGATAACTATTATTTCCATTTTCCTGCATCACTATCTATTTGACTTTTTG GGTTGGGTAGAGAAGAAAGTATAATTAGATGTGCTTTTTATTTTCTTTCTGCATTAAAGGATAGACAACTGTAATTTGATGTTTGGAATGATTACGTGGT GCTTCCTGTGAGTAATTTGCTTTCTAATGGTTTTCAAGACTTGTTTTTCAATTGGTTATGGGTATGACCTCTAATATAAGCTTACAGAACCAAATATGCA GCAAGCGAGAGACCATTATTCTGCATATTTTGGGGATGCTAGCTGTCATCTGGACAATAATATATTTGCTTTCAAGAGTATACGCATTAGTATGCTGACT TTTATGTAGGAATTCAAGTTCATCTTGGAGTAAGGATTTTGTTCCGGTGTACATTTATCTTATCATCCTTCATCCGTCAATTTCTTTTTCATCCTGCTTA AAGTTGCTTCCATCACTCCCAATGTTGGAGGCTGAGTAATAGGAAAATTCTTCACTCAGAACTTATAGAAATTGCGCCACTTCATACAGTATCATTCTAG AATATGAACATACTTGAGTGCAGAAAATAAGATGCAACTTAAGTGCCAAAAGTGTAAGAAGAAGAAGATATTGATACACCTTCTGCTAAAGCATTGAAAG TTCTTGAAATTGATGTCTTATCTATGCATGTCAATTACTTTGTGTTGTAAACATTTTTGTCTTTGTGAATTGATGATATATATGATACAGAATAACCATT TCCATCATAATATATCTTTTATCAACTAAAAAACATTTTAAGGTTCTATTTGTAATTTATTGCTATGAATCCTTCCTTGCTGTATTGTGCACTATTATAT TATTAAAACATAAAGATCAAAGTTTGCAATCCTTTGATTGTTTTGTTTGGAGCTGATTTTTTGTGACTAATATTTTAGCATTTTATTAGGTTTTGGTGAT TGACCCTGAGGCATACACCTATGATGATGAGGTGATCAAGAAAGCAGAAGCAATGGGCAAACCTGGGCTTGTAGAAATCAATGCAAAACAGGATAGCTTC ATATTCACAGTTGAATCTACTGGCGCTGTTAAAGCTTCTCAGCTAGTACTGAATGCCATAGAAATTCTGAAGACGAAGTTGGATGCGGTGCGGCTATCTG AAGATACCGTGGAGGCTGATGATCAGTTCGGGGAGCTAGGTGCACATTTGCGAGGAGGATGATCGAATCGATGGAAGGATTTCACTCTTTGTTTTCCTGA ACTTGTTTGTTGCATGTTGTGTTTAACTGAATAGCTGCAGCATGTGCTACCTCATTGAACCAGAGATGCTAATTGTCATTATGGTCCCTTTTAGATAGAC ATTTATCTTTGGAATTTAATACTATATGATATAATCTATTATATTTTTCTTGTGTCAGTTGAGTTTTTGAACACCTTTGTCATATGTAGCATACTTAGAA TACTAGTTAAATGTATTGGTGGCAGAGCTAATTTAGTTATATAATGAATTATAAACAAATGAAATTGTTTAAATTAATAATATTTATTTAGTAATTAGTT TTTCAGAC BLAST
Tissueflowers
Gene nameLI_gene_65234; 
Additional informationdetails; 

Expression of Ll_transcript_172442

Labels

FPAB abscising flower pedicels
FPNAB    non-abscising flower pedicels
LF1 lower flowers stage 1
LF2 lower flowers stage 2
LF3 lower flowers stage 3
LF4 lower flowers stage 4
UF1 upper flowers stage 1
UF2 upper flowers stage 2
UF3 upper flowers stage 3
UF4 upper flowers stage 4

Annotations of Ll_transcript_172442

BlastpDNA-directed RNA polymerases II, IV and V subunit 3 from Arabidopsis with 78.54% of identity
BlastxDNA-directed RNA polymerases II, IV and V subunit 3 from Arabidopsis with 78.54% of identity
EggnogDNA-dependent RNA polymerase catalyzes the transcription of DNA into RNA using the four ribonucleoside triphosphates as substrates (By similarity)(COG0202)
KeggLink to kegg annotations (AT2G15430)
CantataDB-
Mirbase-
Ncbi proteinLink to NCBI protein (XP_019445856.1)
PfamRNA polymerase Rpb3/Rpb11 dimerisation domain (PF01193.23)
Rfam-
GOLinks to GO: General; Genes and gene products; Annotations; Ontology;
Links to GO: General; Genes and gene products; Annotations; Ontology;