Ll_transcript_172835

Id TrinityFTRINITY_DN57038_c10_g1_i1
Name TranscriptLl_transcript_172835
SequenceGTTGCCGAATCATTCTGATTTTTCAATAAATGGAGCAAAAACCGACGACACCGGCGGAAGAAACGGTGGCGATTCCATCGTCCTCCGTGGTAGCCGACGA ATCAAAACCTTCTTCTCTTTTTCCTCTTTTCTCGATACCTAATTCCTCATCTCTTCAGACTACAAATTCGGTTCCTCAATGGCTTTGCAACTCCAGCTTC AACTCCGACGTTTCCCTCATAAACGACGCCGCCGCATCTCAACTCCACCACGAAACCGCCGAATATCCATCGCAAGACGACGACGGAGATAATGATGAGA AGCAACCGTTTCGTCCCTCGTACGAGATTTTGAAATCTTCGGAATCCGACGGAGAGAGAAGGGAGAGAGGGAAGAAGGATAAGAAGAGAAAGAAGAAGAA GCGGAAACATGAGAGAAGCGAACTTGATGGTTACGGTTCGAGAAAGTCTCGCGTTCGAGCTTGGGCTGATTCGGAGACTAACACTTCCAAAGATTATTAC ATTGATTCTCATGGCGATCCTGATAACCTCGCATTCGGAAGTATGTACAGAATGGATATTGCTCGGTACAAATCTTACAATCCTTCGAAACTATCTGGTC TACTACATGTTCGTGGTTTGTATTCGTGGAACCAGACTGGCTCACTCTGGGAAAGAGATGGCGATGTTGATTCATTGGACAGTAAAATGAAGTCTGGTGG TCGTTATTGGTCTGGGAAGTATATTGCTTTGGAACGACATAAGAGCTTTAAGCGTGTTCGTCTTGTTACGCCAAAAATGTCTGCTGCTAGTGCTACGACG CAAAATGACTTCATACCTTTATCAGAGGTTGGGACATCTCATGGAGCTGTGGACAGTGATCCTGTCTCTGAAACTTCTGCAGCACTTGAGGAATCTTGGG AAGATGAAATGTTGAACAAAACTCGGGAGTTCAACAAGCTGACAAGGGAGCACCCCCATGATGAAAAAGTTTGGTTAGATTTTGCAGAGTTCCAAGATAG GGTTTCAGGGATGCAACGACAGAAAGGTGCTCGCTTGCAAACGCTTGAAAAGAAGATTAGCATTCTGGAGAAGGCAGTTGAGCTTAACCCAGACAATGAA GAGCTGTTGCTTTGTCTTTTGAAATCTTATCAAAGGAGAGACAACTCAGATGTTTTAATTGGGAGATGGGAGACAATACTTTTGCGGCACTCTGGAAGTT ACAGATTATGGAGAGAATTCTTGCACGTCGTTCAGAGAAACTTCTCCAGATTTAAGGTTTCAGAGATTAGGAAGATGTACACACATGCAATTGAAGCTTT ATCTGCTTCATGCAGCAAGCACTCTAGGCAGGTTCACCATTTTTATGACCCTTCTTCATCGGATCCTGTCATTGTTCAGCTAGAACTTGGTCTTGTGGAT ATATTTGTCAGTCTCTGCAGATTTGAGTGGCAGGCTGGTTATAGGGAATTGGCTACTGCTTTGTTTCAGGCAGAAATTGAGTTTAGTTTGTTTTGCCCAC CTTTGCTCCTCACAGAACAGAGTAAGCAAAGACTGTTTGAGCATTTTTGGAATAGTGATGGTGCTAGAGTTGGAGAAGAAGGAGCTCTTGGTTGGTCCTC GTGGTTGGAGAAAGAGGAGGAAACTAGGCAGAGAATTATGAAGGAGGAGCTCTCACAAGAGAATGAAGCTGGTGGTTGGACTGGTTGGTCAGAACCATTT TCTAAAGATAAGGAGGGTATTATCGATGTTGAAAATGAAGCCAACAATGATTTGGTTCTGGAGGATATTCAAGATGAAGATGAACATAAAGATGTTGAGC CAGAAGTTGATACTGAAAGTTTGATGAAAATGCTAGGAATTGATGTCAATTCTGGGGATGGCAATGAAGTGAATGAAGTTTCAACCTGGATCAAATGGGC AGAGGAAGAGTCTTCTAGAGATTGTGATCAGTGGATGCCAATTCGTAGGAAATCAGGAACAACCTCTGCTAGTACTGGAGCTCATGAAACAGAAGAAGAT GAGCATCTCTTGAGAACCATATTGTATGAAGATGTGAATGAATACCTGTTTTCCTTGAGCACAGCAGAGGCTCGGCTATCTTTGGTGTCCCAATTCATTG ACTTCTATGGCGGGAAGATATCTCAATCGATTTGCTCAAACAGTTCGAGTTGGACAGAGAGTGTCCTTAGCTTGGAGGATCTGCCAGATTCCATGTTAGA GAAGTTGAAATGCATTCACGAAGTTTTAACACGAACACAAAGCAGTCCCATTGGTTTCAGTTTTGAATTCATATCAGGCAGTTTGTCTAAGAATGCTGGT ATGATGAATTTTCTAAGGAATGTTGTCCTGCTCTGTTTGTCTGTTTTTGCGCGTAATTACGTATTGGAAGAAGCTGTCCTTATTTCTGAAGAGCTTTATG TTACAAAAATGAGTCCTTCTAACTCGATGGTTACACCATGTCGAGCTTTGGCGAAGTCTCTATTAAAAAGTGATCGACAGGATGTATTGCTATGTGGTGT ATATGCAAGGAGAGAGGCTAATTATGGCAACATTGATCTTGCAAGAAAAGTTTTCGATATGGCTTTGTTATCTGTGGATGGGCTTCCTGCGGAGCTACAG TCCAATGCTCCTCTTTTATATTTCTGGTATGCTGAGATGGAGCTTGCGAATAACTCCTATGACATTCGTGAATCTTCACATCGTGCAATACATATATTAT CATGCTTAGGAAGTGGTACGAAATACAGCCCATTTAAAAGTCAGGCATCAAGTTTGCAACTGCTTAGAGCCCATCAAGGGTTTAAAGAAAAAATGAGAAC AGTACGATCATCATGGATTCGTGGTATAATAGATGACCAGTCTGTATCTCTAATATGTTCAGCTGCATTGTTTGAGGAGCTCACCACTGGATGGGATGCA GGTGTTGAAGTTTTAAATCAAGCTTTTGCAACTGTGCTTCCAGATAGGAGAAGCCATAGCTATCAACTCGAATTTTTGTTTAACTATTACATAAGGATGC TTCAGAAACATCAGAGACAATCAAGTCTGGTGAAAGTCTGGGAATCAATTTCTCAGGGCCTCCAGATATATCCCTTCAGTCCAGATCTTCTTAAAGGTGT AGTGGAGGTTGGCCATTTGCACACTACATCTAATAAATTGCGGTGGATGGTAGATGACCTTTGTTACAAGAAACCATCTGTCCTTCTCTGGCTTTTTGCA TTGTGCTATGAGATGTCTAGAGGTGGCACCCAACACAGAATCCGTGGGTTGTTTGAGAAGGCATTGAGTAACGATAGGCTTTGCAGCTCAGTTGTACTGT GGCGTTGCTACATTGCGTATGAATTGGACATTGCACATGATGCTTCTGCAGCTCGACGTATTTTCTTCCGAGCTATCCATTCTTGTCCCTGGTCAAAAAG GTTATGGTTAGATGGGTTTCTGAAACTGAACTCTGTCCTGAATGCAAAAGAGCTATCGGATCTCCATGAAGTTATGGTGGATAAGGAACTGAATCTGAGA ACTGATATTTATGAAATCCTTTTGCAAGAGTCATGATGACTTTTGCTCTCCCGTGCTGCCAGAATTTCGTTCCCGGGAGGGGGCAAGCATGGGTGCTGCC CCCTTACTATATCTTGTAAAATCCTGAGATAACTTTGATTTTATCCTTACATGACAAAGTTTTACATTGTCAATATGATATAATATTATGATTTTAATAT TTATTTTAATGAGGATGAATATGTTTGACTTTCAAAAATCCACACATGGAAGATTTTGGAGGGTTCGAGAAACCCTCCAAAACCTTCACATCTCCTTCAT CCAACTCCCAAACAAGGGGAAGGCTTTCCAAAGCCATCATTTCCCCTCCAAAACTTCACTTCCAGACAAAGCCTAAGGGGTGATAGGTTAAGTGATACAT ATTTGTGTATGAAGAAAATTCTTGCAGAGAGAGGCAGCTATATTGTGGATTTTCTTGGCTTGAATAAGAATGACTCCCATGAATGAAATGTATGGGTAGA AGAAAGATTCGTGAGGTGGGGCATACAGTTCATTTTACTTCTTTTCCTATTTTTACTAATTTAACAAATCAAATGTAGTGATATACATTTTTGGACAATA AATTTTATTAGGAATATAGATTTTACATATTATTTATTTGTCTTTATTTATGTATTACTTCAATCGTATTATTCTAATAAGTTTAT BLAST
Tissueflowers
Gene nameLI_gene_65273; 
Additional informationdetails; 

Expression of Ll_transcript_172835

Labels

FPAB abscising flower pedicels
FPNAB    non-abscising flower pedicels
LF1 lower flowers stage 1
LF2 lower flowers stage 2
LF3 lower flowers stage 3
LF4 lower flowers stage 4
UF1 upper flowers stage 1
UF2 upper flowers stage 2
UF3 upper flowers stage 3
UF4 upper flowers stage 4

Annotations of Ll_transcript_172835

BlastpProtein NRDE2 homolog from Homo with 25.37% of identity
BlastxProtein NRDE2 homolog from Homo with 25.02% of identity
Eggnognrde-2 necessary for RNA interference, domain containing(ENOG410XPGD)
KeggLink to kegg annotations (55051)
CantataDB-
Mirbase-
Ncbi proteinLink to NCBI protein (XP_019430340.1)
PfamNRDE-2, necessary for RNA interference (PF08424.9)
Rfam-
GOLinks to GO: General; Genes and gene products; Annotations; Ontology;