| Id Trinity | FTRINITY_DN57088_c4_g1_i3 |
|---|---|
| Name Transcript | Ll_transcript_172779 |
| Sequence | GCTAGATATTATGTGCACACGTGTTTGCAAAATGTCAGAGGTTCAAATCCTAGAAATAGCCTCTCTGCTTGAGGAAGTAAGGCACATACATCTACCCTTC ATATACTCCACTAAGTGGGAGCCTCATGCAGTGGACCGTCCTTTTTAATATATTTGCATAATGCTGCCTTATTTACAAATTAAAACACTACTATTTGTTT TTTGACAGAAAAAAGGGTTGTTATGAAACAATAATCATGTGTGTGCAAAAATATGGCTTATCACTTATTTCATTTTGAAGAAGTTGAGCATTTCAGCAAC GATAACAGTGAGCATGGAAATGGTTTGGGCTATAAACCCTCAATTGTATGGAATGCATCATACTAGAATGCCTTTGCCACTTGAAATGGAGGAGGAGCCT GTTTATGTTAATGCAAAGCAGTATCATGGTATTTTGAGGCGAAGGCAGTCACGTGCTAAGGCTGAGGTCGAAAAGAAAGTGATTAAAGCTAGAAAGGTAT GGTTGATATCTAAATTAGTAGGAAGGGGCCACTGCTATGATTTTTTTTACAATGAAACAGAAATGAAGGAAAATAGCGGTAAAAACAAATTTTGTTTAAA GCAACAGGTTACTTTTTGCTGGATTAGTAGAAATTGTGCATTCATATTCCTTCCTTCCTTGTATTGGGAGGAAAAACTTACCCTGATTTGGTTCAATATA TTCCAAGTTATGGCTTGCATTATGCTTCATATTTCATTTCTTTTGCCTTTCATTCTTGTGTTGGCAAGCTACTTGATCTTTCTCAGTATGATGTATAGAT ATAGGCAATGGAAGATTATTTATCATGTTTTATTTGCTGGACTGCCGATTTTAGTTTCGTTCTCATGATTTCTTTGGCTATTTTGCTTCCGATTAGGTCT ACTTCTTGTGGCTATGTGATAGAAAAGACAATACTGAAAAATGACAAAATTGAGAACTCAGTATTGTCTGTGCTAAGATTCCCTTCGGTGGAAATGATTA TTAAAGAAAGGAAAAAGCATAGAAAACAGGAGGATATAAAAATACTTGGAAACAAAATTTCAATATAAACTCATTTTGAATGTAACAAGGCATCAAATCT CGTGCTAGGCATAAAAAACAGGAGGAGATAAAAATATTTGGAAATGATTATTGTTTGTTTGAGGATGAAAGCAGTGCTTTTGCTTTTACTTATTTTTTAG GGTGAGGAAATCTTCCATTCCGAGATTATTACTATCATGAATCATTAGTTTTGCCTAGACGGTGTCCATGTCATAGGATATGGTTGCAATAGAGGGAAGA ATCATGTAGCAATAGAAGATTTGGCAACACTGACCACAGATCTTGGTTATGTATTTGAAAATGAGGGGTTATGCTATTCAATAATTAGCAACATAATAAC ACAACTGTCTATTCTTTGCAATATGTCTTACGCAAGACTTGTGTTTCTTTTGCATTGAAATTAATGTTAAAATTTGCTGTGGCCTGAAAAGGAACCCCAA GTTACTTTTGTGGGGCAAAAACACTTCGGGTGGAAGTTTTGATTTTTATTAGGCCTGGAGAGATGGTAGGAGTTGAGGATAAAGGTCAAGTGGGTTATTG ATCAAAACACTTTCAAGTTTTACAATTAAGCGTAAAACATGAGGCACATAGTGGATGGTTAGGTGGAACATTTTTAGTGGAAGTTTAAATGAATACTGTG AGTAGGATACTCTAATCATTCTAGTCATCTGAAAACAAGTTGAGCTGACCGTTGAGCCTAGAATTTGTGGTTTCCGTAGACATGATTATATTCTAGGGAA ATATCACCTATGAGGATGACCATGATGCTTTTTTTGGGGGCCTTCACCATGATTTGAATCTAACAGGGCCGTATCTGCATGAATCCCGTCACCTACATGC GCTGAGAAGGGCAAGGGGTAATGGAGGTCGCTTTCTCAATACAAAGAAGCTTAAAGGTAACAGTTCTGATGGCACCATAAGCAACAACAATGGTGCACAA CCCTTAACATTATCTGGCAGCTCATCTGCAGCTCAACATTTGGTTACCAACAACGGAATTCTCGTCTCATCAAATGATCAGTATGGTGCATCACAGTCCA TAGTTGAGGACATGCATCAGGTGCAGAGTTTCACCATTGGTTACCATGATGGCAATGGTCTTTCATCACCATACTATTCACAGTTAAATGGAAAAAAAGA TGGAGACTGCTTTGGTAGAGAGAGGGAAAGCGTGCGCATGCATGGAGCCCCAAACGGGGCTGTAAAGTAACATTCCCTCGGAGTTGGTGGTTTTCTCTCT GGCATATATGGCAACAGTTAGGTGAAGATGAAGGTCTCTGTCTAATCCAAAAGTTGGAGGAAACCACCCTTGTGTTACAGTAATTCTCAGGCAATTCATT CTTGGCTCAGTTACTTAGATCAAAGTGGTGAGATCAGCAAGGAAGATTCATGGTACAATCCACTCCTTGTTTGGTCTCCCCTTGTTTCCTATTCTCTTCA TAAGTCCACTTGTTAAATGGATTAGAGAGAAAGCAAAAATAACATTGGTTTGTGAACTTTTTAAGTTGATATAATGGTGAAAGTTAATGTGTGAAACTGG ATTTGGAGGTTATTGAACTGTAAACAAATTTGTATGACACATACTGCACAATTGTGTAAACCTTCTTCCCTATTCTCTATTTGTCCTTAATTGTTGTGTG TAGGAGTTTTTCATGGATGTGTTTGTGCAACCATATGAAATTTGCTAGCCTATTATTGTTGTAGCTCTTGCATGCCCATAATCTTGATATTGTTGCATCC TATAAATGTGGCAAGTGTTGAAGTGAATGAATTTAAAGTTGGTGAATAAATCTGCC BLAST |
| Tissue | flowers |
| Gene name | LI_gene_65724; |
| Additional information | details; |
| FPAB | abscising flower pedicels |
| FPNAB | non-abscising flower pedicels |
| LF1 | lower flowers stage 1 |
| LF2 | lower flowers stage 2 |
| LF3 | lower flowers stage 3 |
| LF4 | lower flowers stage 4 |
| UF1 | upper flowers stage 1 |
| UF2 | upper flowers stage 2 |
| UF3 | upper flowers stage 3 |
| UF4 | upper flowers stage 4 |
Annotations of Ll_transcript_172779
| Blastp | Nuclear transcription factor Y subunit A-9 from Arabidopsis with 73.08% of identity |
|---|---|
| Blastx | Nuclear transcription factor Y subunit A-5 from Arabidopsis with 55.56% of identity |
| Eggnog | Nuclear transcription factor Y(COG5224) |
| Kegg | Link to kegg annotations (AT3G20910) |
| CantataDB | - |
| Mirbase | - |
| Ncbi protein | Link to NCBI protein (XP_019449593.1) |
| Pfam | CCAAT-binding transcription factor (CBF-B/NF-YA) subunit B (PF02045.14) |
| Rfam | - |
| GO | Links to GO: General; Genes and gene products; Annotations; Ontology; Links to GO: General; Genes and gene products; Annotations; Ontology; |