| Id Trinity | FTRINITY_DN57106_c3_g2_i1 |
|---|---|
| Name Transcript | Ll_transcript_100112 |
| Sequence | AATTGGTCATTGATTTGTATAATGTAAGAAATTAATGTATCCTTTATTCCTTTAACTTTTATACCTTTAGACCTAACTGAATATAGATGATGCATATATT TGTGATTCTGGTGCTGCAGTTACTACTATTTCACCTTAATGATTATATTTGTTTTTTCTTGGTTGTAAAACAGAAATATTATAGGTTTATCCTTGATGGG TTGTGGAAGTTGTAGTGGAACAAAAGTAAAAAGAAATGATTGAATTTGTCAACTTACAGTATTTGTTAGAACAAGGTTTAGTCTTTTTGTGGTCGTCTTT TTCTCTCCCCTCGAATAGATATAAGAAGCATTTTCAGCTTCATAAGTTACATTTCAACTGCAAAAAGGGCAATGGTAGTAAGTAGTAACAATCACAGGAA AACATTGAATAAGAAATCTGATTTCCATTTCCCCTTATTTCCATTTTCTTTATTTTTTCAGATTATTCTTTAATCTACTTGATGAATAAAGATGCAAAGT GGTGTTAGAATCACATGCCAGAGTTCATTTCAAAATGAGTTTTCCTTACGGACACGCATATAACTTACTAGAAAAAGAAAGGATATCAAATTTCTTGTGC AGCATACTACCATTCATAAAGTATTTCTATGTTTGATATTCTTTTTCTTGTCATGTGTGTGTATATATAAACATGCAAGTGTGCTTAAAATTAAGATTGC CTACCATTTCTTTCTTCATCGGTGAATATCGTGCTTGTTTATTCTCCACAATTCTGTTGTATCGACATTTTAAGTAGTGTGTAGATTTTGTTGGTATCAA TTTAGTTGTCTTATTATGCCCTTAAGTTGTTTCTTTTTTCCTGTGCCCATTTTGATTTCCAGAATTTTGGTTTTGACGGCAAACTGGTGGTCAACTATGC TTGTTCCATGGCATGGGGCTAACATTGAACAAAGCTTGAAATCTGTGATTCTGTTCATTACTAGTTCAGAGTCATCTTTTGATATCTATTAAAGAAACTT GTCATAGATATGGGGCATGAAAAAAATGTTTGTAATCCTAAGTTCCTAGAAAATGCGGCATAGGGGCTCTCACCTAGTAGTGTCTCTGAGCCAGGTGGAT GTACGTTTTCTTACCCTTGCAAATAACGAGATTTGTTTGTGGGATTTGAACCCATTAAATTATCAGAGAGTTTAGTATATGTACATTGCAGTTATTAATA AATGATGAGTATTGAACAGGAACACTTGAC BLAST |
| Tissue | flowers |
| Gene name | LI_gene_65892; |
| Additional information | - |
| FPAB | abscising flower pedicels |
| FPNAB | non-abscising flower pedicels |
| LF1 | lower flowers stage 1 |
| LF2 | lower flowers stage 2 |
| LF3 | lower flowers stage 3 |
| LF4 | lower flowers stage 4 |
| UF1 | upper flowers stage 1 |
| UF2 | upper flowers stage 2 |
| UF3 | upper flowers stage 3 |
| UF4 | upper flowers stage 4 |
Annotations of Ll_transcript_100112
| Blastp | - |
|---|---|
| Blastx | Ubiquitin-like protein ATG12A from Arabidopsis with 90.48% of identity |
| Eggnog | Ubiquitin-like protein involved in cytoplasm to vacuole transport (Cvt), autophagy vesicles formation, mitophagy, and nucleophagy. Conjugation with atg5 through an ubiquitin-like conjugating system involving also atg7 as an E1-like activating enzyme and atg10 as an E2-like conjugating enzyme, is essential for its function. The atg12-atg5 conjugate functions as an E3-like enzyme which is required for lipidation of atg8 and atg8 association to the vesicle membranes(ENOG4111ND7) |
| Kegg | Link to kegg annotations (AT1G54210) |
| CantataDB | Link to cantataDB annotations (CNT0000109) |
| Mirbase | - |
| Ncbi protein | Link to NCBI protein (XP_017405888.1) |
| Pfam | - |
| Rfam | - |
| GO | Links to GO: General; Genes and gene products; Annotations; Ontology; |