| Id Trinity | FTRINITY_DN57106_c4_g2_i7 |
|---|---|
| Name Transcript | Ll_transcript_100133 |
| Sequence | GAAAAATAAAGCCTCCACCACCACTTTTCCCTATTTCTTCATAACCCCTTATGGCATTACAACTATCTCGCATAATTCCAACCTTTCACATAATTTCTCT TTCGAAAGTTTCAATTTTTATTATCCCCTTTTGGATTCACTCCCTAATCACATAGCTCCCACTTTCCCCAAAATTCATGGCAACAGACGCAACAACCAAG TTCAAAAACCTCGATTTCCTTCCCGATTCCCACACCGATGAACTAACGCCGTCAACTCACGACGGCCTCCACTTCTGGCAGTTCATGATTTCGGGATCAA TCGCTGGATGCATTGAACACATGGCAATGTTTCCCGTTGACACCGTTAAAACTCACATGCAAGCTATTGGTTCTTGCCCTATCAAATCCGTTACCGTCCG TCAAGCCCTAAATTCTATCCTCAAATCTGAGGGCCCCTCCGCCCTTTACCGCGGCATCGGCGCCATGGGCCTCGGTGCTGGACCCGCACACGCCGTTTAT TTCTCCGTTTATGAAACTTGTAAGAAACGTTTCTCAAATGGGGACCCTAATAACTCGTTGGCGCATGCTGGTTCTGGTGTTTGTGCCACGGTGGCCAGCG ACGCGGTGTTTACGCCGATGGATATGGTGAAGCAGAGGCTGCAGCTGAGTAATAGTGGGTATAAGGGGGTTTGGGACTGTGTGAAGAGGGTGATGAATGA GGAAGGGTTTGGGGCGTTTTATGCATCGTATAGGACTACGGTGTTGATGAATGCTCCGTTTACTGCGGTGCATTTTGCCACGTATGAGGCTGCGAAAAAG GGACTTGTCGAGGTTTCGCCGGAGAGCGCTGATGATGAGCGGTGGGTTGTTCATGCCACGGCTGGTGCTGGTGCTGGTGCTTTGGCTGCTGCAGTTACAA CTCCACTTGATGTGGTTAAAACTCAATTGCAGTGTCAGGTATAATTACAATGACTGTTCATTTTTTTTCGTCAAATTTATACTGGTATAGAGGTTTTTTG CTGTTAAAGCAAGTTTATTTAGCACTCTAGGCTTTGAAATTGATTAGGCGAGCATAGGAAAAAGGTTAGTGATAGCTATACAGAGAAGAAAAACACTTAA GAGGTCTCACATGTTTCAAATTAACCAATTGGCAAACCAATTTCACCCCTTATTGGTAAACTGTTGGCTGATTACACCTAAGCATATTGGCGTTCAATCA ACTATAAGCAGTTCAATTTGTTTTGATAATTTGGTTAGTTTTACTTCTTTCGGGTCTCTGGATTTTGGTCTGTGTAAGTGTGACTAACAATACTCATTGA GTTTATCGAGTGTGTTGAGAAGTGTGAATAAAGGAGTGGATAATAGTATCTTATCAAACTTTGAGAGTGTATTACTTACATTTTTGGAATGGGATTTTGA TGTCCTTACCATGAAACTTTCCTATCATTTCTAGTTGTCAGTACATAGGTATCTGTTCTTCAAATAACAACCACTTTATTTTATGTTGTCAGTTTTGGTA ATGTTGGTTCCTTGGACATATTATTTGTGCTTCTATAAGGTTTTCGTATGAATCTGTTCTGCTACACTGCTGGAGAATCTAGTGAGAAAAATGAATCAAA TGGGTAATATTCGAATTAAAATTGGTTGAGGAAAACTTAAGAAAACTTTAGGAGAGCAACAATTTGTTAGGAGTAGACAGTATTTTTTACTGAAATATTG GTTTTTGATTGATGTTAATGCAGTCAATTTGGCATATGACTCGATTGTTGTTAAAATGGGGGTAATAAGACATGTTCAACATATTGTTAACATGGCATGG ATGTGAAGTATATAGATTATAGAGTCACTAGGGAGTAGGGATCAAACCCGGCCTCATGTACTTCACAATGAAGTTGAGCTCTTGGGTCTTCGCTGCTTCA CGAGTGTCACTATCTAGGATTGGAGAGAGGTTGGCAGCCTGTTGCATTGTTAGTTTTTTTTCCATGGATCTATTCTTTTCTGTTTTTAGGATTTCTTTTA TCCTCCTAATTTTTCTTAGTCTCTTTCTTCATCAATGAATTTATCTGTCTAAATAAAAAAGAACAACGAAGCTGGGTGCAAGTAGGTTTCTAGGCCCTTA GCACATTCTCTAAGGAAACTATGTAGTATTAGAATGCAAAATGTGTTAAATAATATTTCTGGCACTAATGGATTTGGGTAGGAACCCTATCTGTTCCTTA AACATTTCTTCCCATTTCAGAATATGGAACACCCCATCAACCCAAATTAAAGCTGTTAGTTTATCTATAGTTGGTGTTATTTAGTATAATACAAAAGCGA GATGATAAAACTGAGACTTCACAAATGATAACTGAGTAAAGATACAAATAAGAGAAGAGTTCTACTCATGTTAAATGTTGGAATATGTGAGGACTGAGTT GCAAAAAAATAGAAAGGAAGTTCTATCTGAGTTCCCGTAGACCTGGTGACTTGAACCTAGGATAGTGCTTTAGTCGGGCAAAATGGGGTTGAACTGAAGT GACTGAAGGTGACGGTACTAATGACGGATGTCACATTTGAATCGTTAAGTGTTCCTTTTAACTGTTGTTACATTTTTATTTTAACCTTCAATTGGGGCGA CTTCACTTTGTAATTCTCTAGAATGTTTGAGGAGTTATATCCTCTTCCTACTACTAGCACGGGAATTGTTTTGGGTTTATAAGGCCACAAATATATTTTT CAATGAAAATAGAAGGTTCCAAAATTAGCTTGTGCTTTATACAATCTTGTCATGAATTTGATTTATTTCTTGTAGTGCGTAACATGGTCTTCGACCAAGT TGATACTTTATTTGGAAATTAATTGTGCAGCATCTTTTACAGTATGAATGTTTGTTCCCTTCGATATGAATGAAATCACGTAGCAACTTTTCAAAGTTCT GTCTTTCATTTCTCTGGAATGTTTATCTTCACATTGGTTGATGGTGCAGGGTGTTTGTGGCTGTGATAGATTCAAAAGTGGTTCAATCGGAGATGTTATT AAAACAATTTTGAAAAAGGATGGATACAAAGGGCTCATGAGAGGATGGATTCCAAGGATGCTCTTTCATGCTCCTGCAGCTGCAATCTGCTGGTCAACAT ATGAAGCTGGAAAATCCTTTTTCCAAGATTTTAATCAACAGAAAGACGCTGGAACTGTCACTTAAATAACAAATTCGACTTCAGAATACTCACCATGCTT CGGTTCCATAACAGATGTTTGTTTATTTGTGTCTGTCAACTTGATATAGTGTTTCAAAGAGTTGTGAGTGCTAGCCATCAGAAGTCCTTGAGTTCTGAAT AAATACCAGGCTAAAAGTACTCTTTCTTCTTTATCTTATTTTTAGGAGGAAAATAGTATTTAGCTAAATACTGCAATATACTGATATGTCAAACTAGGAT TCTTTTTATCATATACATTGTCAACTTAAGAGTCCATTTTATTTAGCCTCTTGTTAGTTTCATTTGGAGTTTTGGACAGAAGATTCCATGAAAACACTCA ACACATCATGAAACTTATTTCATAGCTTCATGACAAATTGACAATGTAAGGTTTAATTGAGAAACGTTATTTGGATTTTAGACTTCACACGATGTCTTTT CCAGCCAACTACTATTTTGTTTTTTATTCGTCTTGGAACTGTTGTTGGTTAGTGTATAATTTTTATATTTGATCAGCTTTTGGGATATCAGACAGATTAT TATGTGTGATGTGTTCTCCATATTTTCCCTGATATAATTATATAATCATATTTCAGTATTTC BLAST |
| Tissue | flowers |
| Gene name | LI_gene_65894; |
| Additional information | details; |
| FPAB | abscising flower pedicels |
| FPNAB | non-abscising flower pedicels |
| LF1 | lower flowers stage 1 |
| LF2 | lower flowers stage 2 |
| LF3 | lower flowers stage 3 |
| LF4 | lower flowers stage 4 |
| UF1 | upper flowers stage 1 |
| UF2 | upper flowers stage 2 |
| UF3 | upper flowers stage 3 |
| UF4 | upper flowers stage 4 |
Annotations of Ll_transcript_100133
| Blastp | Mitochondrial RNA-splicing protein MRS3 from Saccharomyces with 40.74% of identity |
|---|---|
| Blastx | Mitoferrin from Dictyostelium with 43.23% of identity |
| Eggnog | - |
| Kegg | Link to kegg annotations (YJL133W) |
| CantataDB | - |
| Mirbase | - |
| Ncbi protein | Link to NCBI protein (XP_019462230.1) |
| Pfam | Mitochondrial carrier protein (PF00153.26) |
| Rfam | - |
| GO | Links to GO: General; Genes and gene products; Annotations; Ontology; |