| Id Trinity | FTRINITY_DN57107_c1_g1_i2 |
|---|---|
| Name Transcript | Ll_transcript_98240 |
| Sequence | CCAATGAGTTTCGTTAACCATTTCTGCTGCTCTGGTGTCTGAATAGTCTGGGTCATTAAATTTTTTAGGCTTTTGTGATTAATATAGACATGAAAGGTAT TTCCCAATAAATGTTGACATTATTTTTTATTGCCTCTATAACAACAAATAATTCTCGCACATAGGCAGAGGATGAACATAACTAAGGGCACATCTTTCGG CTAAAGAATACAATTGGGTGACCTTGTTGGGAGAAGACATTTCCTACTGCCACACTAGAAGCATCTATGGTGACATCAAAAGGAAGAGCAAAGTCAGGTA ATGCTAGAATTGGCAGATTTGTCATAGCATTTTTAAGTTTTGTGAGTGCTTCATCCGATGTAGAAGACCTTACAAGTGTAGGAGCTTTAATAAAACCAGT TAGTGGACTTGCACTATAAGCACAATGTTGCACAAATTTCTATAGAATCCGACGAGGCCAAGGAAAACACATAAATCTAGGAGAGCATTAGGTGTTGGCC ATGCTAGAATAGCTTGCACCTTCGTAGGATCATCTTGTACTCCATTCCTTAAAATTATATGGCCAAGATAATCCACTGAACGAACACCAAAGTTACACTT AGAGAGTTTAGCAAAGAATTGGTTTCATACAATGATTGCAGAACATTTTCTAAGTCAATCAAGTGGATAGACCAAGACAGACTATATATAATGATATCAT CAAAGGACAAAGCAAGTCATTCATTGCCGCTTGGAAGGTGGATGGTGCATTAGTTAGGTCAAAAGGCATTACCAGGAATTCATAATGTCCATCAAAGGTC TGAAAACCAATGTTAGGAATATCCTCTTGAGCCAACCAAATTTGGTGATAACCTGAGCGTCAATCAATCTTGGAGAAAACTTGGGAACCCTTCAATTCTT CCAACAATTCTTCAATTGTAGGAATAGAAAAATGATCCTTAATAGTGATAGCATTGAGCGATCTGTAGTCTACACAAAAACGCCTTTATCCATCCTTTTT CTTAACCAAAAGAACTGGGGAAGAAAAAGGACTGTTACTTGGACAAATGATGTCATCCTTGAGCATGTTTGTAATCATTTTAGTCATGGATTCTTCTTGA AAATGAGGGTATCGATATGGTTTAATATTCACAGGAGGTGAATCTAGTTGTAAATGAATATGAAGATCTTGGGGTCTTCTGGGTGGTAAGCCATGTGGAA TAGAAAAGATATGGGAGTACCATAAGGGAAGGGTTTTAAGAGCAACGTGCAATGAATCTAATTATTAGAATCATTTGGAGATAAGGACTGTGTTATAGAT GAATGGGAAATGTGTGATTGGTGGTCAGTAGAGAGCATGGTAATTGTGTGAAGAGTGGCAATAGAGTCAGTATGGAACATACAATTTAATTGAGGAAAAG TGGCAAGAGATAATAAGGGAAAAGTCATACCAATAACAGTGATAAGATCCCCGTTGTGGTAAAATTGCATAAAAGGTATGGTGTAATCAGAAAAAAATTT TCCTAAAGTTTATAACTATTGTGCCCAAGAACTATGTCAACCCCTTGTATAGGTATAAGATAGAATGATACTATGAAAGTATATTCTGCAACTCTGAGTG GAACATTTGAACATAGGCCAATACATTTTAAATGGTCACCATTGTAGACCATAACAGAAAATGAAAGCAATTTTTGAATGGATAAATTCAAGAAATCAAC CACTCGAGGTTGAATGATGTTATGTGAACTTCCTGGGTCAACCAATATGGAAACAAAATGCCCTTGTATGTGAGCATAAAATCTGAGTGTTTGTGGTGAC GGTTGCATAGAAACTACTTGTAGGAAGAGGTGGAATTGATCAGATTTTGGTTCGTATTGTGTAGTGTCAAAATTGGTGAAGAATGGTTTGGATTGTGTAG TGTCAAAATTGGTGAAACAGAAAATATCCTCAGTAGAGGAGTTAGCACCAGGGTCTGGTGGTTCATTGTGAGCAAACAAAAACAATGGGCTAATCTTATA ATGGTGGCCATGATGGTATTTCTCATCACAATTGAAACATAATCCTTTGATTCTGTGGGAATCCATTTCAGTTCGGTTTAATAAACGAATTGGTGGTGTA CTTTTGGTGATGGAAGGTGGTATGGTTAAGGGTAATGATGGTTGTGGTGCATTTGGTAAAATAGTACGAGGTTGTGGTGGTGGTGTGGGTAGTATAGGTG GCATAGATCGAGGTTGAGAAGGGCGAGGAACATAAGCTAAGTTTGTGTGTGAGACAAATAATTTGGTTTCCACCAATTTGGCCAAACTAATGGCTTCCGA AATAGAATTAGGATGCAATATGGCTAATTCATTTTGTATGTCAAGGTGTAAACCAAAAATGGAGGAGTCCAAAATGGAATGAGGAGGCAAGCCAATGACA TAGTTGCACAAACGTTCAAAATCACATTGATAATCTGAAACTGATGTGGCTTATTGCAAATTAAATAATGCTTGTTGATGATTTTCATATGCAGATGGCC CAAATCTAAGTTCCAAAGAATGCACAAATTCCTCACAAGCTGTAAGCAAATGGTTGTTATGCATCCATTGGTACCAACCAAGTGCATCTCCTGTCATATA ACAAGAAATTTTGGTGAGACGGTTAGGAGGAGTGATTGAATAATGATAGAAATATTGGTTGGCATGGAAGATCCTTTCCATTGGGTTAAATTCATCAAAA GGATGAAGGGTCAATTTAGGGGGTTTAATGGTGTTGTCTCTGTTTGGTGGAGGGGGAGGAGATGTTTTTGGTTTAGGTTGTAAATTCTGAAAGTTCTGTA AATAGGATTCATGGTGGAGATCTTGGTGAGTTTTGAAATCATGGAAAGTAGTAGTGAGGGATGCAATTGAGTGTTAATGTTGCTACAAGTCTTGTGAGCG AGTATTTATGGTATCAATGATGAAAGCACTAATGGTATGTTGATGAGTATGACAATGATGTTTATTCCAATTTGAGAAGGAACAAGTCTCCTAAGAAAAG AAAGGAAGAATGTAATCTTGTCTAAATAATAGTTTCCTTATTCATTTCACAACAACAATATTATATAACCAATACAAATAACTTATTCCCTAAGATTAAG GATCAGATGACAGTTTCTTTATAACCTACAAATTTAAAACTGTAACTTAATAACTAACTATTACATTTATTTAACATAATGTGCATGATGTGTAGGAGGC TTTGTCACACGTTTGGGTTTATTTGCAGCAAATGAAGACCCAATCTCAGCAATACTTCTTTGTGCAGTAGGCCCCTCCGTATCAATGTACTTGTACAAAT GTTGTATCCAATTTACGAAAGAGATTGATAAGATCGAATCAAACCTAAAAAGACTTAATATTCAAATTCTTCTTCGAGATTTTGCATTACCTTACTATTT TCTTCTCTATTGTAGGTAAAACCCCATTATCTAACAATTTCTTCAAAGATTGAGAGGGATATTTGTACTTCGTAGTATCCTGAGGAAATATTGTAGATTT AGATGGTGTGAAACAGAGATTCACTATCCCTTTTTCGGTTCTCTACAAAAATTGCTAGGAAAATTAACTTGTCTTAATGAACAAGTACAAGCAAGATTTG CACAATGACAAAATAAATGGAAAAGGAATAGATTTCGATGTAAATATTGCCATCCTACTTCTATAAAGATGATTAGATTTTAGATGCATTTGTGGCTTGT GATTGAAGCTACAAAATTTGATGAGTACTCAAATGTATTATTG BLAST |
| Tissue | flowers |
| Gene name | LI_gene_65896; |
| Additional information | details; |
| FPAB | abscising flower pedicels |
| FPNAB | non-abscising flower pedicels |
| LF1 | lower flowers stage 1 |
| LF2 | lower flowers stage 2 |
| LF3 | lower flowers stage 3 |
| LF4 | lower flowers stage 4 |
| UF1 | upper flowers stage 1 |
| UF2 | upper flowers stage 2 |
| UF3 | upper flowers stage 3 |
| UF4 | upper flowers stage 4 |
Annotations of Ll_transcript_98240
| Blastp | - |
|---|---|
| Blastx | Retrovirus-related Pol polyprotein from transposon 297 from Sophophora with 40% of identity |
| Eggnog | - |
| Kegg | - |
| CantataDB | - |
| Mirbase | - |
| Ncbi protein | Link to NCBI protein (XP_020222267.1) |
| Pfam | Retroviral aspartyl protease (PF08284.10) |
| Rfam | - |
| GO | - |