Ll_transcript_100508

• Id Trinity: FTRINITY_DN57112_c1_g4_i3
• Name Transcript: Ll_transcript_100508
• Sequence: CAAGACTTTAATATTATGTTAACGTGTGTCTCTCTTCTCTTCCCTCCAAACTCAATTAACAGTACCCAATTTCCCTTCTTTTCAAAACCTGAATCTAAGC GTTGTTACTTTCTTCACAATCCACGGACATGGATTCAGTACAGTTATCAATGTCAGTTCAATTGGGTCGGATTCGGACCCTGAAAGAAGGGTTAACCCAT TCGGATGGAAAACCGGGTCCCGTTGTATATTGGATGTTCAGGGATCAACGGATCAGAGACAATTGGGCTCTCATCCACGCCATTCATCAAGCCAACAAAT CTAACGTTCCTGTTGCCGTTGTTTTCAATCTCTTTGATCAGTTTCTTGGCGCCAAATCCCGTCATTTAGGGTTTATGCTCAGAGGTTTGCGCCAATTGTC GCACCAATTGCGAAACAATCTTCAAATACCGTTTTTCTTGTTTCGCGGAGAAGCAGAGGAGACTGTACCAAAATTTCTGAGAGAATGTGGAGCTTCATTG TTGGTGACGGATTTTTCGCCTTTGCGAGAAGTGCGGAGGTGCAAAGAGGAGATTGCCAAGCGGGTAAACAGTTCGATTACCATACATGAAGTGGATGCTC ACAATGTAGTACCCCTTTGGGTCGCCTCTGATAAATTAGAATACAGTGCTAGGACCTTAAGGGGAAAGATTAACAAAAGGCTTTCTGAGTATCTTATTGA TTTTCCTACAATTGAACCACCAACTAGGAAATGGGTCACCCCTGGGGAACAGTGTATTGACTGGGATGACCTCATTGCTGATGTATTGAGGAATGGAGCC GAGGTTCCTGAAATTAATTGGTGTGAGCCCGGAGAAATTGCTGCAATGGAAGTATTGATGGGAAATGAAAATGGATTTTTGACTAAAAGGTTAAAAAATT ATTCTGTAGATCGCAACAACCCATGCAAACCCACTGCCCTTTCTGGTTTATCTCCCTATTTGCACTTTGGACAGATATCTTCTCAGCGGTGTGCTTTAGA AGCACGCAAGTTGAAAACTTCACATTCTCAGGCAGTTGACGCTTTCTTGGAGGAGTTGATTGTGCGGAGAGAACTTGCTGATAACTTTTGCTTCTATCAG CCACATTATGATTCATTACAAGGAGCATGGGAGTGGGCTCGCAAGACCTTAATGGATCATGCCACTGACAAGCGAGAACATATTTACTCGAAGGAGCAGT TGGAGAAAGCCCAAACTGCTGATCCTCTCTGGAATGCTTCTCAGCTGGAGATGGTTTACTATGGGAAAATGCATGGTTTCATGCGAATGTACTGGGCAAA GAAGATACTTGAGTGGACAAGAGGACCTGAAGAAGCACTTGAGATAGCCATATATCTCAATGATAAGTATCAAATAGATGGCAGGGATCCAAGTGGTTAT GTTGGCTGCATGTGGTCAATATGTGGAGTTCATGATCAGGGTTGGCGAGAGCGACCTGTATTTGGGAAGATACGATACATGAACTATGCAGGCTGCAAAA GAAAATTCGATGTGGACAATTACATTGCATATGTGAACTTATTAGTTGGTGAGGTGAGGAAGAGAAAAGCTGAAAACTTGCTATCTGGAAAGGAGAAAGT ACTCCGAAGTTAGCATATTTGTGACCCTGAACTGAAGATTGAAGAAAACACAGACAGTATAGGCATATTTTTAGTTTGGGTAAAGTTGCTTAGTAATGTG CCATTTTACGGAATAGTCTCTACTGTTTTGCCACGAGTTTTGAATGCCAAGTTTTTTCATCCAGCAGTAGGAAGTAAGAATTTCTTTTTGGGCAAAATTG GATAAATTATTCCGATAGTTAAACAATAAAGATTTTCGAGCATATGCACATTACACCATTCAATGACTCGGTTGAACCACAAACTATCAAATGTTCAAAG AATTTACACAATTATAATTTTACAAAAAAACATCATATCTGGAGATCATCCAATGTAAGTTCATGCGTCGTTAGCGTCTTTAATTTCTTAATAAATTGTG CAGGATCATCAAGACTCGAGGAGCCCAGAATAATTTCCCTCTTCAGCTTACCAGTAAGCTTGTGGCAAACCCTAAGCTCTGATCTGGTCGCTCCACCAAC AATGAACACAACAATTCGTCGCCCCATCTTACTCAAATCACT
• Tissue: flowers
• Gene name: LI_gene_65939;
• Additional information: details;

Expression of Ll_transcript_100508

FPKM

• FPAB: 11.8
• FPNAB: 9.2
• LF1: 8
• LF2: 8.2
• LF3: 9.1
• LF4: 8.4
• UF1: 7.5
• UF2: 7.2
• UF3: 7.5
• UF4: 7

Labels

• FPAB: abscising flower pedicels
• FPNAB   : non-abscising flower pedicels
• LF1: lower flowers stage 1
• LF2: lower flowers stage 2
• LF3: lower flowers stage 3
• LF4: lower flowers stage 4
• UF1: upper flowers stage 1
• UF2: upper flowers stage 2
• UF3: upper flowers stage 3
• UF4: upper flowers stage 4

Annotations of Ll_transcript_100508

• Blastp: Deoxyribodipyrimidine photo-lyase from Arabidopsis with 75.16% of identity
• Blastx: Deoxyribodipyrimidine photo-lyase from Arabidopsis with 75.16% of identity
• Eggnog: deoxyribo-dipyrimidine photolyase(COG0415)
• Kegg: Link to kegg annotations (AT1G12370)
• CantataDB: -
• Mirbase: -
• Ncbi protein: Link to NCBI protein (XP_019421922.1)
• Pfam: DNA photolyase (PF00875.17)
• Rfam: -
• GO: Links to GO: General; Genes and gene products; Annotations; Ontology;