Ll_transcript_53798

Id TrinityFTRINITY_DN57254_c0_g1_i9
Name TranscriptLl_transcript_53798
SequenceATTTGCATTAGACATGTCATTGCTAATTGATAGCATTATTATCTTTTACTTGAATAATTTAGATTAATGAAAGTAGTAATTGGTTCTTATAATAAAAATC CTAAGTACTCGAATAAAAGAACTATTAAATTGATTATAAAAACTCTTGAAGAGAAGATGATTTTTTTTGGTACATTGGAAAGAAAAAAATAAACTAAGCT AACAACGAAATATCTAACTGCAACAATAGTTGGCAATCTGTTGGGATTGAGTCCTAAATTTTCATCACATCTAGTGAGTGAGAACCTAATTTTGCCATGA AATCTGCTATCATATTAGCCCCTCTATTGACAAAGCAAACCTTAACGACCCAAGAAAGAGCCAACCAAGATCTGATCTTGTTGATCAAAGATAGAATGCT AGCAATTCGAATAGGAATCTCCTCAGAAATAATATGCACAGCTTCCAAGCAGTCGCTTTCCAAGACCACATTCCTGAAACCTAGACGCCAAGCCAGCGAC AACCCATTTTCGATAGCCAAAAGTTCTGCTAGAATAGAGGTCCCCTCACCATAGTTAGCAAAGAAACCCGATATCCATTGACCTTTAGAATCCCAAAGAA CGCCGCCCCCTCCCATTATGCAAGAGCTTCTGATGCAACTACCATCTACACTCAATTTGACCTGGCCCAACTCCGGGTAGCTCCAATGAGTCATGGGGTA CCTTTCCTCTAAAGACCGAGAACCGCCATAGTTGTGCCACTCCCAAAAATCCTGGTGAGTAAAGCGAACCACCAAATTGATATCCCACTGAGTATCCCCC ATAATAGTGTTATTCCTCCATCTCCAAGTCCACCAAATACCTGTCAAGAAGAGAAGACCATTTTTGCCATTATAATTCCCCCACAACCAGCCCTTAAAAG ACTGGGGTATCCAGAATCTAGGCGACGTGAAACCCAAGCGAACCCACAAAGATGATGAATCCTGACAATCCTTAAAGATGTGCAAGAGATCCTCGACACC CACCTGACACCTAACACAATTTGGGCTTGTAGCCAAGTGCCTTCTAAAGCGAAGAGCATTTGACGGAAGAGTGTCATGAAGACCAAGCCAACACATAAGT TTAACCTTCTCAAGAATCCTCAGCCTCCAAACCATTTTCCAGATGTCATCCATAGATGCCACATTTCCTTCCACATCCATAAGCCAGTCATAGGCCGACC TAGCAGTGTAAGAACCTGTAACATGCCCATCCCAAATCCACCCATTAGATTCAGTAAGAGAACCAGGCGAGTAATTTCCACAAATAAACTCCTTCACTTG CAACGGAAACATAGTATACAGTCTAGAAAAGTCCCAATTATCTGCTACCCATAGGTCCTTCACCTGAAGGTGAGTATCAGATATATGGACAAAATCCACA TAAGAACAAAGCATCCCCAAACCTGACCAATTTTCATACCATAAGGATTGATCCTCACTTCCCAAATGCAAGTTATAACCCAGTTTGAGCTTATCAAATG CTCTCACAATGCTTCTCCAGATATAAGACGTTGAAGCTTTTGGGGAGCAACAAATAAAGGATTGTACACCAGAGCTTATTGTTGCTACTGATCAAACTCC AACATAATTTTCCAAGAAGGGAAATGTTCGAAATTCTGGCATCCCTTATGCCCAATCCATTATCACGTCTACGCCTTGTGAGAACCTCCCAACTGACAAG ATGGAGGCCCCGACTATTAACATCACCACTCCAAATAAAATTTCTCGTCATCCTATTTATGTTATTGCATACAGTGTTAGGAAACCACAAGACCTGCATA TAATAAACCGGAATAGAGGAGATGACAGACTTCGCAAGGCATAAACGACTCGCTCTATTCAAGAGATTTGCTTTCCAAGAAGCCAAACGACACTGAATCT TCTCCAGAATAGGGTTAAAAATTGCCCTACCAACTCTTCCCTGAAGTAATGGTCCCCAAATAATTTCCAAGATTACCAACCACCCTCATGGAACAAAGCC TCATAAACCGGTTCTTCCCCCTGTTGGTCACAGATCTGGAGCAGATAAATTTTGATTTGTCTACACTCACTTTCAAACCCGATGCTTTACAGAAATCATT AAGAGTAGAGGAAACAACCCTAACCTGGGAGTTAGTTGCCTTGCAAAACAGTAAGACATCATCAGCAAAAAGGAGGTGAGAGATACTAGGGCCACCCCGA GAGAGTTTAATAGGATGCCATATGCCACTATCCACCTTCTGAGAGATAAGAAGAGTGAGCTTCTCCATGCACAAGACAAATAGATAAGGTGACATAGGAT CCCCTTGGTGAAGATCCCTACTAGGAGTAAATGCCTCCAGCCTAGAACCATTCCAAAGAAGAGACACCTTTCCAATGGTTTGTTCATGTTGATCTTGAAA ATGTTAGCTAGAAAATAGAAATAAGTTTACTTGGCAGAGCCTTGTGCCTTCTTAGATTCAATATGTTGCAAATTTCTAAAGTCACACACATTACATTCTT CTATTTACCTACATCTCCTATAAAGTATTGCAAATTCTTATTGTCTTTTCTTTTTATCAACTTTCCTCCTATCATGCCTATGATATTGAAATTTCTAGCT TACTTGTCAGATCAACAACTTTGTGCAGTGACTACAATTTTGGGAATTATCATAGCTGTCAATGAACATATAATTGATACAGCTCCTACCCAAAATAATA CAGGCTCTACTGAGAAATATTTGTTTCCTTATCCATTATGCTTATCTGCATTGAAGGATTTGGAAATGTTAGTTGAAGTTGTGTCACAACATTACTATGG CGATGATAAGAAATGGAATTTCCTTGCTATTACTGAAGGAACCAAGTAAAGATCATAATCTAATTTAGCATATGTCCCTTCCTTTGTTATCGATCCAAAT TTATCATTATCTTCCGTCGCTCTAACTCAGGGTTCTGGTTCGACTATCATTGTTTTGGAAGAGTGGATATAAGATGCTGCTTCATGGAGGGGAGACATAT AATGATGAGACACATTCAGATAGTTTCGCTTCACAACACCAAACAATCTTAAAGCCTGATGGACACCGTGGTTCTGATTATATGAGAAACAATCATGGTC CAAACCCATGGAATCTGGAAGGAAGAGCACTATCTGCTTTAAGTAGTTTCGGAGAAAAAGCCAGAACGGGGTCAGATCCAATGTGGTTACGTAGGGTTCA TCATCAACAAGCAACTCTGGAGCATACTGGTAATCGGTTTTGAAGATTTTTTAGCTGTAGACAGTAAACTAATTGATTATAATGCTTGTGGAAGTCAACT AGTTCTTGTTGCCCGCTGCATTTTTGCAGTCTCAAGGGTAGAGAGACCAACACTTTCTAGCATATTGTCCAAAAGAGGTCTTCACGGGGTTCTGTTTCTG ATTGGCGAAGTTCTATTTATTAGTAGACCACTTATTAATGTTCTATTTATTCGAAAATATGGTGTCCGGACATGGACCCCTTGGTCCCTTTCACTGGCTA TTGACTGCATATCAAACAGTATTCTTTCACTTGTTATGACATCTGTAGATGGTGGGGATGAGCAGAAGTTTCATCTTTCTGCTCCAGAAAAGGATGAGGT TAAACGATGGAAGCTGTTATTTTTGTACTTTACCTAATGAGAGATCCATTTCTCAGCAAGTATACTAGGCAAAGACTCGAAAGCACGGAGACAATTTTGG AACCTTTACCTATCATAGGATTTCTTGCAGCAAAAATCGTTGAGCTTATAATTGGAGCGCAAACTCGATACACTTACATGTCGGGATCATGATATAAAAT CTAGAAGAAACACTTCACTGCCTTCCCAGATTGTGGGAAAGCATCTTACTGTGCTCTCACATTATCTCCTGTTCCAAAATTTTCAAATGATGAGGGGATA TGAAGTATGCTACTACTTTGATTGAAAAGTAAGAAAAATGGCAAGCTTGAACATTTGTTTTGCACAATGATGGAAGGTTATGGCTGTCTGCGAATTCAAC ACCGAACGTGAAACTTTTATTTCATTCGGTTCCTTTACGGACTTAATTCAGAGATGTTGGACAAGTTGATTGCAAGGATGGCTCTACTATCAACATTTGT TTTGAAATTTTTTGCTTTAATTTTAATAATAAAAAAGAGAAATAACAAAAGATACTGATTTGTCAAAAATATTATTAGATGCCAGTGCAAAGATATTATC ACACTTGCATACCAATTAAACATTTCATTGTTTTATTCTACTCCCAAACAAAGAGGGTTGGTGAGTCTACCTCAAACACTTGTAGTTATGAGCGTCAGTC AATTGGAAAGTTTATCATGTGATTCTTCAGCTCAGCAAGCTGTATTCTGATCGGAGTTTCAAGACAAACCGGTTTTTGCCTTGGCCGGCTGGTTATCCGG TGTGGCATGCCTTTTAATAGTCTAATCCGGTTCAACCTTGAATTGGACAAAGACACCTGGTTAGGACAGGCACAATTTTCACTTCAAGGTTGGACCGGAC GAGTCGGACTGCTGGTACGGTTGTACAACAAAGCAAACCATTATTCTACACCTTTGTAGGTATTACAGTTGTTCTGTAGTGATGTAGCCATTTATTATTT TCGCGTGTCATTGTCCTTTTGATGGTTGAACTAAATGTCTCTGTTTGTTAAGGTACTATGAAATTATTCACAAGCATATTCGTCTTATATATCTGGG BLAST
Tissueflowers
Gene nameLI_gene_67147; 
Additional informationdetails; 

Expression of Ll_transcript_53798

Labels

FPAB abscising flower pedicels
FPNAB    non-abscising flower pedicels
LF1 lower flowers stage 1
LF2 lower flowers stage 2
LF3 lower flowers stage 3
LF4 lower flowers stage 4
UF1 upper flowers stage 1
UF2 upper flowers stage 2
UF3 upper flowers stage 3
UF4 upper flowers stage 4

Annotations of Ll_transcript_53798

BlastpPutative ribonuclease H protein At1g65750 from Arabidopsis with 28.79% of identity
BlastxPeroxisome biogenesis protein 16 from Arabidopsis with 48% of identity
Eggnog-
Kegg-
CantataDB-
Mirbase-
Ncbi proteinLink to NCBI protein (XP_019431061.1)
Pfamzinc-binding in reverse transcriptase (PF13966.5)
Rfam-
GOLinks to GO: General; Genes and gene products; Annotations; Ontology;