Ll_transcript_166960

• Id Trinity: FTRINITY_DN57322_c0_g3_i1
• Name Transcript: Ll_transcript_166960
• Sequence: CTAAAATTGATGATTAGGATGAGGAGTAAGTATAAAAGACTTACTCTTGGAGTAACTTGATCCCTCCCCATAAAAAAATAGGGTGGTTTTTAAAGTTAGT TGTTTGTACTCCTGAACTTTAGTAGCATCAGTTCTTGCTTGTAGGGTTTTTAAAGTTACTTTCATTGGGAGGACTGGTCAGCCCTGTCTCCCCTCAGTCA ATTTGTTGCTGTTGCTAGTAGGGTAGCTGCTGTGACCAGTGACACAGATGGCATGCCAAATTGACTGTTAACAGTGTGTGGTGTGTTGGGAAAGGATGTT GTGTGTGGCCATAACTATTGGTTGTTGCTTGCTTCTGAGTTCACTTTATAGTTCAACAGATTACTCTTTCTAAATGTGTGAGACTATCCTTGCAGTCTAA TAAAAAAACAAGGAACAGGGCTTATGATATTCTCGTCCAAATTGGCCATGCATTTGGTGATGAGGAGAGAGGTGGAAACAAAGAAAACCTGTATCATTTT TTTAACATGGTTGCAGGAGGCTTGGCTGGGGATACTCCACATATGATAAGTTCAGCAGCCAAAGGTTTAGCTCGCTTGACATATGAATTCTCTGACCTTG TTTTAACTGCTCTTGATTGGCTACCATCCACATTTCTTCTCCTCCAGAGAAAAAATAAAGAGATAATTAAGGCTAATCTTGCTTTATTGAAGGTATTAGT AGCCAAATCACAAGCCGAAGTTTTGCAGGTGCACCTGAGGAACATGGTGGAAGGTTTGTTAAACTGGCAAGATAACACCAAAAATCATTTCAAAGCAAAG GTGAAAAATATTTTGGAAATGCTAGTTGCGAAGTGTGGTCTGGAGGCTGTTAAAGCAGTCATGCCTGAAGATCATATGAAGCTTCTTTCCAACATACGCA AGATCAAGGAGCGAAAAGAGCGGAATCGTAGTGTTAAATCTGAGGAAGCTAGATCTCATTTTTCAAAAGCAACTACATCCAGGCAAAGTACGTGGAATCA TACAAAACTTTTTTCGGACTTCGATGAAGATAGTGACGGTAGTGATTCAGGGTACCTGAATGGCAAGACAGTTTCTAGAAGGGGCAAGTCTTCACATCTC AAATCAGCAGCGTCTTCATTTGGGCAAAAAAATATCAGACTAAAGAAGAATTTGCATGAGCACCTCTCTGACCAATCAGATGACGAGCCACTTGATTTAC TAGATAAGCAGAAAACAAGGTCAGCTCTTAGATCATCAGATTATCTTAAAAGAAAGTCAAGGCCAGATGATGAGTTCGAAATAGATTCAGAAGGACGCAT GGTTATTAATGAGGAAGGGGAAAGAAAGATGGAAAAGCCTTCGGACCCTGATTTTGATATTAAGAGTGAGCGTGATAGTCACATCTCTGCAAAGTCAGGA ACCAAAACCCAAAAGCGGAGAAGAACATCGGAGTCTGGGTGGGCTTACACAGGGAAAGAATATTCTAGCAAAAAAGCAGGTGGAGATGTGAAGAGGAAGG ACAAGCTTGAACCCTACGCATATTGGCCACTTGATCGGAAAATGATGAGTCGTCGACCTCAGCTTCGAGCTTCGGCTAGGAAAGGCATGGCAAGTGTTGT AAGGATGACAAAGAAGCTTGAAGGCAAGAGTGCATCTGGTGCACTGTCTATAAAGGGTTTGAAACCAAGGACTCAAAGGAAAGGTAGCAATAAAAATTAA ATGAGTAATTTGATTGTTACATCATGTTTTGTAGCGTATACTATATAGTTTATGATGAGGTGTTGTTATACCAATTTTGAAGCTTCCTTTAATGTTCTGG TACAATAATGTATGTTATTTATGACATTTTTTATTCGTGTTGTTTTACAATTTGTTTTACAAAATATTCAAGTTCTATTATAGTGCTTGATTTGTTTATG ATTCCAATTGAAGCAATTAACACTTCGAATAAAA
• Tissue: flowers
• Gene name: LI_gene_67741;
• Additional information: details;

Expression of Ll_transcript_166960

FPKM

• FPAB: 2.2
• FPNAB: 5.2
• LF1: 2.5
• LF2: 1.6
• LF3: 5
• LF4: 7.2
• UF1: 3.9
• UF2: 2.4
• UF3: 4.3
• UF4: 9.1

Labels

• FPAB: abscising flower pedicels
• FPNAB   : non-abscising flower pedicels
• LF1: lower flowers stage 1
• LF2: lower flowers stage 2
• LF3: lower flowers stage 3
• LF4: lower flowers stage 4
• UF1: upper flowers stage 1
• UF2: upper flowers stage 2
• UF3: upper flowers stage 3
• UF4: upper flowers stage 4

Annotations of Ll_transcript_166960

• Blastp: Ribosomal RNA-processing protein 12 from Saccharomyces with 30.19% of identity
• Blastx: Ribosomal RNA-processing protein 12 from Saccharomyces with 28.5% of identity
• Eggnog: -
• Kegg: Link to kegg annotations (YPL012W)
• CantataDB: -
• Mirbase: -
• Ncbi protein: Link to NCBI protein (XP_019455321.1)
• Pfam: NUC173 domain (PF08161.11)
• Rfam: -
• GO: Links to GO: General; Genes and gene products; Annotations; Ontology;