Ll_transcript_166962

• Id Trinity: FTRINITY_DN57322_c0_g3_i3
• Name Transcript: Ll_transcript_166962
• Sequence: GAAAAAACCTATGAAGTTATGTTACATAAATAGAACCCTAGCATAATATACCTTAAGTAATCAAATATGCATGTCCAATGTCACATAAGTGTATATTTTT ATTTTCCCTATATAGGTAGTTCCCCAAAAAACAGGCCCAAAAAGAATTATAAGATTTTTGATAGCCCAAAGCCATATATAAACAATTTATTGTCATCTTT TGTTGTAGTGTTTGCATAAAACTTAGTTCCCATAGAAGCTGCTAGGGTTTTACTCAACCTTCATTCCAATGGAAGGCATTGAAATTGAAGAACCCTTATT TTCCATTCCCGAATCAAACGACGATTTCTGCAATTCAATCCTCTCTCGTTTCTCCAATTCCACCGATGAAAATCACCAACACCTCTGCGCCATTATTGGC GCCATGTCTCAGGAGCTTAAGGACATGAACCTTCCTTCTACTCCAGTTGCTTACTTCAGTGCCACATGTTCCTCGCTTGATCGCATTGCATCCGAACCAA ACCCTTCCAAAAACGTCATCGTTTCACTTCTCACTATCTTATCACTTGTTATCGCTAGAGTACCGCTTCCGGTGCTGAAGAAGCAGAGAGAGTTTTTGTC GGGTTTATTGGTGAGACTTCTTAGTCCTGAGTTGGATTCAGAGAGTGGTGTTATATCTGGATTGAAGTGCCTCTCGTATTTGTTGATCAATAGGGATAGT GTCAGTTGGTCTGATGTGTCTCCTTTGTTCAATGTCTTGTTGACATTCCTTACTGATTCGCGACCGAAGGTCAGAAGGCAATCTCATTTGTGTCTTCGTG ATGTCTTATTAAACCTTCAAAAATCATCATTACTGGTGTCTGCAAGTGAAGGAGTGACAAGCCAACTAGAAAGGCTTCTTCTGCTTGTTGGTGGAACAAA CGCTAGTGCTGGTGAAGGAAATAAGGGAGCCCAACAAATTCTGTTTATTCTTGATGCTTTGAAAGAATGTATTCCTTTATTGTCACTGAAATACAAAACT AATATTCTTAAGTACTTCAAGACGCTCTTAGATTTGCGTCAACCCTTAGTTACAAGGCGCATAACAGATGGCTTGAGTTTCCTTTGTCATTACCCAGCAT CTGAAGTTTCCCCTGAAGCACTACTTGAGCTGTTAAGCTCATTGGCTCTTTCTATATCATCAAATGAGACATCTGGAGATGGAATGACTGTTACTGCTCG CTTGCTTGATTCTGGAATGAATAAAGTTTATTCTCTTAACAGGCAAATATGCGTAATTAAGCTCCCCATTGTGTTTATTGCTCTGAAGGATATTTTGGCA TCTGAACATGAAGAGGCCATATACGCAGCCACTGATGCCCTCAAGAGCTTGATAAATTCTTGTATTGATGAAAGTCTGATTAAACAGGGAGTGGATCAGA TATCTTTGACAGATAATAAAGATGCACGGAGGTCAGCGCCAACCATTATTGAAAAAATTACTGTAACTATTGAGAGTTTGCTTGATTACCACTTCGCTGC TGTCTGGGACAGAGTATTTCAAGTTGTTTCAGCCATGTTTTATAAATTAGGAACATATTCTCCTTATTTTATGAGAGGGATACTAAAAAACTTGGAAGAA GTGCAAAAGCTGCCTGATGAAGATTTTCCCTTCAGGAAACAGCTGCATGAATGCCTTGGATCAGCTCTTGTTGCAGTGGGTCCTGAAATTTTGTTGTCCT TTATACCTCTGAATTTGGAAGTTGAAGACTTAGCTGATGCTAATATATGGCTTTTTCCAATTTTAAAACAATACATTGTTGGTGCACGTTTAAACTATTT CACAAAAGAAATTTTGCCCATGATTGAACGGGTTAGGGGGAAGGCTCGAAAGTTTGAGAATCGAGGATTGATGGTCTCGTCAAGGAACGCTGATGCACTT GCATACTCATTGTGGTCTTTGCTGCCTTCATTTTGCAACTATCCTTTAGACACTGCTGAAAGTTTCATGGTTTTGAAGGAACATTTATGCCATAAGTTAA AAGAAGAATCTGACATTCGTGGAATAATATGCAGTAGTTTGCAGCTTCTGATTCAACAAAACAAGGATATTGTGGATGCAAATGGCAAGTATTCGATTGA GAAAGATATGACCAAGGAGCAAAATTTGGCGCGTTATTCACAACAGGTTGCAACAAACAATTTGAATGTGCTGAAATCATCTTCTAAGAGCTTGCTAGAT GCTTTATCAGAAGTATTTCTGAAATCTAGAAAAGATGACGGTGGCTGTTTGCAGCGCACAATAGGTGATATTGCTTCCATAGCAGATAAGGCGATGGTAT CCAATTTATTCATATACAGAATGAAGGAGCTTCGTAAACGCACACAAGAGGCCAGCAATATTGACATTTCCACAAGTTTTAGTTCTATGCAGATTGATGA GCCATTAAAAAATATGCCTCTATCAGTTGTCAGGGCACTGTATCTTGATTTTGCAGTTTCGCTGTTGCCTGGTTTAAATGCTAAAGAGATAAATACATTA TTCCTTGCAATAAAGCCAGCACTGCAGGATGTTGAAAGTATCATGCAGAAAAAAGCATACAAAGGACTTTCAATCATTTTCAAGAGCTCAGATAGTTTTG TTTCGTCGAACATTGAGGAACTGCTTGGGCTTATGGTTGAAATTCTCCCTTCGTGCCATTTTTCTGCTAAACACCACAGGCTTGATTGCCTTTACTTCTT AATTGTCCATGTCTCAAATTCAAAGGATAATATGGAGGACAGGTGGCGAGAAATTGTTGGCTCTTTCCTTACTGAAATAGTACTTGCTCTAAAAGAGTCT AATAAAAAAACAAGGAACAGGGCTTATGATATTCTCGTCCAAATTGGCCATGCATTTGGTGATGAGGAGAGAGGTGGAAACAAAGAAAACCTGTATCATT TTTTTAACATGGTTGCAGGAGGCTTGGCTGGGGATACTCCACATATGATAAGTTCAGCAGCCAAAGGTTTAGCTCGCTTGACATATGAATTCTCTGACCT TGTTTTAACTGCTCTTGATTGGCTACCATCCACATTTCTTCTCCTCCAGAGAAAAAATAAAGAGATAATTAAGGCTAATCTTGCTTTATTGAAGGTATTA GTAGCCAAATCACAAGCCGAAGTTTTGCAGGTGCACCTGAGGAACATGGTGGAAGGTTTGTTAAACTGGCAAGATAACACCAAAAATCATTTCAAAGCAA AGGTGAAAAATATTTTGGAAATGCTAGTTGCGAAGTGTGGTCTGGAGGCTGTTAAAGCAGTCATGCCTGAAGATCATATGAAGCTTCTTTCCAACATACG CAAGGTAACAGCATTCCACTGTAATTTTTTACAGAGTCATCTTTCTGGATTTTGAGTATTATCTTTACACAGATCAAGGAGCGAAAAGAGCGGAATCGTA GTGTTAAATCTGAGGAAGCTAGATCTCATTTTTCAAAAGCAACTACATCCAGGTAATAATTATGCATTTACATCCGGTGGTAAGTTAAGAAAGTGACACA ATAAAGGTGTTCTCAGTTCGGCCCACCAGTAATCTTGATACGACATGTTTGTTCCATAAATTCTAAGTAGTGTGATTAATCTGATTATGATTTTAATATT ATTCATCATCATAGACTTGACCATTTTATTGTATACTCACTATACTGTGTGATTTTGTAATTGCAAGTGATCTCTGATACCTGCTTCATTTAATTCATTT TCAGGCAAAGTACGTGGAATCATACAAAACTTTTTTCGGACTTCGATGAAGATAGTGACGGTAGTGATTCAGGGTACCTGAATGGCAAGACAGTTTCTAG AAGGGGCAAGTCTTCACATCTCAAATCAGCAGCGTCTTCATTTGGGCAAAAAAATATCAGACTAAAGAAGAATTTGCATGAGCACCTCTCTGACCAATCA GATGACGAGCCACTTGATTTACTAGATAAGCAGAAAACAAGGTCAGCTCTTAGATCATCAGATTATCTTAAAAGAAAGTCAAGGCCAGATGATGAGTTCG AAATAGATTCAGAAGGACGCATGGTTATTAATGAGGAAGGGGAAAGAAAGATGGAAAAGCCTTCGGACCCTGATTTTGATATTAAGAGTGAGCGTGATAG TCACATCTCTGCAAAGTCAGGAACCAAAACCCAAAAGCGGAGAAGAACATCGGAGTCTGGGTGGGCTTACACAGGGAAAGAATATTCTAGCAAAAAAGCA GGTGGAGATGTGAAGAGGAAGGACAAGCTTGAACCCTACGCATATTGGCCACTTGATCGGAAAATGATGAGTCGTCGACCTCAGCTTCGAGCTTCGGCTA GGAAAGGCATGGCAAGTGTTGTAAGGATGACAAAGAAGCTTGAAGGCAAGAGTGCATCTGGTGCACTGTCTATAAAGGGTTTGAAACCAAGGACTCAAAG GAAAGGTAGCAATAAAAATTAAATGAGTAATTTGATTGTTACATCATGTTTTGTAGCGTATACTATATAGTTTATGATGAGGTGTTGTTATACCAATTTT GAAGCTTCCTTTAATGTTCTGGTACAATAATGTATGTTATTTATGACATTTTTTATTCGTGTTGTTTTACAATTTGTTTTACAAAATATTCAAGTTCTAT TATAGTGCTTGATTTGTTTATGATTCCAATTGAAGCAATTAACACTTCGAATAAAA
• Tissue: flowers
• Gene name: LI_gene_67741;
• Additional information: details;

Expression of Ll_transcript_166962

FPKM

• FPAB: 0.3
• FPNAB: 0.5
• LF1: 0.1
• LF2: 0.3
• LF3: 0.2
• LF4: 0.4
• UF1: 0.2
• UF2: 0.3
• UF3: 0.1
• UF4: 0.3

Labels

• FPAB: abscising flower pedicels
• FPNAB   : non-abscising flower pedicels
• LF1: lower flowers stage 1
• LF2: lower flowers stage 2
• LF3: lower flowers stage 3
• LF4: lower flowers stage 4
• UF1: upper flowers stage 1
• UF2: upper flowers stage 2
• UF3: upper flowers stage 3
• UF4: upper flowers stage 4

Annotations of Ll_transcript_166962

• Blastp: RRP12-like protein from Gallus with 26.51% of identity
• Blastx: RRP12-like protein from Gallus with 26.05% of identity
• Eggnog: ribosomal RNA processing 12 homolog (S. cerevisiae)(ENOG410XQ3D)
• Kegg: Link to kegg annotations (423845)
• CantataDB: -
• Mirbase: -
• Ncbi protein: Link to NCBI protein (XP_019455321.1)
• Pfam: NUC173 domain (PF08161.11)
• Rfam: -
• GO: Links to GO: General; Genes and gene products; Annotations; Ontology;