| Id Trinity | FTRINITY_DN57341_c1_g1_i3 |
|---|---|
| Name Transcript | Ll_transcript_168254 |
| Sequence | AATATAGTCACTCTTCCTTATCTTGCAGTCAACGAGTCTCTGTCTGTGATACAAACAGTAAAATGCAGAAAGAAGAAAGCAAGAAATGTTGGATTTAGTT GAAAATGGGTTTAAGCAGCACCACTGCTAAACTTTCAGAACTCCCTCTCAGGACATCACTCTCACCATTCACTACTCTCAACTCTATCTTCTTCTCTTCT TCTTCTTCTTCTTCTTCTCACTTTTCTCATACCAATTTCAACAAATTCCCACTTCAATTTCTCAACTCTTTTTCTTCTTCTTCAACCATTCATCGAAACT ATTCATCAAACACCTTATCTTCACCTTGGCTCACTAAATGGCCATCCAATCCCAACCCACCACCCTACCGGAAAACGCTTCCCGATTCCAACCCCCACGA CGGCGACGACGGCCTCTTCGACCCAATCGTTGACACTCGCTATTCCCGCAACAATGATAACGATAAACCCAGCAACGCAATCGACAGAGTCGTTCTTAGC CTTCGCAATCTAGGGTTACAAGACGAAGAACAACAAGAACATGGAGTGAATGAAGTAAGTGGCGATTTTTTAGGACGAGAATGGATTCGGCCTGATACTA GTTTTCGTGAGGATAGTGATGACATGGTTTTGCCATGGGAGAAAGAGGAAGTGGAAGAGGAAAAAGGGGAAATAGAGGGAGAGAAAAATGGGTTGAGGAA GAGAAGGGTAAAGGCGAAAACTTTGGCGGAGATGACTCTTGATGAAGAGGAAATGAGGCGATTGCGAAGAATTGGAATGCAGCTTAGAGATAAAGTTAAT GTGCCAAAGGCTGGTCTCACTCATGTTGTGTTGGATAAGATTCATGATGGTTGGAGAAAGAGTGAGATGGTGAGACTCAAGTTTCATGAGGTTCTTGCAA AGGATATGAAGGCTGCTCATCAAATTGTTGAGCTTCGAACAAGAGGATTAGTTATATGGAGGGCAGGAAGTCTTATGCTGGTGTACCGTGGTAGAAATTA TGAATGGCCAACATCCGGAAGCCAACTGAATAAGAGTTTGTTAAGAACAGAAGGCGATAATGCAACCTCATCTCTGGAAGAGAATGAGCCAGTTATGAGG AATCAAGGACAGCCTGAGATGACACCGGAGGAAGCAGATTTCAACAGACTGCTTGATGATTTAGGTCCTCGGTTTGTTGAATGGTGGGGTACAGGAATAC TTCCCGTTGATGCTGATTTACTTCCTCCTACAGTTCCTGGTTACAAAACACCTCTTAGGCTTCTTCCTGCTGGAATGCGTCCACGACTGACTGATGCGCA GCTGACAAATATGCGAAAAATTTCCAAACCTCTTCCTTGTCATTTTGCCTTAGGGAGAAATAGAAATCATCAAGGTCTGGCCTCTGCTATTCTTAAGCTT TGGGAGACAAGCTTAGTTGCAAAGATTGCTATTAAGCGTGGTATCCAGAATACAAACAGCGAACTAATGGCTGAGGAACTGAAGAAGCTTACAGGAGGTA CCTTGCTGATAAGGAATAAATATTACATTGTAATATATCGCGGGAACGACTTTGTTCCAACCTGTGTAGCTGCTGTTTTAACTGAAAGACAGGAATTGAC AAAACAGGTGCAGGAGGTTGAGGACATGGTGCGGTCTGGAGCTGTTGATGTAACACCATCAGAGGAAGGTGAAACAACAGCACAAGCAGGAACATTAACT GAGTTCTATGAGGCTCAGGTACGCTGGGGAAGGGATGTATCTAGCGAAGAACATGAGAAGATGATGAAAGAGGCAGCCAAAGTCAAGAATGTTAAGCTTT TCAAAAAGATTGAACACAAACTAGCTCGTGCTCAGGTCAAAAGGCTTAGAGCAGAAGAGCTGTTACGTAAAGTTGAAGCATCTCTGGTTCCAGCTGGTCC TGATTATGACCAGGAAACAATCACAGATGAAGAACGTGTTATGTTCCGCAGGGTTGGTTTGAGTATGAAGGCATACTTGGAACTTGGTACACGTGGTGTT TTTGATGGTGTCATTGAGAATATGCATTTGCATTGGAGGCACCGAGAACTTGTTAAATTAATAACAAAACAAAAGACCCTCACTTTTGTTGAAGACACGG CTAGGTTACTGGGATATGAGAGTGGTGGAATATTAGTCTCAATAGATAGAGTTCCCAAAGGATTTACTCTTATTTACTACCGTGGAAAGAATTATAGGCG ACCCATTACTCTGAGGCCTAGAAACCTTCTAACAAAGGCAAAAGCATTGAAGCGTGCAATAGTCATGCAACGCCACGAGGCTCTGAGTCAGCATATATCT GAATTGGGGGAAAAAATAGAAGAAATGAGAAAAGGACTTGCTTCGTCACAAGATTTGAAACCTGAAGATGGGTGCAGCATAGAAGACCGTAATCAAATAC ACCACATATCAGAATTTGCCCAAAGTGAGGATGAAGGTAGTGATTATGATGATAGTGATGCTGGGTTTGATTATGAAGATGACAGTAGTTGGGATGATGA GGATTCTGAGTGTCCAAACTTAGAAAATGATGGGTATCCTTTGAAGGCAGGTTGACACATTCTTTCAAGTTTCTTAAGTTCCTGGAAGAACTCTGCCATT GCCCGCAGCAAGCTGGGTATAAATTCTTTATTGTTTATTTTTATAGGCAATGGTTATTTTTGTTAAAGGGGAGAGGGAGTGCAGTCGTTGGCGTTTGAAC CCAGATACTCACTCCATATCCCGCAACTGAGCTGCCTTGTTCACTTTCATTTGTATGTTCGTAATAATGATTTTCATATACTACGTTTAAAAAAAAGATT AATTGCCACAGTGCTGTTGCCAACTTGCTATAGTTTAGTTCTGACTATTGTGCAGTTTAATAAAATAGTTTGCACAACAATATTTTGCCATATTGATTGT TTGTTCAACAGGTTTTGGGATCAATTTGGTTATTTTGTCAGTATTTCCCCCGGACATTGAGTCATGCTTCCAGTTGTTTGATGGTTCTTCCTCTGCACAT TCTTGTAGCTGAAAGTTCGGAATTCGATTTACTCAGTTCTGGAGAGATGTGTTCACAAAATCAATCACCAATTCATTACCAGCTGACTGCCTTGAGATTT TATCTTCTAGGTCTAACTAACTTTTGAGCAGTATGGACAAGCAATATGCTTTCTTTGTATGTTATTCTGATAATATTTATTTAAAAAAGATCAGAAATTA GTAGATGAGAGGGGGCAATAGCACAAAAGAAGAGGATAAGACATCCTCGGATAATGTTATTCTGGTAGTTATGGGTTTCCTGGTTTTTGAAGTCTTGTTT CTTCCTTCAATGGCTTCTTGTACCCCATAGTAAATGTAACATGTATAAATGGATGAGAAACAATTTTGGCTACTGTCATATGAGCAAAATAGCATTTGTT CACCTTAATTTTGCAGTTTGCACACTTCTTATCATCTCTGATCTCTTATATAGATTGGGTCATGAATCATCAAAGAAGTCA BLAST |
| Tissue | flowers |
| Gene name | LI_gene_67900; |
| Additional information | details; |
| FPAB | abscising flower pedicels |
| FPNAB | non-abscising flower pedicels |
| LF1 | lower flowers stage 1 |
| LF2 | lower flowers stage 2 |
| LF3 | lower flowers stage 3 |
| LF4 | lower flowers stage 4 |
| UF1 | upper flowers stage 1 |
| UF2 | upper flowers stage 2 |
| UF3 | upper flowers stage 3 |
| UF4 | upper flowers stage 4 |
Annotations of Ll_transcript_168254
| Blastp | CRM-domain containing factor CFM3, chloroplastic/mitochondrial from Zea with 42.99% of identity |
|---|---|
| Blastx | CRM-domain containing factor CFM3, chloroplastic/mitochondrial from Zea with 46.14% of identity |
| Eggnog | poly(a)-specific ribonuclease(ENOG410XS9D) |
| Kegg | Link to kegg annotations (100126360) |
| CantataDB | - |
| Mirbase | - |
| Ncbi protein | Link to NCBI protein (XP_019446257.1) |
| Pfam | CRS1 / YhbY (CRM) domain (PF01985.20) |
| Rfam | - |
| GO | Links to GO: General; Genes and gene products; Annotations; Ontology; Links to GO: General; Genes and gene products; Annotations; Ontology; |