| Id Trinity | FTRINITY_DN57425_c0_g2_i7 |
|---|---|
| Name Transcript | Ll_transcript_183721 |
| Sequence | TATTATTCCGCATTTAAATCTTTATTTCACGAATCAATTTCGGCGCATCAACGGCGCAACATCTAAACGAACTCAACACAGTTACAACCCAGTTGAGTTC AGTTGGAATCAATTTCGATGAAGAAGTATGAGCTTTGATACTTTTGTCTTCCCTACCAAAAAGCTGGAATGCTACTGTCACAGTTGTGAGTAGCTCATCA GGAAGCAACAAGTTAAAATTTGATGATGTTCGTGACTTGGTCCTAAGTGAAGAGATTCGCCGGAAAGAATCGGGTGAATCATCAACCTCTTCAGTATTAC ATACAGAGTCAAGAGGTAGGAGTTCAACCAGGGGAAGCGGACGCGGTAAATCAAAGGTGAGACCGTCCAAGTCTAGAAATCATCATAGTTCTAACAGCTC GAAGACTATCGAGTGTTGGAACTGTGGGAAGACCAGACACTATAAAAATTAATGTAGGACTGCACCGAAGAAACCATAGGTGAAAGATGAGGCTAACGTT GCTTCAACATCAGAAGGGAATGATGTGTTGATATGTTCTTTGGAGAACAAGGAAGAGTCTTGGGTGTTATACTTTGGAGCATCATTTCATGCAACTTCGC AGAAAGAACTCTTTGCGAATTATGTCTCCAGAAATCTCGGTAAAGTTTATCTTGGTAATGAACAGTCTTATGAGATTGTAGGAAAAGGTGTAGTAAAGAT CAAGTTGAACGGGTCTATTTGGGAACTGAAGAATGTCAGACACATTCCTGACCCGACGAAGAACTTAATCTCAGTAAGCCAGTTGGCCAGTAACGGCTAC ACAACAATCTTCCATGGAGATCAGTGGAAAATTTCAAAAGGTGCAATGACGATAGCTCGCGGCAAAAAGAGTGGTACTCTTTATAAAACACCAGGAGCAT GTCATTTGATTGCAGTCGCAACAAATGAAAATCCCAATCTATGGCACCAAAGACTTGGCCATATGAGTGAGAAAGGGATGAAGTTTATGCACTCGAAGGG CAAACTTCCAGGTCTTCAGTCCGTAGAAATTGACATGTGTGAAGACTGTATATTTGGAAAGCAGAAAAGAGTTAGCTTTCAGAAAAGTGGAAGAACCCTA AAGAAGGAGAGACTCGAGCTTGTTCACTCTGATGCTTGGGGTCCAACGACCGTCTCATCCATTAGCGAGAAGCAATACTTTGTGACTTTTATTGACGATC ACTACAAAAAGGTATGGGTATACTTTCTGAAACATAAATCTGAAGTATTTGAAGCTTTCAAGATGTGGAAAGCCATTGTGGAAAATGAGACAGGGTTGAA GGTCAAAAAACTCAGGACTGACAATGGTGGTGAATATGAAGACACCAGATTCAAGAAGTTTTGCTATGAGCATGGTATCAGAATGGAGAGGACTATGTCA GGTACGCCTTAACACAATGGTGTAGCTGAGCGTATGAACCGAACATTGATTAAAAGAGCCAGAAGCATGCATGTGCAGTCAGGCCTACCGAAGCAATTAT GGGCAGAAGTAGTTAACACATCAGCATAATTGATCAACCGAGGTCCATCAGTACCATTGGAGCTTAGCATACTAGAAGAGGCGTGGAGCGAAAAAGAGGT AAAACTCTCACATCTTAGAGTTTTTGGTTGTGCAGCATATGTGCACATTAGTGATCAAGGTAGGAACAAACTTGACCCAAAATCAAAGAAGTGCACTTTC ATTGGCTATGGTGAAGATGAGTTTGGTTA BLAST |
| Tissue | flowers |
| Gene name | LI_gene_68582; |
| Additional information | details; |
| FPAB | abscising flower pedicels |
| FPNAB | non-abscising flower pedicels |
| LF1 | lower flowers stage 1 |
| LF2 | lower flowers stage 2 |
| LF3 | lower flowers stage 3 |
| LF4 | lower flowers stage 4 |
| UF1 | upper flowers stage 1 |
| UF2 | upper flowers stage 2 |
| UF3 | upper flowers stage 3 |
| UF4 | upper flowers stage 4 |
Annotations of Ll_transcript_183721
| Blastp | Retrovirus-related Pol polyprotein from transposon TNT 1-94 from Nicotiana with 46.6% of identity |
|---|---|
| Blastx | Retrovirus-related Pol polyprotein from transposon TNT 1-94 from Nicotiana with 42.07% of identity |
| Eggnog | - |
| Kegg | - |
| CantataDB | - |
| Mirbase | - |
| Ncbi protein | Link to NCBI protein (XP_020963654.1) |
| Pfam | GAG-pre-integrase domain (PF13976.5) |
| Rfam | - |
| GO | Links to GO: General; Genes and gene products; Annotations; Ontology; Links to GO: General; Genes and gene products; Annotations; Ontology; |