| Id Trinity | FTRINITY_DN57438_c1_g1_i14 |
|---|---|
| Name Transcript | Ll_transcript_185598 |
| Sequence | ATTACAGAAGCGCGACCTTCACTGAGTCTGAAGTGGACAAAGGAGTTTCTTTCTCTTTTTTCCTTCAAATTTCAAAACCTAATCTCACACCTTTTTCTCT TCCTCATTTCACTCGCTTAGGTTAGAATCAGATCCCTAATTCCCTACCTCACTTTTTCTCATCCCGAGAGAAAAAGGAATTCCAATGAAACTTTGAATCG CGTGTTGATCTCTTATTGTGATGAATAAAAACTCTGAAACCATAAAGCTGATTATTTTTTGTTTTATTTGATCTGGTGTGTGTTTTCCAATAGAGAAAGA GAAGCTGGTGTATGGTGATGGGTTCGAAGATTGAAGGACAATCTACGCCAGCAAATCGACGTGATCCTTATGAGGTTTTATCTGTAACAAGAGACTCTAC AGATCAAGAAATCAAATCTGCTTACAGAAAGCTAGCTCTCAAGTATCACCCTGACAAGAATGCCAGCAATCCCGAGGCTTCAGAACTATTTAAGGAGGTC GCATATTCTTACAGCATATTGTCTGACCCAGAGAAGAGAAGGCAGTATGATAGTGCAGGATTTCAGGCACTTGATGCTGATAGCATGGACATGGAAATTG ACTTATCTAATCTCGGGACTGTCAACACAGTGTTTGCGGCATTATTCAGCAAGCTGGGTGTCCCTATCAAGACTTCCGTTTCAGCCAATGTACTTGAAGA AGCTCTTAATGGCACTGTTACCGTCAGACCCCTACCCATTGGAACATCAGTTAGTGGAAAGGTAGAGAAGCAATGTGCTCATTTTTTTGGCGTGACAATA AATGAGCAGCAAGCTCAGTCAGGGATTGTAATAAGAGCTACTTCAACTGCACAAAGCAAATTCAAGTTGCTCTACTTTGAACAAGATGCAAATGGTGGTT ATGGTTTGGCGTTACAGGAAGATAGCGAGAAAACTGGCAAGGTGACATCTGCAGGAATGTATTTCTTACATTTTCAAGTGTACAGAATGGATTCAACTGT GAATACGTTAGCAATGGCCAAGGATCCTGAAGGGTCTTTCTTTAAAAGGTTGGAAGGTCTTCAACCTTGTGAAGTCTCCGAACTGAAGCCTGGCACTCAT ATCTTTGCTGTTTATGGGGATAACTTCTTTAAGACTGCTAGTTATACAATTGAGGCAGTATGTGCAAAATCACATGAAGATACCAACAAAAAGCTTATGG ACATTGAGGCTCAAATATTAAGAAAGAGGAATGAGCTACGCCAATTTGAAGCAGAATATAGAAAGGCATTGGCACGTTATCAAGAAGTGACAGACAGATA CACAAAAGAAAAACAGTCTGTACGTTCTTTCAACTTGTGCTACAGGACAAGTGCATATCTGGAAATCCACACATTTGCATTATTTTTAGTACTAATTCTG CCCAGTTTAGTTAAAAATTAGTTGAGAAAATAACATATGTTCCACTTGAGTTGTGAGGCTAGATCAGTTGGGACAATCATATCACTACTTGCTTGGTCGG GCCAAAGTAGAGCACCAAAGCCCATAATTTGTACCATCACAGATGTATAAGTTTTAAAGGGGAAAAGGGAAATAAGTCAATTCTTGTGTCATAAGATGCT CATCTTAGGCTGGCCTTAAATGTACATTATTCTGTGAAGATGATGTACGAAATGTCATAGAAACAACTATCCTAAAAGGTAACTGTTAGGACCAATTTGC AAGGGATAGGACTCAAGTCTGATTTGGGAGTATGGAATTCAAATGTGGGGTTTATAAGACCTTGGACCTCTCATGGTTCTTATCAATAACCTATTAGGTG TATACCCAAGAATGGTTTAAATCTCTAAGATGTAATTTATGTTTGTGACTGTGTTGGGTCTTTTATTTGCTACGCAGGTAGACGAGCTTTTGAAACAAAG GGACAGTATCCATTCTTCCTTCACCATTGTCAAGTCAACCACAATTAGTGGGAGTGCTAGTAATTTAAGCAATGGAAGTTCTAGCAAAATTTCTGGTGAA GAGAGCCCTGAGGATGGAGGGTCAGATGAGAAGGATAAATCAGGCAAAAAGAAATGGTTTAACCTCAATCTCAAGGGTTCTGATAAGAAGTTGATTTAAA AGTCACTTGATTTTGCTGGTCTCTATCAATTACAGTCATGGCATCAAACTTAGCATCCTGTGGATGTTCCCCTTGCATTATATATCTGGAACATGTCCCT TCTCTGCTTGGTTACACCAAGGTTGTAAACTGGTTTTGTTAGTCTATTCATTAGTATTGCACTCTATGTCAAAGGCATATATATATGTCTCTACCTGTTT CCAATTTTTTGTAATCCAATTCCAATGTAATACTGTGGACATATATAGTTTTGATACTGTAATGGTAATATTCATTCTTGTAACAGTTTTGTTCATCATT GCTCTA BLAST |
| Tissue | flowers |
| Gene name | LI_gene_68667; |
| Additional information | details; |
| FPAB | abscising flower pedicels |
| FPNAB | non-abscising flower pedicels |
| LF1 | lower flowers stage 1 |
| LF2 | lower flowers stage 2 |
| LF3 | lower flowers stage 3 |
| LF4 | lower flowers stage 4 |
| UF1 | upper flowers stage 1 |
| UF2 | upper flowers stage 2 |
| UF3 | upper flowers stage 3 |
| UF4 | upper flowers stage 4 |
Annotations of Ll_transcript_185598
| Blastp | Chaperone protein dnaJ 15 from Arabidopsis with 86.45% of identity |
|---|---|
| Blastx | Chaperone protein dnaJ 15 from Arabidopsis with 86.45% of identity |
| Eggnog | ATP binding to DnaK triggers the release of the substrate protein, thus completing the reaction cycle. Several rounds of ATP-dependent interactions between DnaJ, DnaK and GrpE are required for fully efficient folding. Also involved, together with DnaK and GrpE, in the DNA replication of plasmids through activation of initiation proteins (By similarity)(COG0484) |
| Kegg | Link to kegg annotations (AT1G68370) |
| CantataDB | Link to cantataDB annotations (CNT0000899) |
| Mirbase | - |
| Ncbi protein | Link to NCBI protein (XP_019441409.1) |
| Pfam | DnaJ domain (PF00226.30) |
| Rfam | - |
| GO | Links to GO: General; Genes and gene products; Annotations; Ontology; |