| Id Trinity | FTRINITY_DN57438_c1_g1_i16 |
|---|---|
| Name Transcript | Ll_transcript_185600 |
| Sequence | ATACAAACATTTTACATTACAGAAGCACGACCTTCACCTGAGTCTGAAGAGACAAACGAGTATCTCTTCTTTTTCCCCTCTAAATTCAAAACCTAATCTC ATCCAATCACATGTTTATAACATGTCATATTAGTCTCTGAAACCTGATCATTATTATTTGTTTGTTTTGTTTGAATTGATGTATGCTTTCAAATAGAGAA AGAGGGGTTGGTGTATAAGCATGGGTTCCAAGATAGAAGGATCATCTACCCAAACAAATCGACGTGACCCTTACGAGGTTTTATCTCTCACAAGGGACTC TACTGATCAAGAAATCAAAACTGCTTACAGAAAGCTAGCTCTCAAGTATCACCCGGACAAGAATGCCAGCAATCCTGAAGCTTCAGAACTATTTAAGGAG GTTGCATATTCGTATAGTATCTTGTCTGACCCAGAGAAGAGACGGCAGTATAACAGTGCAGGATTTGAGGCACTTGATGCTGATGGCATGGAGGTGGAAA TTGACTTATCTAATCTTGGGACTGTCAACACAGTGTTTGCAGCTTTATTCAGCAAGCTGGGTGTTCCTATCAAGACTACTATTTCAGCTAATGTACTTGA AGAAGCTCTGAATGGCACTGTTACAGTCAGACCCCTTCCGATTGGAACATCAGTTAGTGGAAAGGTAGAGAAGCAGTGTGCTCATTTTTTTGGTGTGACA ATAAATGAGCAGCAAGCACGATCAGGGATTGTAATAAGAGCTACTTCAACTGCACAAAGCAAATTCAAGTTGCTCTACTTTGAACATGATGCAAATGGTG GCTATGGTTTGGCATTACAGGAAGATAGTGAGAAAACTGGCAAGGTGACATCTGCAGGAATGTATTTCTTACATTTTCAAGTGTACAGAATGGATTCAAC TGTGAATACGTTAGCAATGGCCAAGGATCCTGAAGGGTCTTTCTTTAAAAGGTTGGAAGGTCTTCAACCTTGTGAAGTCTCCGAACTGAAGCCTGGCACT CATATCTTTGCTGTTTATGGTCTGAATAATTTATTTTATTGTTCTTTTAACTGCTTAGGCTATTTTTTAAATTAAACTACTTAAGTTACATTTACACTTG ATTTAAGTTGATATTGTTTAGGGGATAACTTCTTTAAGACTGCTAGTTATACAATTGAGGCAGTATGTGCAAAATCACATGAAGATACCAACAAAAAGCT TATGGACATTGAGGCTCAAATATTAAGAAAGAGGAATGAGCTACGCCAATTTGAAGCAGAATATAGAAAGGCATTGGCACGTTATCAAGAAGTGACAGAC AGATACACAAAAGAAAAACAGTCTGTACGTTCTTTCAACTTGTGCTACAGGACAAGTGCATATCTGGAAATCCACACATTTGCATTATTTTTAGTACTAA TTCTGCCCAGTTTAGTTAAAAATTAGTTGAGAAAATAACATATGTTCCACTTGAGTTGTGAGGCTAGATCAGTTGGGACAATCATATCACTACTTGCTTG GTCGGGCCAAAGTAGAGCACCAAAGCCCATAATTTGTACCATCACAGATGTATAAGTTTTAAAGGGGAAAAGGGAAATAAGTCAATTCTTGTGTCATAAG ATGCTCATCTTAGGCTGGCCTTAAATGTACATTATTCTGTGAAGATGATGTACGAAATGTCATAGAAACAACTATCCTAAAAGGTAACTGTTAGGACCAA TTTGCAAGGGATAGGACTCAAGTCTGATTTGGGAGTATGGAATTCAAATGTGGGGTTTATAAGACCTTGGACCTCTCATGGTTCTTATCAATAACCTATT AGGTGTATACCCAAGAATGGTTTAAATCTCTAAGATGTAATTTATGTTTGTGACTGTGTTGGGTCTTTTATTTGCTACGCAGGTAGACGAGCTTTTGAAA CAAAGGGACAGTATCCATTCTTCCTTCACCATTGTCAAGTCAACCACAATTAGTGGGAGTGCTAGTAATTTAAGCAATGGAAGTTCTAGCAAAATTTCTG GTGAAGAGAGCCCTGAGGATGGAGGGTCAGATGAGAAGGATAAATCAGGCAAAAAGAAATGGTTTAACCTCAATCTCAAGGGTTCTGATAAGAAGTTGAT TTAAAAGTCACTTGATTTTGCTGGTCTCTATCAATTACAGTCATGGCATCAAACTTAGCATCCTGTGGATGTTCCCCTTGCATTATATATCTGGAACATG TCCCTTCTCTGCTTGGTTACACCAAGGTTGTAAACTGGTTTTGTTAGTCTATTCATTAGTATTGCACTCTATGTCAAAGGCATATATATATGTCTCTACC TGTTTCCAATTTTTTGTAATCCAATTCCAATGTAATACTGTGGACATATATAGTTTTGATACTGTAATGGTAATATTCATTCTTGTAACAGTTTTGTTCA TCATTGCTCTA BLAST |
| Tissue | flowers |
| Gene name | LI_gene_68667; |
| Additional information | details; |
| FPAB | abscising flower pedicels |
| FPNAB | non-abscising flower pedicels |
| LF1 | lower flowers stage 1 |
| LF2 | lower flowers stage 2 |
| LF3 | lower flowers stage 3 |
| LF4 | lower flowers stage 4 |
| UF1 | upper flowers stage 1 |
| UF2 | upper flowers stage 2 |
| UF3 | upper flowers stage 3 |
| UF4 | upper flowers stage 4 |
Annotations of Ll_transcript_185600
| Blastp | Chaperone protein dnaJ 15 from Arabidopsis with 85.34% of identity |
|---|---|
| Blastx | Chaperone protein dnaJ 15 from Arabidopsis with 77.05% of identity |
| Eggnog | ATP binding to DnaK triggers the release of the substrate protein, thus completing the reaction cycle. Several rounds of ATP-dependent interactions between DnaJ, DnaK and GrpE are required for fully efficient folding. Also involved, together with DnaK and GrpE, in the DNA replication of plasmids through activation of initiation proteins (By similarity)(COG0484) |
| Kegg | Link to kegg annotations (AT1G68370) |
| CantataDB | Link to cantataDB annotations (CNT0000899) |
| Mirbase | - |
| Ncbi protein | Link to NCBI protein (XP_019428816.1) |
| Pfam | DnaJ domain (PF00226.30) |
| Rfam | - |
| GO | Links to GO: General; Genes and gene products; Annotations; Ontology; |