Id Trinity | FTRINITY_DN57438_c1_g1_i24 |
---|---|
Name Transcript | Ll_transcript_185608 |
Sequence | ATACAAACATTTTACATTACAGAAGCACGACCTTCACCTGAGTCTGAAGAGACAAACGAGTATCTCTTCTTTTTCCCCTCTAAATTCAAAACCTAATCTC ATCCAATCACATGTTTATAACATGTCATATTAGTCTCTGAAACCTGATCATTATTATTTGTTTGTTTTGTTTGAATTGATGTATGCTTTCAAATAGAGAA AGAGGGGTTGGTGTATAAGCATGGGTTCCAAGATAGAAGGATCATCTACCCAAACAAATCGACGTGACCCTTACGAGGTTTTATCTCTCACAAGGGACTC TACTGATCAAGAAATCAAAACTGCTTACAGAAAGCTAGCTCTCAAGTATCACCCGGACAAGAATGCCAGCAATCCTGAAGCTTCAGAACTATTTAAGGAG GTTGCATATTCGTATAGTATCTTGTCTGACCCAGAGAAGAGACGGCAGTATAACAGTGCAGGATTTGAGGCACTTGATGCTGATGGCATGGAGGTGGAAA TTGACTTATCTAATCTTGGGACTGTCAACACAGTGTTTGCAGCTTTATTCAGCAAGCTGGGTGTTCCTATCAAGACTACTATTTCAGCTAATGTACTTGA AGAAGCTCTGAATGGCACTGTTACAGTCAGACCCCTTCCGATTGGAACATCAGTTAGTGGAAAGGTAGAGAAGCAGTGTGCTCATTTTTTTGGTGTGACA ATAAATGAGCAGCAAGCACGATCAGGGATTGTAATAAGAGCTACTTCAACTGCACAAAGCAAATTCAAGTTGCTCTACTTTGAACATGATGCAAATGGTG GCTATGGTTTAGCGTTACAGGTAGTGTTTGTTCTTCCAGTTCTTATGCATTTACTTCCTCCTCCCCCTTGACTTGTTGCTTTACCAAACTAATGATAATA AATTGAAATAATTATAAACTTGGTATTATTAATGTTTTCATCAACTGTGATTGTGTCTCTAGAATGTTGGATTATTATAGTATCATCGATTAACATATAG CTCAACTTCTCTATCTCTTTCTTCCCCTTTCCCTTGTAGCATAACATTGGTAGCCATTGAGCATCCAAAATCAATCATTTGGTGTGAATTTAGAAGAAAA AAAGTGGGGGCATGACAGAAGGAATTTCAATACTATGGTTGTTGCTATTAAGCCTTTGGCCTTGTTGGTTCCTGTGCCTCTCATTTGGACGAAATCAAGT GCCCATGAATGAATGTCAAAATGTCTTGCAACTGGATTATGTAAAGTTAAGTGCCTGCTAGGCTAAAAAGTCAGAGAAAAACGTAACACAAACATTTGGA GAGTGTGCATTGTGTAGTCTGCATCCTGTAACCAGTGGTTTTATGGGTCATGTTAAGATACATTATTCGAGTTAATCTTAAGCTCTTTGTGATTGATTTG TATATTGCATAAACTGCAACTAGTCATTTATTGATGTAGTTCTTGTGCAAATTACAATTAGGTGTGTATCTAGTTAGTGGTGTATGTAACTGTATTTCTG TACAGGAAGATAGTGAGAAGACTGGCAAGGTGACATCTGCAGGAATGTATTTCTTACATTTTCAAGTGTACAGAATGGACTCAACTGTAAATGCGTTAGC AATGGCCAAGGATCCTGAAGGGGCTTTCTTTAAAAGGTTGGAAGGTCTTCAACCTTGTGAAGTCTCAGCACTAAAGCCTGGCACTCATATCTTTGCTGTT TATGGGGATAACTTCTTTAAGACTGCTAGCTATACAATTGAGGCAGTATGTGCACAATCCCATGAAGATACCACCCAAAAGCTTATGGACATTGAGGCTC AAATTTTAAGAAAGAGGAACGAGCTACACCAATTTGAAGCAGAATATAGAAAGGCAGTGGCACGCTATCAGGAAGTGACAGATAGATACACAATAGAAAA ACAGTCTGTAGATGAGCTTCTGAAACAAAGGGACAGTATTCATTCTTCCTTCACCGTTGTCAAGTCAATCAATATTAGTGGGAGTGCTAGTAATTTAAGC AATGGAAGTTCTAGCAAAATTTCTGGTGAAG BLAST |
Tissue | flowers |
Gene name | LI_gene_68667; |
Additional information | details; |
FPAB | abscising flower pedicels |
FPNAB | non-abscising flower pedicels |
LF1 | lower flowers stage 1 |
LF2 | lower flowers stage 2 |
LF3 | lower flowers stage 3 |
LF4 | lower flowers stage 4 |
UF1 | upper flowers stage 1 |
UF2 | upper flowers stage 2 |
UF3 | upper flowers stage 3 |
UF4 | upper flowers stage 4 |
Annotations of Ll_transcript_185608
Blastp | Chaperone protein dnaJ 15 from Arabidopsis with 84.77% of identity |
---|---|
Blastx | Chaperone protein dnaJ 15 from Arabidopsis with 84.77% of identity |
Eggnog | ATP binding to DnaK triggers the release of the substrate protein, thus completing the reaction cycle. Several rounds of ATP-dependent interactions between DnaJ, DnaK and GrpE are required for fully efficient folding. Also involved, together with DnaK and GrpE, in the DNA replication of plasmids through activation of initiation proteins (By similarity)(COG0484) |
Kegg | Link to kegg annotations (AT1G68370) |
CantataDB | Link to cantataDB annotations (CNT0000899) |
Mirbase | - |
Ncbi protein | Link to NCBI protein (XP_019452413.1) |
Pfam | DnaJ domain (PF00226.30) |
Rfam | - |
GO | Links to GO: General; Genes and gene products; Annotations; Ontology; |