Id Trinity | FTRINITY_DN57438_c1_g1_i25 |
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Name Transcript | Ll_transcript_185609 |
Sequence | ATTACAGAAGCGCGACCTTCACTGAGTCTGAAGTGGACAAAGGAGTTTCTTTCTCTTTTTTCCTTCAAATTTCAAAACCTAATCTCACACCTTTTTCTCT TCCTCATTTCACTCGCTTAGAGAAAGAGAAGCTGGTGTATGGTGATGGGTTCGAAGATTGAAGGACAATCTACGCCAGCAAATCGACGTGATCCTTATGA GGTTTTATCTGTAACAAGAGACTCTACAGATCAAGAAATCAAATCTGCTTACAGAAAGCTAGCTCTCAAGTATCACCCTGACAAGAATGCCAGCAATCCC GAGGCTTCAGAACTATTTAAGGAGGTCGCATATTCTTACAGCATATTGTCTGACCCAGAGAAGAGAAGGCAGTATGATAGTGCAGGATTTCAGGCACTTG ATGCTGATAGCATGGACATGGAAATTGACTTATCTAATCTCGGGACTGTCAACACAGTGTTTGCGGCATTATTCAGCAAGCTGGGTGTCCCTATCAAGAC TTCCGTTTCAGCCAATGTACTTGAAGAAGCTCTTAATGGCACTGTTACCGTCAGACCCCTACCCATTGGAACATCAGTTAGTGGAAAGGTAGAGAAGCAA TGTGCTCATTTTTTTGGCGTGACAATAAATGAGCAGCAAGCTCAGTCAGGGATTGTAATAAGAGCTACTTCAACTGCACAAAGCAAATTCAAGTTGCTCT ACTTTGAACAAGATGCAAATGGTGGTTATGGTTTGGCGTTACAGGAAGATAGCGAGAAAACTGGCAAGGTGACATCTGCAGGAATGTATTTCTTACATTT TCAAGTGTACAGAATGGATTCAACTGTGAATACGTTAGCAATGGCCAAGGATCCTGAAGGGTCTTTCTTTAAAAGGTTGGAAGGTCTTCAACCTTGTGAA GTCTCCGAACTGAAGCCTGGCACTCATATCTTTGCTGTTTATGGTCTGAATAATTTATTTTATTGTTCTTTTAACTGCTTAGGCTATTTTTTAAATTAAA CTACTTAAGTTACATTTACACTTGATTTAAGTTGATATTGTTTAGGGGATAACTTCTTTAAGACTGCTAGTTATACAATTGAGGCAGTATGTGC BLAST |
Tissue | flowers |
Gene name | LI_gene_68667; |
Additional information | details; |
FPAB | abscising flower pedicels |
FPNAB | non-abscising flower pedicels |
LF1 | lower flowers stage 1 |
LF2 | lower flowers stage 2 |
LF3 | lower flowers stage 3 |
LF4 | lower flowers stage 4 |
UF1 | upper flowers stage 1 |
UF2 | upper flowers stage 2 |
UF3 | upper flowers stage 3 |
UF4 | upper flowers stage 4 |
Annotations of Ll_transcript_185609
Blastp | Chaperone protein dnaJ 15 from Arabidopsis with 87.22% of identity |
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Blastx | Chaperone protein dnaJ 15 from Arabidopsis with 78.27% of identity |
Eggnog | ATP binding to DnaK triggers the release of the substrate protein, thus completing the reaction cycle. Several rounds of ATP-dependent interactions between DnaJ, DnaK and GrpE are required for fully efficient folding. Also involved, together with DnaK and GrpE, in the DNA replication of plasmids through activation of initiation proteins (By similarity)(COG0484) |
Kegg | Link to kegg annotations (AT1G68370) |
CantataDB | Link to cantataDB annotations (CNT0000899) |
Mirbase | - |
Ncbi protein | Link to NCBI protein (XP_019441409.1) |
Pfam | DnaJ domain (PF00226.30) |
Rfam | - |
GO | Links to GO: General; Genes and gene products; Annotations; Ontology; |