Ll_transcript_185612

• Id Trinity: FTRINITY_DN57438_c1_g1_i28
• Name Transcript: Ll_transcript_185612
• Sequence: ATACAAACATTTTACATTACAGAAGCACGACCTTCACCTGAGTCTGAAGAGACAAACGAGTATCTCTTCTTTTTCCCCTCTAAATTCAAAACCTAATCTC ATCCAATCACATGTTTATAACATGTCATATTAGTCTCTGAAACCTGATCATTATTATTTGTTTGTTTTGTTTGAATTGATGTATGCTTTCAAATAGAGAA AGAGGGGTTGGTGTATAAGCATGGGTTCCAAGATAGAAGGATCATCTACCCAAACAAATCGACGTGACCCTTACGAGGTTTTATCTCTCACAAGGGACTC TACTGATCAAGAAATCAAAACTGCTTACAGAAAGCTAGCTCTCAAGTATCACCCGGACAAGAATGCCAGCAATCCTGAAGCTTCAGAACTATTTAAGGAG GTTGCATATTCGTATAGTATCTTGTCTGACCCAGAGAAGAGACGGCAGTATAACAGTGCAGGATTTGAGGCACTTGATGCTGATGGCATGGAGGTGGAAA TTGACTTATCTAATCTTGGGACTGTCAACACAGTGTTTGCAGCTTTATTCAGCAAGCTGGGTGTTCCTATCAAGACTACTATTTCAGCTAATGTACTTGA AGAAGCTCTGAATGGCACTGTTACAGTCAGACCCCTTCCGATTGGAACATCAGTTAGTGGAAAGGTAGAGAAGCAGTGTGCTCATTTTTTTGGTGTGACA ATAAATGAGCAGCAAGCACGATCAGGGATTGTAATAAGAGCTACTTCAACTGCACAAAGCAAATTCAAGTTGCTCTACTTTGAACATGATGCAAATGGTG GCTATGGTTTAGCGTTACAGCATAACATTGGTAGCCATTGAGCATCCAAAATCAATCATTTGGTGTGAATTTAGAAGAAAAAAAGTGGGGGCATGACAGA AGGAATTTCAATACTATGGTTGTTGCTATTAAGCCTTTGGCCTTGTTGGTTCCTGTGCCTCTCATTTGGACGAAATCAAGTGCCCATGAATGAATGTCAA AATGTCTTGCAACTGGATTATGTAAAGTTAAGTGCCTGCTAGGCTAAAAAGTCAGAGAAAAACGTAACACAAACATTTGGAGAGTGTGCATTGTGTAGTC TGCATCCTGTAACCAGTGGTTTTATGGGTCATGTTAAGATACATTATTCGAGTTAATCTTAAGCTCTTTGTGATTGATTTGTATATTGCATAAACTGCAA CTAGTCATTTATTGATGTAGTTCTTGTGCAAATTACAATTAGGTGTGTATCTAGTTAGTGGTGTATGTAACTGTATTTCTGTACAGGAAGATAGTGAGAA GACTGGCAAGGTGACATCTGCAGGAATGTATTTCTTACATTTTCAAGTGTACAGAATGGACTCAACTGTAAATGCGTTAGCAATGGCCAAGGATCCTGAA GGGGCTTTCTTTAAAAGGTTGGAAGGTCTTCAACCTTGTGAAGTCTCAGCACTAAAGCCTGGCACTCATATCTTTGCTGTTTATGGGGATAACTTCTTTA AGACTGCTAGCTATATGATTGAGGCAGTATGTGCAAAATCACATGAAGACACCACCCAAAAGCTTATGGACACTGAGGCTCAAATTTTAAGAAAGAGGAA TGAACTGCGCCAATTTGAAGTAGAATATAGAAAGGCACTGGCACACTATCAGGAAGCGACAGATAGATACACAAAAGAAAAACAGTCTGTAGATGAACTT CTGAAACAAAGGGATAGTATCCATTCTTCTTTCACTGTTGTCAAGTCAACGACTAGTAATTTAAGCAATGGAAGTTCTAGCAAAATTTCTGGTGAAGGGA GCCCTGAGGATGGAGGGTCAGATGGAAAGGATAAATCTACCAAAAAGAAATGGTTTAACCTCAATCTTAAGGGTTCTGATAAGAGTCTGCTTTAAAATCC ACTTCATTTTTCTGGTCTCTTATCAATTACAGTCATGACATCAAACTTAGCACCCAGCAGATTTTCGGCTTGCATTATATGTCTGCAATATTCTCTTTCT TTGCTTGGTTCCACCAAGGTTGTAAACTGGTTTATTAGTCTACAGTATGTGGTTGCACTCTAAGGTATATGTCTCTTCATGTTTCAATTTTTTTGTCATC TAATGATTCTCATACAATTCCTTTGTAGCATCTTGAACATAATATAGTTCTGATATTGTAATGATACATTCATTCTTGTAGCAGTTTTGTTCATCATTGC TCTATCATCTATGACACCCCTTGGAGGATATTTCATTAATCTGCATGTGTAATAATTGCATAACCTTACTCAATTATTACTGTAATTTGCATGTGCAATA ATTGCTTACTCAACTTTTGTAACAGTTTTGATTGTGCCTAAGGTGATCTATAAAGCCCAACGCTGGAGCTTAGGAATTATCCCTGACCCATAAATTTGGA TGCAAAAGGAAAATTATAACTATTAAGTAACCTGTGTTTTTAATTACTAACATGTATATCATTC
• Tissue: flowers
• Gene name: LI_gene_68667;
• Additional information: details;

Expression of Ll_transcript_185612

FPKM

• FPAB: 9.6
• FPNAB: 5.8
• LF1: 3
• LF2: 4.5
• LF3: 6.5
• LF4: 5.8
• UF1: 3.1
• UF2: 4.5
• UF3: 6.4
• UF4: 6.5

Labels

• FPAB: abscising flower pedicels
• FPNAB   : non-abscising flower pedicels
• LF1: lower flowers stage 1
• LF2: lower flowers stage 2
• LF3: lower flowers stage 3
• LF4: lower flowers stage 4
• UF1: upper flowers stage 1
• UF2: upper flowers stage 2
• UF3: upper flowers stage 3
• UF4: upper flowers stage 4

Annotations of Ll_transcript_185612

• Blastp: Chaperone protein dnaJ 15 from Arabidopsis with 84.34% of identity
• Blastx: Chaperone protein dnaJ 15 from Arabidopsis with 84.77% of identity
• Eggnog: ATP binding to DnaK triggers the release of the substrate protein, thus completing the reaction cycle. Several rounds of ATP-dependent interactions between DnaJ, DnaK and GrpE are required for fully efficient folding. Also involved, together with DnaK and GrpE, in the DNA replication of plasmids through activation of initiation proteins (By similarity)(COG0484)
• Kegg: Link to kegg annotations (AT1G68370)
• CantataDB: Link to cantataDB annotations (CNT0000899)
• Mirbase: -
• Ncbi protein: Link to NCBI protein (XP_019452413.1)
• Pfam: DnaJ domain (PF00226.30)
• Rfam: -
• GO: Links to GO: General; Genes and gene products; Annotations; Ontology;