Ll_transcript_185618

• Id Trinity: FTRINITY_DN57438_c1_g1_i34
• Name Transcript: Ll_transcript_185618
• Sequence: CTCTTATTCGTCGCATACAAACATTTTAACGGTACAGAAGCGCAACCTTCACCTGAGTCTGAAGGGGCAAAGGAGTATCTTTCTCTTCTTTCCTCTCAAT TCAAAACCTAACCACACAATTAGAATTAGATCCCTAATTCCCAACCTCACATTTTCTCATCCGAGAGGAAAACGAATCCACAACCGATCCAATGAAGCTT TGAATCGCGTGTTGATCTCTTATTGAGATGGATGATGACATGTCAAAATAATCTCTGATACCGGAAAGCTGAAATTTTTGGTTTATTTGAGCTAGCGTGT TTTGAAATAGAGAGAAAGAGAAAGAGGGGGTGGTTTATGGGGATGGGTTCCAAGATAGAAGGACCATCTACCCCAGCAAATCGACGTGATCCTTATGAGG TTTTGTCCGTTACACGGGACGCTACCGATCAAGAAATCAAAACCGCTTACAGAAAGCTAGCTCTTAAGTATCACCCTGACAAGAATGCTAGCAATCCTGA AGCTTCAGAACTATTTAAGGAGGTTGCATACTCTTATACTATCTTGTCTGATCCAGAGAAGAGAAGGCAGTATGACAGTGCAGGATTTGAGGCACTTGAT GCTGATGGCATGGAGGTGGAAATTGACTTATCTAATCTTGGGACTGTCAACACAGTGTTTGCAGCTTTATTCAGCAAGCTGGGTGTTCCTATCAAGACTA CTATTTCAGCTAATGTACTTGAAGAAGCTCTGAATGGCACTGTTACAGTCAGACCCCTTCCGATTGGAACATCAGTTAGTGGAAAGGTAGAGAAGCAGTG TGCTCATTTTTTTGGTGTGACAATAAATGAGCAGCAAGCACGATCAGGGATTGTAATAAGAGCTACTTCAACTGCACAAAGCAAATTCAAGTTGCTCTAC TTTGAACATGATGCAAATGGTGGCTATGGTTTAGCGTTACAGCATAACATTGGTAGCCATTGAGCATCCAAAATCAATCATTTGGTGTGAATTTAGAAGA AAAAAAGTGGGGGCATGACAGAAGGAATTTCAATACTATGGTTGTTGCTATTAAGCCTTTGGCCTTGTTGGTTCCTGTGCCTCTCATTTGGACGAAATCA AGTGCCCATGAATGAATGTCAAAATGTCTTGCAACTGGATTATGTAAAGTTAAGTGCCTGCTAGGCTAAAAAGTCAGAGAAAAACGTAACACAAACATTT GGAGAGTGTGCATTGTGTAGTCTGCATCCTGTAACCAGTGGTTTTATGGGTCATGTTAAGATACATTATTCGAGTTAATCTTAAGCTCTTTGTGATTGAT TTGTATATTGCATAAACTGCAACTAGTCATTTATTGATGTAGTTCTTGTGCAAATTACAATTAGGTGTGTATCTAGTTAGTGGTGTATGTAACTGTATTT CTGTACAGGAAGATAGTGAGAAGACTGGCAAGGTGACATCTGCAGGAATGTATTTCTTACATTTTCAAGTGTACAGAATGGACTCAACTGTAAATGCGTT AGCAATGGCCAAGGATCCTGAAGGGGCTTTCTTTAAAAGGTTGGAAGGTCTTCAACCTTGTGAAGTCTCAGCACTAAAGCCTGGCACTCATATCTTTGCT GTTTATGGGGATAACTTCTTTAAGACTGCTAGCTATACAATTGAGGCAGTATGTGCACAATCCCATGAAGATACCACCCAAAAGCTTATGGACATTGAGG CTCAAATTTTAAGAAAGAGGAACGAGCTACACCAATTTGAAGCAGAATATAGAAAGGCAGTGGCACGCTATCAGGAAGTGACAGATAGATACACAATAGA AAAACAGTCTGTAGATGAGCTTCTGAAACAAAGGGACAGTATTCATTCTTCCTTCACCGTTGTCAAGTCAATCAATATTAGTGGGAGTGCTAGTAATTTA AGCAATGGAAGTTCTAGCAAAATTTCTGGTGAAG
• Tissue: flowers
• Gene name: LI_gene_68667;
• Additional information: details;

Expression of Ll_transcript_185618

FPKM

• FPAB: 8.1
• FPNAB: 2.9
• LF1: 3
• LF2: 2.8
• LF3: 3.5
• LF4: 3.8
• UF1: 2.5
• UF2: 2.7
• UF3: 3.9
• UF4: 3.4

Labels

• FPAB: abscising flower pedicels
• FPNAB   : non-abscising flower pedicels
• LF1: lower flowers stage 1
• LF2: lower flowers stage 2
• LF3: lower flowers stage 3
• LF4: lower flowers stage 4
• UF1: upper flowers stage 1
• UF2: upper flowers stage 2
• UF3: upper flowers stage 3
• UF4: upper flowers stage 4

Annotations of Ll_transcript_185618

• Blastp: Chaperone protein dnaJ 15 from Arabidopsis with 85.86% of identity
• Blastx: Chaperone protein dnaJ 15 from Arabidopsis with 85.86% of identity
• Eggnog: ATP binding to DnaK triggers the release of the substrate protein, thus completing the reaction cycle. Several rounds of ATP-dependent interactions between DnaJ, DnaK and GrpE are required for fully efficient folding. Also involved, together with DnaK and GrpE, in the DNA replication of plasmids through activation of initiation proteins (By similarity)(COG0484)
• Kegg: Link to kegg annotations (AT1G68370)
• CantataDB: Link to cantataDB annotations (CNT0000899)
• Mirbase: -
• Ncbi protein: Link to NCBI protein (XP_019441409.1)
• Pfam: DnaJ domain (PF00226.30)
• Rfam: -
• GO: Links to GO: General; Genes and gene products; Annotations; Ontology;