| Id Trinity | FTRINITY_DN57452_c0_g2_i4 |
|---|---|
| Name Transcript | Ll_transcript_185994 |
| Sequence | GGAAATTATTACTGTGCAAAATTGAAATTACAAAAGGGAAAAAGAAAGGTTACTCGTGTATGTGTGAGACACTGTAGGGTCTCTTTCTCTCCGGTGCTAT CGTCGGAATTTCCGATCACCAAATTGGATCCAATCTCGAAACCCTTATTTTTCCGATACTTACGAAAAATCGTATTTATCTAATAAAATATTCATTCTTT GTTTGTTTCTTAGTTATCCAATCGAATTTTTGAGTGGTTAGGGATGGATGATTACGTCATCAGCGACGACGATTACCAATATTCCGACGATCAAGATGAT TCCGTCGAAGCTTACGAAAACGATGAAACCGATTATCAGTTGATTACTTCCAAAGGCCCAAATACTCAGGTGATTACAAAAGAGTCACTGCTAGCTGCAC AGAGGGAGGATTTGCGGCGGGTGATGGATATGCTATCAGTGAAAGAGCAACATGCACGGACCCTGCTTATTTATCATTGTTGGGATGTGGAGAAGTTGTT TGCAGTGTACGTGGACAAAGGGATATCACATCTCTTTGCTGAAGCTGGTGTTACCATGGATAAACATCATCACTCTGATTCGTCATTCCGTTCTTTAATA ATGTGTGAAATCTGTATGGAGGATGTTCCTATTGATGAAGCAACAGGAATGGACTGTGGTCACAGTTTTTGCAACACATGTTGGACGGAGCATTTTGTTG TCAAGATAAATGAGGGCCAAAGTAAACGCATTAGATGCATGGCTCATAAATGCTATTCCATTTGCGATGAAGCTGTTGTAAGAACGCTGCTTGGTAGAAA GCACCCTGATATGGCCGAGAAATATGAACGCTTTCTTCTTGAATCCTACATTGAAGACAACAAGAGAGTTAAATGGTGTCCTAGCACGCCTCATTGTGGG AATGCAATACGTGTTGAGGATGATGAATTATGTGAGGTAGAATGTTCATGTGGTTTACAATTTTGTTTTAGTTGCTTGTCAGAAGCACACTCCCCTTGTT CATGTCTGATGTGGGAGCTTTGGGCTAAGAAGTGTCAAGATGAATCAGAAACTGTTAACTGGATAACAGGTAATACAAAACCTTGTCCAAAGTGCCACAA GCCAGTGGAGAAGAGTGGTGGATGTAACTTAGTTAGCTGTATCTGTGGCCAAGCATTTTGTTGGGTGTGTGGTGGAGCCACTGGCCGAAATCATACATGG TCAAGTATAGCTGGTCATAGCTGTGGTCGTTACAAAGAGGAAAAATCAGCTGAACGGGCAAAGCGGGATCTAAGTCGTTATATGCACTATCATAGCCGCT ATAAAGCTCACACAGACTCCTTCAAGCTTGAAAGTAAACTTGAAGAGACCATACAGAAGAGGATTGATATTTCAGAAGAAAAAGGTTCCAAACTCAGAGA TTATAGCTGGGTAACTAATGGTCTCTCCAAGCTTTTCAGATCTAGGCGTATCCTGTCATATTCATATGCATTTGCATTTTATATGTTTGGAGATGAGCTT TTTAAGGGCGAAATGCAAGAAACTCAAAGGGAAATAAAACAGAACTTATTTGAGGATCAACAGCAGCAGCTTGAGGCAAACGTTGAGAAGATCTCTAAAA TTTTGGCGGAGCCTTTTGATATCTTTCCTGATGATAAGATTCTGGAGATAAGAATGCAGATAATCAATCTGTCGACTGTTATCGACAAACTTTGTCAAAA AATGTATGATTGCATCGAGAACGATTTATTGGGCTGTCTCCAGAAAACTCACGACATAGCTCTATACAAGTCAAATGGCATAGAGAGGGCATCAGAACAT TCGGTTTTGAGCAATAAAGGCTAGTGATACTGGTAAATATATCTATTGTAGGTTTTTGTTTTAACACTAGAAGCAAAACATTTTGCATTAGCCATTTATG AGTTCTCTCTATAATATTAGAGGGGGAATTTAGTCAACCAATGATTATTCTGACATGTTATCAAATAAGGCTTGGTTTTTGCTATTATTGAACAACTAGT TTCTGATGGTTTTGCTTCGTAGCC BLAST |
| Tissue | flowers |
| Gene name | LI_gene_68754; |
| Additional information | details; |
| FPAB | abscising flower pedicels |
| FPNAB | non-abscising flower pedicels |
| LF1 | lower flowers stage 1 |
| LF2 | lower flowers stage 2 |
| LF3 | lower flowers stage 3 |
| LF4 | lower flowers stage 4 |
| UF1 | upper flowers stage 1 |
| UF2 | upper flowers stage 2 |
| UF3 | upper flowers stage 3 |
| UF4 | upper flowers stage 4 |
Annotations of Ll_transcript_185994
| Blastp | Probable E3 ubiquitin-protein ligase ARI1 from Arabidopsis with 67.3% of identity |
|---|---|
| Blastx | Probable E3 ubiquitin-protein ligase ARI1 from Arabidopsis with 68.73% of identity |
| Eggnog | RING finger) protein(ENOG410XP9Y) |
| Kegg | Link to kegg annotations (AT4G34370) |
| CantataDB | - |
| Mirbase | - |
| Ncbi protein | Link to NCBI protein (XP_019454167.1) |
| Pfam | RING-type zinc-finger (PF13445.5) |
| Rfam | - |
| GO | Links to GO: General; Genes and gene products; Annotations; Ontology; |