| Id Trinity | FTRINITY_DN57455_c0_g1_i12 |
|---|---|
| Name Transcript | Ll_transcript_184925 |
| Sequence | CGTTTTTTGACAGGTCACTGAATTTGTTGGTGCCAGCCAGTTTAAGAAAGCTGTGAAAAAATGATATCTAAATTAATTAATAAGCTGAATAAGGAAATTA GTTAGTGAGATTCAAAAATAATAAAATCTAAGCTTTTATTATTATCATATATTGCAGGTAGATAGAGAGAGAGAGAGGGTGTAAACGCGTATAGCAGTTG AGAAACAGTGATAGATAGATCTGTTTTGGCTTTTGAGAATAAGAAATAATCACAACCGATGGGAGAGGTGGCGCGTGGAGGTGGTTGCGCTCCGATGGAT CTCTTCCGTTCCGAGTCGATGCAACTCGTTCAACTCATCATTCCAATCGAATCCGCTCATCTCACCGTTTCTTATCTCGGTGACCTTGGCCTCCTTCAAT TCAAAGATCTTAATACAGACAAAAGCCCTTTTCAACGGACTTATGCTGCTCAGATAAAAAGATGTGGAGAGATGGCTCGTAAATTACGTTTTTTCAAGGA GCAAATGTTGAAGGCAGATGTTTTACCAGTACATTCTACAACAGTGGTTGATGTGAACATTGATGATCTTGAGGTAAAACTTGCTGAAATTGAGTCAGAG TTAACCGAGATGAATGCAAATGGCGAAAAGTTGCAACGCTCTTACAATGAACTTGTGGAGTATAAGCTTGTTCTGGAGAAGGCTGGTGAATTTTTCCACA CTGCTCAAAGCCGTGCCATAGAGCAGCAGAGAGAAAATGAATCACGCCAACTGGTTGATGAATCTTTGGAAACACCTTTATTGCAAGACCAAGAATTGGT AGGTGATTCATCGAAGCAAGTTAAATTGGGCTTTTTAGCTGGTCTTGTTGCCAGGGAAAAGTCTGTGGCATTTGAGAGAATTTTATTTCGTGCTACCAGA GGCAATGTGTTTTTGAGGCAGTCTGCTGTTGAGAATCCTGTCACAGATCCGGTTACTGGAGAAAAGGTGCTTCCGCCCCCCATTTATTTCACATAAAATC AGGAAATAATAAGTTGTGCAGATGTAGGCCATCCTTAATGCTTATAGATTAACACTTTCATTATACCTTATAGACGGTTCATATTAACATCTTGTCTGGG GGTATGTTAGTCTGGATGCCTCCGATAAGCATAGGGAATATGTTATCTTGGTCAAGCTATTTAGGTTCAACATAGAAATTGAATAGGGGATGAAGTTCAT ACAGATCACAGGTAGCCTTGTCCTTCTATGACATGGTGCATTGAAAGTGTCCTCAGTTAATAGTGATGTTTCTTTTCAAATATGAACAGGGGGTGAAGTT CTTTAGCTGTATTATGTCTAGGATATTCCATCTTATTTTGACTGTTCTGTCAATACTAACATATTATCCGGGCCTGTTGGCATTAGCAAATGAAAAAGTA CACGATCATTGAGTGATAAACTTTCTATCTCTAATTATATTGGAAGGCTTGCTACATCTTTTATTATATTTCTAATATGTTCAGTACTTTACCTATGCAT CTGGTCTCTATTGAAGATACAAACAACATTTTGCATTTTTGCCTGTTGCAATATTTTCTTCTGGTTTGTATTCTATGGTCATTGGTGAATGTTAATCTGC AGACTGAGAAAAATGTATTTGTGGTCTTCTATGCTGCCGAAAAAGCGAAATCCAAGATTCTGAAAATATGTGACGCCTTTGGCGCTAATCGTTACCCTTT TGCAGAGGATGTTGGAAAACAAACTGAAATGATAAAAGAGGTTCGTATTTTGGCTCTTAGTTCTCTGAATGAAAACTTATGGCAACTCATTTTAATTGTT TCAAGCTACTGCTGTACTTCTTTAAAGCAGCAAATGTGAATTTAGATCGATAGCTGCAACTCCAAATATTATTCCTTCACAATTCCATTTCTCTGACTGT GTGCTCGTTCAATGATTCTTAAAAATGGAAGTATTTATTAAAGAACATTTTAATCTTTTTCGGTATAAGAACAAGAAATATGCAGCAAGGCGTGCTACTA TAGAATCTTCGCAAATATGATTGCTTGCCACTATAAAATCTTTTTATTCATGTGTAACGATGAGATTCTTCTACCTAAATTGTTTCCTTCTATGGTTTAT TTGTAAGAAGTCTATACAATATCTGTTTGTACAACTTATTAGGTAACTGCAATTTTTGGGTATTATGTCTATACAATTTTAACAAATTCAAAAGCAGGTA TCCCGAAGAATTTTAGAATTGAAGACAACAATAGATGCTGGACTGCTGCATCGGGCTACCTTGCTACAGACTATTGGTGATCAATTTGAGCAATGGAATC TTTTGGTGAGGAATGAGAAATCTATTTACCATACCCTGAACATGCTAAGCCTTGATGTGACGAAAAAATGTCTTGTGGCTGAAGGGTGGAGTCCTGTTTT TGCAACAAAGCAGATCCAAGATGCCTTACACCGGGCAGCAATTGACGCTAACTCTCAAGTTAGTGCCATTTTGCAAGTTCTGCATACTAGAGAGTTGCCA CCTACATATTTCCGTACAAACAAATTTACTTCCTCATTTCAAGGAATTATTGATTCATATGGGGTTGCGAAGTATCAAGAGGCAAATCCTACTGTGTACA CTGTAGTTACCTTTCCATTTCTTTTTGCTGTTATGTTTGGTGATTGGGGACATGGAATATGTATACTACTGGCTGCTCTATATTTCATAATTCGGGAGAA GAAACTTTCTAGCCAGAAGCTTGATGACATCACAGACATGACTTTTGGAGGACGTTATGTTATTTTAATGATGGCAATCTTTTCAATCTACACTGGTTTC ATATATAATGAGTTCTTCTCTGTCTCATTTGAAATCTTTGGTCCTTCTGCCTATGAATGTCGTGATCTGTCTTGCACGGAAGCTACAACAGTGGGCCTGA TAAAAGCGCGTCGTACTTACCCATTTGGTGTGGATCCTGTATGGCATGGTTCACGAAGTGAATTACCATTTCTAAACTCCTTGAAAATGAAAATGTCCAT TCTTCTTGGGGTTGCTCAAATGAACCTTGGAATTATAATGAGCTTTTGTAATGCTAAATTCTTTAAGAACAGCGTAAATGTATGGTTCCAGTTTGTTCCC CAGATAATATTTCTCAACGGTCTATTTGGCTACCTATCCCTTCTTATTATTGTGAAGTGGTGCACTGGTTCTCAAGCTGATTTGTATCATATATTGATCT ACATGTTCCTGAGCCCGACAGATGATTTGGGTGAAAACCAACTCTTCGTTGGTCAGAAATATCTGCAGATTACACTTTTGATTCTGGCCTTTATCGCTGT GCCTTGGATGCTGATCCCAAAACCTTTTATTTTGAAGAAGCAACATGAAAATAGGCACGGGGTTGAATCTTATGCACCACTTCAAACGACAGAGGAAAGC TTGCAAGTAGAGTCAACTCATGATTCCCATGGTCATGAGGAATTTGAGTTCAGTGAAGTCTTTGTACATCAACTCATACACACCATAGAGTTCGTACTTG GAGCAGTTTCTAATACAGCTTCTTACCTTCGTCTATGGGCCCTTAGTCTTGCTCATTCAGAGTTATCAACTGTATTCTACGAGAAGGTTCTGCTAATGGC ATGGGGGTATGTTAAGTTTATGGACTTCTGTTATATTTCCTTGATTTTGGTTCATTGGGATTGTGGAGGATGAGTGTTGAACCTTCAACACACGATGGGC AGCTATTGCAAGATTTATATGAATAGAAACCCATCACTGTTAAAATGCACTTATTTGATTTACGAAATTGGAGTTTTTAGAAGTGAGTAAGATTTACGAA AATGGTATGCACTGGGTGTACTGATCACCGTTACTTGTTGTTGCTCATTATTCATTCTCTACAACCCATCTCTTCTTTCCTTTAAAGTTAAACAGTAGTA AATGACTGGTAACTGCTCTTCCTGGTGTGACAGGTACCATAACGTGTTTATCCTGATAATCGGTCTCATTGTCTTCATATTCGCTACGGTTGGAGTGTTG CTTGTGATGGAAACTCTGAGCGCCTTCTTGCATGCTTTACGTCTTCACTGGGTGGAGTTCCAGAACAAGTTTTATGAGGGGGATGGTTACAAGTTCAATC CTTTCTCATTCTCATTGATAGAAGATGAGGATGAGTGATGGGTTTAAAATGACATTAATAAGGTGTGGTTATGTAGCTTTGGACTTTTATTGATTCTTTC ATTTGCCTTTTCAATTCAGTTATCTGAGGATTGTATATTGTGTAATCCTGGGAGCCTTTTCATACAACACCATTATGCATCTTTGTTTATTGATGCCTTT GAGAGAATAAATGTATCTCCCTATTAGGGGAGTAACTTTGTGTGATCTTCTAGGCTCCCAGGCATGGCGGTGTAATAATTATAAGATAACTTAATATTTT ATATACTTTTGTTTTCTTTTCTAAAAAATGATTGATATTTATTATGATATCATAAGATGCATACTATCATAAGAGAATGGTGAGGCTTTTGTACTCTTAA TTATAGTTCGACCAGCGGTGATGTAAAAAACAAAAGTAAGGATTAAGTATGGGTGAATTGAATTGATATGGAAA BLAST |
| Tissue | flowers |
| Gene name | LI_gene_68773; |
| Additional information | details; |
| FPAB | abscising flower pedicels |
| FPNAB | non-abscising flower pedicels |
| LF1 | lower flowers stage 1 |
| LF2 | lower flowers stage 2 |
| LF3 | lower flowers stage 3 |
| LF4 | lower flowers stage 4 |
| UF1 | upper flowers stage 1 |
| UF2 | upper flowers stage 2 |
| UF3 | upper flowers stage 3 |
| UF4 | upper flowers stage 4 |
Annotations of Ll_transcript_184925
| Blastp | V-type proton ATPase subunit a3 from Arabidopsis with 69.03% of identity |
|---|---|
| Blastx | V-type proton ATPase subunit a2 from Arabidopsis with 76.73% of identity |
| Eggnog | ATPase 116 kDa subunit(COG1269) |
| Kegg | Link to kegg annotations (AT4G39080) |
| CantataDB | Link to cantataDB annotations (CNT0001114) |
| Mirbase | - |
| Ncbi protein | Link to NCBI protein (XP_019454213.1) |
| Pfam | V-type ATPase 116kDa subunit family (PF01496.18) |
| Rfam | - |
| GO | Links to GO: General; Genes and gene products; Annotations; Ontology; Links to GO: General; Genes and gene products; Annotations; Ontology; |