| Id Trinity | FTRINITY_DN57682_c1_g1_i7 |
|---|---|
| Name Transcript | Ll_transcript_149757 |
| Sequence | CTTGAACAAAGGGCAAAGGAAAAAGAAAAACATAAAAGCAAAAAAACGAAAGTGTTCTTCACTTTTCAGATTAGCACTACACATCGTTTATTACTCCATT CTTCTCTGCACTTCACTGCTCATTTTACAAATCGCTTCAATTGTGTTGAAATGGGCTCTGTAGCTGAAACACAAAGAACTCTGTACCCGTATGTAACGGG ATCATCTGTGGTCGCAATCAAATACAAAGATGGGATTCTCATGGCTGCTGATATGGGAGGTTCCTATGGGTCTACACTACGATACAAGAGCATTGAGCGC TTGAAGCCTATTGGGAAGCATTCCCTTCTCGGTGCAAGTGGGGAAATAAGTGATTTTCAGGAGATTCTACGCTACCTTGACGAACTTATCCTTTATGACA ACATGTGGGATGATGGAAATTCTCTAGGGCCTAAGGAGGTGCACAATTATTTGACTCAAGTGATGTATAACAGGCGGAACAAGTTCAACCCTTTGTGGAA CTCCCTAGTGCTTGGTGGCGTGAAGAATGGACAAAAGTACCTTGGCACAGTTAACATGATTGGGATTAATTATGAAGACAATCATGTAGCCACTGGGCTA GGAAACCATCTTGCTAGGCCAATTCTCCGTGATGAGTGGCATGAAAATTTGACCTTTGAAGATGCTGTCAAGTTGCTGGAGAAATGCATGCGTGTGCTTT TGTATCGTGATAGGTCTGCTGTCAACAAGATACAGGTTTTATTCTTTTTCCTTTTTCCTATTTCACCATGTTCCCTCCAATAGCATAGGAATGAAATGTG TACCTAAATCTTAAGAAAGCTGCAATGGTGCATAATCCATATGGATGTTGTATGCTCCCGACTTTGGTCTACATGAAAAAAGTGGCATGCAGAATGAATT GAAGTATCATCATAAAAAGTGAATTCAAAATTCACAAATAAATTTTGACAAGTTTTGGACTTTTGGGTTACCAATGAAATTTGGGTTGAATAATGATTGG TTTCTGGTTGGATTTGTTCCATAGGTCTCAGTTTCTTCTGCTGGCACAGGCCAAATAACTTTTAAGGCAATTTAAGTAGTGGGGGCTAGTAAGCTCTAAA TCTCATGGTACCTAAATGACTAAGTCTTTAAGTGACCCTTTTTGCTTGGGATTGTACCCTCCTTTCTCTAAATCCTATGATGGCCACTTGGCACAAAAAG GTAAAGAAGTTGAAATTTTTTAGAAGGCAGATACCCTTACTTATCTTATGTGGAATTACTTAGTATGTTTTGCCTGGTATGGTTAGAATTATTTAATCTG GCCAGCTTAGCTCATCATAGCATAGAATAGAGTCAAGGATTAAAGGTGTTATCTTAGCTAGAACAAGCTTGTAGTGCATATTGACAGGAAAGAGGGGAAA GGGTATATTTGATATAATAATATAGCTATTAGTTTGTGGTTTGTTTCCTTTATGTGGATGCACAGGGGAACCAAAGTAAGATCTTAAATTTACTTGTTAC AAATAATATCAGTACTCGTACAGTCTTGCTTATTACCCAGTTATGGGATTATAGAAAAGAAATGCATTGCCAATGAAGTAGCTCAACTGGCACTGGCCCA ATTCTTATAGACTAGGATGTGATGTTGATTGTGAGGTTTGATTCGTCATCGGTCCACCTTTTCTAATCCTCCACTTAGTTGCTTTCACCTCCTAACCAGC CAAAATGAAAACGAATCCATATAAATGAGTTATTTACAAAACTATCTGGAAGACGAGAGCACCTAGAACTAGATGATTATTTTTGTCAGTTCCTACTTCC CTGACATTATGACACCCAAGGTGCAATACTTTCAAGGAATTGTTCAATATACAAGCATGTTCATATTTTCTCATCAAGGTGCAAATGTATCATTTCTTTG CTTTTGCCTTCTGTTTAGTCTTGTTGGTGATCATTATGACAGCTAACCACACATTGCTTCTTATTTTATATGCCGTGGTGCTAGGAATGTACTAAATTGC AGGGAGGGTTTATTGCACCCTTTCTATCGCATGTATATCACACCTAGATCTGACTCGTCTTCCTTCGTACATTTTTATATTCTTATAGTTTTGATTGAAT TGCCAATTGCATGGATGATTGGGTTATCATACTTAGTGAATCTGTTGTGTTGAATTTTCAGATATCTAAAATTACTGAAGAAGGTGCTACCTTGTTCCCA CCATTCTCATTGAAAACACACTGGGAGTTCTCTGCTTTCAGGAATCCAACAGCAGGTGCTGAAGGTTCATGGTAGGTTGATGGGCATGGAATCAAATGAA ACTGAAATGTTGAATGGATATTAAATCTTTCCAATTCCAAAGGGTACTTTCATGGTGTTAAATGGATATGGAGTGAAATAACTGATGTGGGTTTATGTTT TCAGTAAAGTTTTTATTAATTGACTTGACATCTCTTCCAGAGTAATGGTAGTTCATCTAGTTAGAAGAAAACTACCAGAATTTTAATTTAACATCTTCAG TTTAGTCGCAGCTATTTGTGTTTAAGCCTGAATGGATGGTAAATGTTGTGTTAGACGGTCCACCCCAACATAAAACTGTCAATTTTTTTTGAGAGGATCT ATTTACTTCAAGAGTAAGTTAAAAAAACATTCTCCATATATTAGTTGTCTATTCTATGAAAATATAATGGTAAAGATTTACTTATTAATTCAAATAATTG GATTTTTCTAAAATGAACGACAAATATGTGGAGTATGTTTTTTTGAGACCAAGCATGCCTATTTCTACCCAAAGTCAATATGCACTAGTTATACAGTAGG GGTGAGCAGGACCCGATCCTACCTGCTCACTTGGCACGGCCCGATCCGATCGTGATCGGGTCCAAATAGGGTTGGGTCTAGGGTTAGGTTCGGGTTAAAA AATTAGACCCGATCAATATTTAGGGCCGGGTAGGGACCAAGGâBLAST |
| Tissue | flowers |
| Gene name | LI_gene_70722; |
| Additional information | details; |
| FPAB | abscising flower pedicels |
| FPNAB | non-abscising flower pedicels |
| LF1 | lower flowers stage 1 |
| LF2 | lower flowers stage 2 |
| LF3 | lower flowers stage 3 |
| LF4 | lower flowers stage 4 |
| UF1 | upper flowers stage 1 |
| UF2 | upper flowers stage 2 |
| UF3 | upper flowers stage 3 |
| UF4 | upper flowers stage 4 |
Annotations of Ll_transcript_149757
| Blastp | Proteasome subunit beta type-4 from Arabidopsis with 84.82% of identity |
|---|---|
| Blastx | Proteasome subunit beta type-4 from Arabidopsis with 84.82% of identity |
| Eggnog | The proteasome is a multicatalytic proteinase complex which is characterized by its ability to cleave peptides with Arg, Phe, Tyr, Leu, and Glu adjacent to the leaving group at neutral or slightly basic pH. The proteasome has an ATP-dependent proteolytic activity (By similarity)(ENOG410YAMA) |
| Kegg | Link to kegg annotations (AT1G56450) |
| CantataDB | - |
| Mirbase | - |
| Ncbi protein | Link to NCBI protein (XP_019448711.1) |
| Pfam | Proteasome subunit (PF00227.25) |
| Rfam | - |
| GO | Links to GO: General; Genes and gene products; Annotations; Ontology; Links to GO: General; Genes and gene products; Annotations; Ontology; |