| Id Trinity | FTRINITY_DN57768_c3_g3_i7 |
|---|---|
| Name Transcript | Ll_transcript_214356 |
| Sequence | ATTTTTTGTTGGTAAAAGCAATGGTATATTTGGGAGATTAATCTTAGAACATCGTAAGATTCCATAGGAAAATTTGTCCCCTCTGTAAAACACTACCACC ACTCTTTTTTATTTATTTATTTATATATTTGTGGTCTTAAGGGGAATAAAGGAAAAGAAGAAGTAGCAGCTGCAAAAGAAAAAGGAAAAAAGTGATTATT TTTCACTTTTAGCTTATTGTTTGTGAGAAGAAAAGCTTTTGTTAACCAATAATATCACAGCACACAACACAAGCTTAGTTACTTCCCTTTCCAACGTTGT TATTGTTGTTACCAAGAAGCCAAGTTTCCACTTTTATGTTTTAATACAAACACACTTTCTCTTTTTCTCATGTTCTTCTTCAACTTCATTGTTCTTACCT TCTTCTTCTTATGTGAGTTATAGTTCTTCTTCTTCTTCTTCTTATGGATGAGTCTGAGAAACTAAGATTGGTGAGGTGCCCCAAGTGTGATAATCTTCTT TCTGAACTTGCTGATTATTCTGTTTATCAATGTGGTGGTTGTGGTGCTGTTCTCAGAGCAAAGCACAAGGGTTATGTAAGTGGTAGCTTGTCGGAGAAGT CGGATGAGGGTAAGATCGAAGATTCTGCAAAATCGGATAGTTCGATGGAAGAAGGCTTAGCTGATTCCATTCATGATACTTTAGATGTTGATACTAAGTT CAATAGTAATGAAAAGGATGTAAAGAATGCAAACAATGGACATGAAAGATTTCCGAATCAACCCGATGGTAAACAAACCAATGAGAAAGGAGTTTTTGAG AATGGTGTTGATGTCAATGTCAACAAAAATAAAGTGAAAAAAGCAATAGGAAGAGAACAAGAGGAACCGAAATCTCAAACTTGTCATGAAAATGGGTCTG CATTCGCTGGGAAAATGACGTCTAATTCGCAAAATGGACAACGAAGCGAGGCAGAGAGGTTTTGGAGAAAGCCGAGAACCGAAATGGAAAGTGTGAGATT TTCCACTTCGAATTATCCTTATGAGGGAAATTCAAGTTTTTCTCATAGCTATGTTGAACCGTGGCGGCGTCATGAAGAAACAGATGGTGCAAACAAGGTT CAACACCTTGAGCAAGATCGAGCGGAGCTTCTAAGGAAGCTGAATGAGTTGAAGGGTCAGCTGAGTCAGTCTTCCGAAGTGGTTAAGAGCACGAAAGAAA AGGTCTGGCTTGATAAAAGGATGATTCCTCCAAATCCTTATGCTGCCTCTGATCCTTGGTTTTCAGATGGATCGCCTCGGTTGAACAGAAATGCAAGGCA ATTTTTTGGTACCGATAAGCATGTGGCAGGTTCCAATTATTTCAATCATCATCATGATCCAGCATATCCTGATACAGGTGGTCATGAAATGGCTATGCCA AATTTCCATCCTTCGATGCACAATCCGAATCACATTATGGGGTATGGAGATCCTTTTGCGGCCCAAGTTCTAGGGAGGGGTCCACAATCGCATCAGCTAA CTCATCAATATCCCCCAAAACCCTTGCATCCCTACTTTTCCGGACACTATGTTAATACCAATCCAGATTCATATGAACCATTTTCCCATAGTTCAATGCT TCACCAGCCGTCTTGCTCGTGTTTTCATTGCTATCAAAACAAACGAAGAGGTTTAGTGCCGGCACCTCCTGTTCCAAATGATCCTATGTTATTCAATCAT GAGTTCCCAGCGGCATTTGGTCCACATATTCATAATTCTAGAACGGCTGCAATTCCTCCAGCAAGTTTTCGCGAAAAGCAATTACATACAAGATGGCCTA ATGATTTAAACTCTGAGATCAGTGGTTTTGTTCGAAGCCGTCCTCGGAAAGTGATGCTAGCCAATTCCTGTCAGCATTACCGTCCCGTAGCTGGTGGTTC GCCCTTCATCACATGTAATAATTGCTTTGAGTTACTGCAACTGCCTAAAAAGGCACTGGTTGTAGCGAAAAATCATCAGCAGAAAGTGAAGTGCAAGGCT TGTTCATCAAAAATCAGCATTGCTATCATCAACAAGAAGCTAGTTATTACTCATGATTCAGAGATGAAGGCAATTCGCACAAGGGTTGACGATTTCTCAA ATGAAGTTGTCAGTAGCCGTGTGTCACGTTCCCATGGTCATGTGAACAGGGTTGGTGCTAACTTCTCATCCGATGATTATTCCGGTTATGATTTTCATTC ACTAGATAGGGAACCTCATCTGCTGGTTGCTGACCTTAGCTTGAACTCTAACAAATCCGAGGACATGCTAAGTTTTAATTCTTCTCCTATTATGTCCGAA GATGAAGATAGTCCTCAAGTGGTTAATAAGTCTATTCATCAGCCAACCAAAGCATGTATGTCCCCTCCACCGGCCGGTTCACCTTTGCAAGAGTACCTTG ATTACTCTAGTAACAACAATGCATTGAACCGGTTTGGAAAAGGCAACCAAAGTAGTCGTTCAGAGCAAGAGAAGGTGAAAACCGAGAAGATCACAACACG GCAAAATTCATTGAAAGAGGCTGCAGTTGCAACGGAGATGGATGTCCATGATTATTCCAATATGGGGGTCTCCCACGATTCCGGGGATGCAAAAGGAGAA AATGATCATCCTAGATCCAACAAAGGGGGTGAGTCATTTTTCGCAAACATTATCAAGAAAAGCTTCCTAGATTTCTCTCGATCTAATCAAACAGACGACC GTAGCAAAATCAGTGTCACTGTTAATGGGCAGCCATTATCACATCGCGTGGTTAAGAAGGCTGAAAAACTAGCCGGACCAATCCAGCCCGGAAATTATTG GTACGATTTTCGGGCTGGATTTTGGGGCGGCATGGGTGGACCTTGTCTCGGAATAATTCCGCCATTCATAGAAGAGTTCAATTACCCCTTGCCGGACAAA TGTTCGGGTGGAAATACTTGTGTTTTTGTAAATGGCAGGGAACTTCATGAAAAGGATTTAGACTTGCTTGCTTTGAGAGGACTTCCCACTGAAAAAGATA GATCTTATATCATCGAAATTTCCGGTAGAGTCCTGGATGAAGACACGGCAGAAGAGCTAAACAGCCTTGGAAAACTTGCGCCAACAGTGCAGAAAGTGAA GCATGGATTTGGCATGAAAGCACATAGAGCTGGTCCATAATTAATCATGGAACAAGTCTAGAAATTTTTGCAACATTACTTGGAAATTCTTCTATTATAA AGTTTAAGTGTGTCTCATTGCATGACCTGAATTTAGATTACATATGTAATGCTTAAATTTATTTCTTATGTTAAAAAAACTGCATTAGAAGTTCTATGTT TGATGATATTAAGGGTCGGGTTTTCTACGATCAAATTTTGATATTTATTAAAAAAATCGGGCAGTAGGAAACAAAATTAAAATTATATTATTTTTTATTA TGTGTCAAAATGTGATTGGATGAGATAGAGTTGGGTACTTTGGGAATCCCAATGATTAGTTTAATCGATACAAATTGTGACCTAGGGAGGTAGGGCTAAG CGGAGCGAAAAGGGTTTCTTGTGAGATGGGAAATGAAAACTATTAGCCCCACACGGGATTTGTCAATAAGTGATTGTCTGATAATGAGGAAGGAA BLAST |
| Tissue | flowers |
| Gene name | LI_gene_71456; |
| Additional information | details; |
| FPAB | abscising flower pedicels |
| FPNAB | non-abscising flower pedicels |
| LF1 | lower flowers stage 1 |
| LF2 | lower flowers stage 2 |
| LF3 | lower flowers stage 3 |
| LF4 | lower flowers stage 4 |
| UF1 | upper flowers stage 1 |
| UF2 | upper flowers stage 2 |
| UF3 | upper flowers stage 3 |
| UF4 | upper flowers stage 4 |
Annotations of Ll_transcript_214356
| Blastp | Extra-large guanine nucleotide-binding protein 1 from Arabidopsis with 38.71% of identity |
|---|---|
| Blastx | Protein Ycf2 from Barbarea with 83.78% of identity |
| Eggnog | Guanine nucleotide binding protein (G protein) alpha(ENOG410XNVQ) |
| Kegg | Link to kegg annotations (AT2G23460) |
| CantataDB | - |
| Mirbase | - |
| Ncbi protein | Link to NCBI protein (XP_019419139.1) |
| Pfam | Probable zinc-ribbon domain (PF11331.7) |
| Rfam | - |
| GO | Links to GO: General; Genes and gene products; Annotations; Ontology; |