Ll_transcript_56116

Id TrinityFTRINITY_DN57806_c1_g2_i4
Name TranscriptLl_transcript_56116
SequenceAAAATGCAGCAAATCATCATCAACCAACTGAACAAAAGTCTTAAAAGAGTGCAGCATCTTTCATTAACACACCTTGGTTCCTATTCATTCTCTAAACATG CTGGTCAAATAAAAGACCAGTTCATACACATAAAGCAAATACAGTGAGCATTCTCTTCTTCATTCAGCACCTTCAGAGTTCCGAGGCACAACTTTTTCAT ATGAGATAGGTTGACCCATGCTTGAAAGACAAATACCACCTTGAAGGCATGCAAATCCCTATCAAAATGGAATGAAAGAGAAATGAATAGAAAGCACAAT AAGGCTTGAAAGTTATTCCAGTTCTAATTTCAGCATACAGCGTTACAAGGATGAAAGAAGCTAAGCATGACATGAGTAAAGAACATGTCCACCCAGTATG AAAGACTGCAACATCAATAAAAAGCCTAGTGGAATTGATGCAAATTTACATCAATATAATTATCATACTTGTTGTATAATATGGGGAAACCCTGAGCGGA TGCAAGGTCAAGGGTGCAACTCTTCCTGCAAAGTTTTTTATAGAGTAATTACAGAACCTCAGAAAAAGTTAAACACTAAATACAAGCAAAACATATGGCT TCAGCAATTACACTGAGGCTACGAAATCCAGAAGGCAGAAGGGGGCATCATCAGCAAAGCAAAGGATACATCCATTGGTCAACACAAATGGTAAACTTAA GCTAGAAATTAAGCGGAGAAGAGGATCAAGGTCACTTTCGATTTGGGAGGGAAATTTGTAATAAAACCCCAAAAAATTCCTTACAACTTACAATCTAAAT CAACGGGACAAAATTTCAACATTCAACATCACCCAGATTTAATTTCTATTCTGTGAAGTAAGGAATATAACATGAGCACTACAGTGCAAAAAACTCCAAG ATCTGGTAGGCAGTCATTATTTTTCAAGGATTTGGCTTCACCTGTTTCAACCCGGAGAGGAAAATTTTCAAGTCCGGGCCAGGCAGCTCCAGTTTCTACT CCATGGCGTGAGAACTTTGGTGGTTCAGACCTTCCACCACCTCCTTTTTACACTTTGGAAGACAGATCAGACTTTTCTCCTGAATCCGGTATACCTGATT ACCAGGTATCCCCAGAGACTAAGTCAGACCCTAGATCTCCAATGCAATCTTCAAATACGGAATTTTCAACTCCACTGAAAAACAAATCAGAGGCCAGCAC ATCTTATGCTTTACGTGGAGTGCAGCAAAACCATCAGGACTCACCAGGTTTGAATTGGTGGTCACCTGTACCTGCAAAGAGTGGCAGCGAGCAAGATGAC AAGGCGACGAGTTCACCAGTTGAGGGTGTAATACAGCCTGGTGCTCTGATTACTCTTCCGCCACCACTGGAAGTGGCAAGGCCTGAGGTCAAAAGAAATT CCTTCCCAGCAGGGAATCTCATTGAGGAAGAATGGGTAACAGTTTATGGGTAATGCCTTAACTCCAATTAACATTTAAGTTTCATCTATTGCTTAGGAAC AAACATAATCCTTCTCTACTATAAATATAACTATAGACACCTACCTTTGAAGTTCAGCACATTTTGCAGAAGAGAAATACATTGTTAAGTTGGAATAAAA TAACATAAATTTTAAGTCCTTGCTCCTAAATAATCAATAAGTTGCTCCAAACACTTCAGGTCAAAACTCATGCTTCCTTGACATGCCTTTTCTGAATGTA ACATTTCATTAGTATTACTTTTTTTATTGTGTATCACTGTCCAACCTAGGGACTTCATTTTAGGAGGAGTGGCTTTGGGCTCCTAGCTGGATAGTTTTGA GAATTGTTAGTGATAAATGAAAAATTATGGACAAAACTATTTTCTTTGGCAAATGTGTAGGAACCAGGAACTTTTTTCTGGATATATTATGGACAAAACT ATTTACAGTTGTCTTTGGAGGTTTCAAACAGATTGCCATGCATATATGCTTATTTTCAAGAAGTGCCCCAGGCAAAATGAGTTTTCTGATAAATGACAAT AACATATCAACGATACCTAATATATCACTTGAAGAAAAGTTGGGGATGACAATTAAGATGGGAAACACGGCAAGTTCATGGACTGATATGAACTGTTTTA GTTTAAAACTGTACATAAAGAAGAATTTCAGTGTTGGATGATGTGTTTCATTGTTAACTATATTTGGATTTGGGTGATTGTCGAGTTTCCATGAGTTGTT TTTGGGCAATGTGGTTGTTTTTCGATTATCAATCTTTTAGTGTGTTAAGAGAGGGGGAGAGAGAGATACTATTTGGTGTAGCCATATGACCCACACAATA CTTGAAAATATAAATGTGCTGTTAGCTATACTCCCTATCTGATGATCAGTGAGTAATATGATGTATATGTTGAAGCTTTGAGTATGCACTTGAATATCTT TGATGAGTCCTATTGAATTTTTTGCATCTGTTTTGAGATGCCAAACCAATAAGCTAAAGACATCTACTTTCAATATTGTATATACCAATATAAATGCTTG TAATAATGCTCTTTCTGTTTCTGTGCAGATTTTCTCCATATGATACTAATTTGGTTTTGAGGGAATTTGAAAAATGTGGTGAAATTTTGAAACATGTTCC TGGACCTAGAGATGCTAACTGGATCCACATTTTGTACCAGAATCGATCTGATGCCCAAAAAGCTCTTAACAAGAATGGAATGCAAATTAATGGAGTCCTA ATAGTAGGTGTTAAGCCTTTAGATCCCATGCAACGCCAATCTTTGAATGAAAGGCAGAACAATCAGGAATTTATGCCTTTGCCTCTATCCTCTGCTAGAA TTTCAGAAACAAGCACACTGAGAGCTTCTTCTCGACCCTATTATCTTCAGAATGGTAACTCAGCTGTTCGCCAGGCAGGAGGTACCATTGCTTCTCCAAC AAAATCATTGGTGTCCAAGGTCATGGATTTGATGTTTGGAGTCTAGATTTAGCTGCTATGGTGAATCAGCCTATTTCATTCTGTTCTGTTGTAAGCAATG GTTTTACTTTCTGCTACTATTCATGCACAATGCAGAGTTCAGACATATCTTTATAGGATTTGAGTTGTGGAACATTTGCTCTTTGGATCTCAGTTTTTGG AATTTATGGCATTTACTATTTGCAGTTTTATATGGGAATTCTTGGTACCCATATGTACTAAGTAGTTATAGGGAGTGTAGTTCATTACCCTAAACCTTGT TTCATTTTCACAATTATAATGCTTAACATCAAATCAAATGGGCGTATAACTACTTATTGAATATGCACATAAGGTAAACCACTGAACTGAAGTAGCGCCA TAATGTAATTATCAACACGTTCAGCACATAAATAATATAATATGGCCG BLAST
Tissueflowers
Gene nameLI_gene_71811; 
Additional informationdetails; 

Expression of Ll_transcript_56116

Labels

FPAB abscising flower pedicels
FPNAB    non-abscising flower pedicels
LF1 lower flowers stage 1
LF2 lower flowers stage 2
LF3 lower flowers stage 3
LF4 lower flowers stage 4
UF1 upper flowers stage 1
UF2 upper flowers stage 2
UF3 upper flowers stage 3
UF4 upper flowers stage 4

Annotations of Ll_transcript_56116

BlastpNuclear pore complex protein NUP35 from Arabidopsis with 68.39% of identity
BlastxNuclear pore complex protein NUP35 from Arabidopsis with 68.39% of identity
Eggnognucleoporin(ENOG4111ARE)
KeggLink to kegg annotations (AT3G16310)
CantataDB-
Mirbase-
Ncbi proteinLink to NCBI protein (XP_019458803.1)
Pfam-
Rfam-
GOLinks to GO: General; Genes and gene products; Annotations; Ontology;