Ll_transcript_58458

• Id Trinity: FTRINITY_DN57815_c1_g1_i4
• Name Transcript: Ll_transcript_58458
• Sequence: CTCACACAAGTGCTAGAGCCTTATCCCCTAGCCGCTTCTTTCTCTCTGAGGTTTTTGCTCTTTAAACCTCTTCTTCACCAAAATGGCTTCTTCAATCATA GGCGTTTCTTCCATTTACCAAACCCCTTCTCTTCAACGACAACAACAAAGAAACCCTTCCGTTTCATTGAAACCATTGTCGTTTCACAACAACATCAACA ACGATAACTCCCACTTCAACACTCTTCTCAGAGCTCACCTTTATAATCGCAGAATTTCTGCCATTGCTACCAACAATTCTTCCTTACTCGCTGAAGAAGC GCTTCATGGATTAGGCTTTGATGATGTCACTGATGATAACGATGATTTTGATAGTTTTGATTTTGAGAATGAAAATGAAAACCCTCCTGCGACTATTAGC ACCGATGAGCTTGATGTTTCTAAGCTGGATTTGCCTTCGCGACTCGTGGAATCGCTTAAGAAACGTGGAATCACTCACCTTTTCCCTATTCAGAGAGCTG TGCTAGTCCCTGCACTAGAAGGTAGAGATATCATTGCTCGGGCAAAGACAGGGACTGGCAAGACATTAGCATTTGGAATTCCAATTCTTAAAGGCCTCAC TGATGATGACCAGAATCCTATAAGGCGTGGTCGTCTTCCTAAAGCATTGGTCCTTGCGCCTACTAGGGAGTTAGCAAAACAAGTAGAGAAAGAGATCAAT GAATCTGCACCTTATCTGCACACAGTTTGTGTTTATGGTGGTGTTTCCTATGTAACTCAGCAAAGTGCACTTTCGCGTGGTGTTGATGTAGTAGTTGGAA CACCTGGTAGAATAATTGACCTGATAAATGGTAACACCCTTAAACTGAGTGAAGTTCAGTATTTGGTCCTCGACGAAGCTGATCAAATGCTTGCTGTTGG GTTTGAGGAGGATGTGGAAGTGATTTTAGAAAAGCTACCATCGAAGAGGCAGAGCATGCTTTTTTCCGCAACAATGCCAGCGTGGGTGAAGAAATTGGCT AGAAAATATTTGGATAAACCATTGACAATTGATTTGGTTGGTGATGAAGAAGAAAAGCTAGCTGAAGGGATCAAGCTTTATGCTATGTCAGCCACCTCTA CTTCAAAGAGGACAGTTCTTTCTGATCTTGTAACCGTTTATGCAAAGGGTGGGAAGACTATTGTTTTCACGCAGACAAAAAAAGATGCTGATGAAGTATC ATTGTCCTTAACAAATATTATATCTTCTGAAGCACTGCATGGTGATATATCTCAGCATCAGAGAGAGAGAACATTGAATGGTTTTCGGCAAGGGAAATTT ACAGTGCTTGTTGCCACTGATGTTGCTTCTCGTGGACTTGATATTCCCAATGTTGATTTGGTTATCCATTATGAACTTCCAAATGACCCTGAGACTTTTG TACACCGCTCTGGGCGTACAGGGCGTGCAGGAAAACTAGGTACTGCCATTCTGATGTACACCAGTAGCCAGAGGAGAACAGTTAGATCCCTTGAGCGTGA TGTAGGCTGCAAATTTGAATTTATTAGTCCACCAGCAATTGGAGAGATTTTGGAGTCATCTGCCGATCAAGTTGTTGCTACACTTAAACTTGTTCATCCC GAGTCAATTGAGTTCTTCACCCCAACTGCAGAAAAACTGTTTGAAGAACAAGGCACAAGTGCCCTTGCAGCTGCACTAGCACAGCTGAGTGGATTCTCTC GACCTCCATCATCCCGGTCTCTTATCAACCATGAACAGGGATGGGTAACATTACAACTGACTCGAGATGGCGATAACTCTAGAAGATTTCTTTCTGCAAG ATCAGTAACTGGGTTTCTTTCTGATGTTTATTCTCCAGCTGCTGATGAAGTTGGAAAAATACACTTAATTGCAGATGAAAAGGTTCAAGGAGCAGTTTTT GATCTTCCGGAGGAGATTGCTAAAGAGTTACTTGCTAAGGTGATACCACCAGGAAACACTATTACAAAGATCACCAAGTTGCCTCCTTTGCAAGATGATG GACCTGCAAGTGATTTCTATGGGAGGTTTTCCGACGACAGAGAACAAAGAAGTTCTAGAAATTCAAGAGGAGGTTTTAAGAGCTCACAGTCATGGGGAGG TGGACGAAACTCTGACGATGACTTTGGTAATTCATACGGTAGAGGCGGCGGTAGAGGTTATAGATCTAGCAACAACAACAGGTCTCAAACGAGGAGAAGC AGTGGTGATGACTGGCTGATTGGAGGTAGAGGTTCAAGCAGATCTTCATCATCAAACAGAAGTAGCTATGGAGGAGGAAACTATGGAGGAGGGGCCTGTT ATAATTGTGGACAAACTGGGCATAAGGCATCAGAATGTAAGAACAGAGACTTTTTTTAGTTAGCACATCTTAAAATTTAATGCTACCTTGTCCATAACTT GAGCTGCTGCCACTGGTGATGATGGTCTAGTAGGTTCTAGAATTTGAAATATGTTTCTCTAGGGAATTACAGAATCAATGTTATTTAATTTGAAGCTCTT GGGGTTTTGGCTTTAGATGTATTACAGTCTATACCGCTGATGTAAAATTTAAAACTTGTATTGTGGCTGTGATATTTAGCAAGAACAGTAACTCTGATCC TGTTTGTCTATTAAACGGTCTTGTTTATGATCCTGATTAGCCTTCACATGGTTTAAAAAGGACAGGAATAGCTTTATATGCAGAATTTGTTCCCAGCTGT TGTTCATAATATTATATTCTTTATAAACTAGTTGGTCTTTGTTTATTATTTTCCATCAATTTAGCTTGCAACATTGTAATTAGTTTGCTGGCTGAAAAAA ATTAGACATTTCATCTTAGAAACCAAGGTTGTTTTATGTTATTTGATGAACAATAATTTCTATGCATATTATGGATGTGTACTTCCTTGGAAAAAAA
• Tissue: flowers
• Gene name: LI_gene_71868;
• Additional information: details;

Expression of Ll_transcript_58458

FPKM

• FPAB: 9.3
• FPNAB: 20.4
• LF1: 27
• LF2: 27.7
• LF3: 21
• LF4: 24.9
• UF1: 24.2
• UF2: 30.1
• UF3: 23.3
• UF4: 21.1

Labels

• FPAB: abscising flower pedicels
• FPNAB   : non-abscising flower pedicels
• LF1: lower flowers stage 1
• LF2: lower flowers stage 2
• LF3: lower flowers stage 3
• LF4: lower flowers stage 4
• UF1: upper flowers stage 1
• UF2: upper flowers stage 2
• UF3: upper flowers stage 3
• UF4: upper flowers stage 4

Annotations of Ll_transcript_58458

• Blastp: DEAD-box ATP-dependent RNA helicase 3, chloroplastic from Arabidopsis with 73% of identity
• Blastx: DEAD-box ATP-dependent RNA helicase 3, chloroplastic from Oryza sativa with 80% of identity
• Eggnog: purine NTP-dependent helicase activity(COG0513)
• Kegg: Link to kegg annotations (AT5G26742)
• CantataDB: -
• Mirbase: -
• Ncbi protein: Link to NCBI protein (XP_019452324.1)
• Pfam: DEAD/DEAH box helicase (PF00270.28)
• Rfam: -
• GO: Links to GO: General; Genes and gene products; Annotations; Ontology;
  Links to GO: General; Genes and gene products; Annotations; Ontology;