Ll_transcript_56215

• Id Trinity: FTRINITY_DN57823_c1_g1_i1
• Name Transcript: Ll_transcript_56215
• Sequence: TGTTATCGTCAAGAATCAGGATTTCATCGAGGCTACCCGAGAAGGAAGTCTTTCCTTTTTGGCAGGGAAGTTTGACGGAATACTCGGGCTTGGCTTTCAG GAGATCTCAGTTGAAGATGCTGTACCACTATGGTACAATCTTGTAGAACAAAATCTCGTAAGTAAGAAGGTGTTCTCTTTTTGGCTCAACGCGGATCCAA ATGCGAAGAAGGGTGGTGAACTAGTATTCGGCGGTGTTGACTCAAAGCACTTCAAAGGAGAACACACTTATGCTCCAGTTACAAGAAGAGGTTACTGGCA GATTGAAATGGGAGATTTTCTCATTGGAGGTCTTTCAACAGGTGTTTGCGGGGGTGGCTGTGCTGTTATTGTGGACTCCGGAACATCTTTGCTTGCTGGC CCAACTGTATGTTCTTCAATCTTTTACGGGGGAAATTTCTTATTGATTATTTGCTTTGAGGTTAAGGAAGACCATCAACAACTCTAAGCGAAAAATATTA GAAAGGGTTTAGATCCAATCATCCAAATGGTCTCTTGGAAGATTTGCTTTTTGGCAGAACACGACTTTGTCGTTTGATCTATATAATCGACCTGACCTAG TGTGAAAAAGCCTTTGGTTATTATAGATTTTCATCAATGATCTTTGTTGATTCTCAATTAATTTCAGCCTGTTGTTGCTGAAATCAACCATGCTATTGGA GCCGAGGGAGTTCTCAGCGTAGAATGTAAGGATGTCGTTTCTCAATACGGAGAGTTGATATGGGATCTCTTAGTATCAGGGGTGAAACCTGCCGACGTAT GTTCGCAAGCTGGATTATGCGCTTTCAAGAAGGACCTATCTGAGAGCGCTGGAATTGAGATGGTAACCGAAAAGGAGACAGAGTCGAAAACTAGAGGAGA TACTCCTTTGTGTTCATCTTGTCAAATGCTTGTGATTTGGATCCAGAATCAACTAAGGCAAAAGAACACTAAGGAAAGAGTGTTCAGCTATGTGAACCAA CTATGTGAGAGCCTGCCAAGTCCGGCTGGAGAGTCGGTGATAAGCTGCGATAGTCTTTCTCGGATGCCAAACATTACGTTCACTATCGGAGATAAACCTT TTGTCCTTACACCAGACCAGTATATTCTGAGAACTGGAGAAGGCATCGCAGAAGTTTGCCTTAGTGGGTTTATTGCTCTTGATGTTCCTGCTCCACGAGG CCCACTCTGGATTCTTGGTGATGTTTTCATGAGGGTATATCACACAGTGTTTGATTATGAGAATGCCCAAGTTGGTTTTGCCATAGCTGCCTAAACTCAC TTCCAAAGAAGACTCTGTATTTTAATAAGTGTTGTGTAAAGAAGCTGTTATTATAAGCTATAAATACTAATACTCAGGTTCAGTCTGTGTATTCATAAAT GTATTTACTTATGCATTTGAAAGTATAGACTTGGAAGTGTTGCATGTGTTTACATTGAAGACCCATGTTTATAATCTTCTTTGTAAACCAGTATTTATAC CTTTCTTTTCCTATTATAATTTTACTATATACTTTAAATGTGGTATACTAATGTGGGTGGCAATAGAATGCATGAACTTCATCCACTTAACTTCTATAGT CCACCAGGCTTTAACATGTGGTCACTTTATGTACAATATAGTTACTGAAGTGAGAACATTTCTCATATAAGGTAGTTATTGATCACATAGTAATCATGTA TATATATCTTTTAATCTTAACCATTCTATCGAGATCCAATAGTTCATATCTGTTCTCATTTCATATTATAGTGTATTGTTCTTATGTAAGTAATATATAA ACACATTGTTCTTAGGTGGTGCCCTGTATATTTGTATATGTATAAACATAATATAGATATACTCACTAAAGTTTGGGATCCTTAC
• Tissue: flowers
• Gene name: LI_gene_71921;
• Additional information: details;

Expression of Ll_transcript_56215

FPKM

• FPAB: 1.3
• FPNAB: 0.5
• LF1: 1.1
• LF2: 0.7
• LF3: 1.2
• LF4: 0.7
• UF1: 0.7
• UF2: 0.7
• UF3: 1.7
• UF4: 0.9

Labels

• FPAB: abscising flower pedicels
• FPNAB   : non-abscising flower pedicels
• LF1: lower flowers stage 1
• LF2: lower flowers stage 2
• LF3: lower flowers stage 3
• LF4: lower flowers stage 4
• UF1: upper flowers stage 1
• UF2: upper flowers stage 2
• UF3: upper flowers stage 3
• UF4: upper flowers stage 4

Annotations of Ll_transcript_56215

• Blastp: Aspartic proteinase A2 from Arabidopsis with 64.71% of identity
• Blastx: Aspartic proteinase from Oryza sativa with 56.52% of identity
• Eggnog: aspartic(ENOG410XNV7)
• Kegg: Link to kegg annotations (AT1G62290)
• CantataDB: -
• Mirbase: -
• Ncbi protein: Link to NCBI protein (XP_019419261.1)
• Pfam: Eukaryotic aspartyl protease (PF00026.22)
• Rfam: -
• GO: Links to GO: General; Genes and gene products; Annotations; Ontology;