| Id Trinity | FTRINITY_DN57827_c2_g2_i16 |
|---|---|
| Name Transcript | Ll_transcript_56501 |
| Sequence | ATTCACCAAACTCCCAGAAATGCTTACTTTAACCTGCATCACTGCAGATTAGTTTCTTGGGTTTTTCACTGAGAATTGAAATCCTCTTCAAACAGGAATC TCAAGAAGGAAACATGTTTAATGAATTTGAAATGGATGAGAGGCCGATGCTGTCAGAAACACATGGACAACCATCTGATGCACCAGAAGATTCTAAATTC CAGAGGGTTGTATACAGGACACGGAGTGCATCAATGCCTAATACTATAGTCTGCATGGAGCAACATGAGAGAGAAACTAGTCTTCTGGGACATACTGGTC CACCATGGAGTGAGAGAAAAACCGATTTTGTGCAAATGAGTGCTCCACTATGTCATACCCGTGGAACCCAAAATCTTTTGCCCCAGAGTACAATAGTGAC ACTAAATAAAGAAGCAAATAACAACAGTGAAAATAAAAATGAACACTTATTGAAGTCCGGGCGGTTGGGAGTGTGTAATGATCCTTATTGTACTACTTGC CCTATGCTTGATCCTCTCTTCCTAGAATAGGCTATACTATTTCTCTTTTTATTTTAAGAAAACATTAATATGATTTTGAAGATAACTTTAATTAAGTAGT GCATGGTCAAATATTTTATTATAGATATATGTTGTTTTATACTATTCTAACGTGGTTCTTAAGTAGCCTAATTTTTTTCAAGTTTATCAATTCTTGTACC ATAGACTTTTTCATTTATATAGTTGAGGCTTTTTTGCGCTTCTACATCATAGTAATTAATGATATTAATACATTTATGTTAGCCATCAAGATTTTGAACA TTTGATAAGAAGAAATTTGTTTCAATTGCTATTCACTTCAATTATATTCATGAGAAGAAATTGGAGTTTAGTGTCCTAAAGCCTGATTTAGCCCAAGCAT ACTTGTATTCATAACTTGACTATTTATACAGTTCGACAATCCTCTTTCTGGAGATGCCAAGGGTTTTGGGAGAAAATTTTATTCCTTTAGCTCCATGCAT GTTCGTGGAATCATGAACCCTCATGCGAAAGTTGTACAACAATGGAACAAAGTTCTGGGTATTTTTTGCTTGTTGGCGATTTTTCTAGATCCATTATTTG TCTTCTTATTGCATGTGCAGGAGGAAAACAAATGTATTGTTATCAACTGGACAATGACACAAATATTTGTTGTGCTGAGAAGCATAAATGATTTGATATA TTTAATGAACATTCTTCTCCAGATAATTATGTTGTTTGTGATACCATATTACGTGGGTTCATCGGGAGCAAATTATGCCAAGAATATTTTGCGTGTATCA ATCCTGGTGCAGTATATTCCCAGATTATTCAGGTTTCTGCCTCTACTATTTGGCCAGTCACAAACGGGATTTATATTTGAGTCTGCCTGGGCAAATTTCA TCATAAATCTTCTCACTTTTATGCTATCTGGCCATATCGTTGGTTCTTGTTGGTATCTCTTTGGTCTTCAGCGTGTCAATCAATGTTTACGAGATGCCTG CCATAAAGCAAATATTCCCCAGTGCATGGAAATTATTGATTGTAAACAAGCCCCTCACGTGAATAACACAACAACCTTAGTTGAATGGCACAACAATACA GATGCCATTAGTTGTTTGGATTCATCACATACCGATGGCTTTCATTATGGGATCTATACCAATGCTGTACAAGTTACTATAGAAACTAGTGTTATCAACA AATATGTGTATTCTTTGTTTTGGGGATTCCAGGTATGTATTTCTTTTTTTTCTTTTTTGTTCCTTCATTAGTAATAATATCCAAACAAATCTCATTGATC CTTCCTATGAAAAAATTATTAATATTATTTAATTTACAACAAATCCTCCTATCATTGATCCTCATGGTTGATCTATCCTTCGGGGATGATTTATTGAAAA AGTACATATTCTCTTTATGTTGTATTATCGAATCATAATTTAACTAGAAGAATGGGATCACAAGGCTTGAGTTTCTCAGAACACTTTTTTTTTTTAAGCA ATGGTGCAAGCACCCGAATTTATTAAGGAAGAAGACAATAGAGAACAACCCTAGCCATTTTTAAACCTATAGCTAGGAAGAGAAGAAGCATTTCTATTAC ATTCATTAACAAGAAAAGAAGGAATAGAATGCCAAATAAAATTGGTTCTAGACTTTAAACCATGATTTGCAAGAAGATCAGCACATTGGTTTCCTTCACG AAAAATATGGGAGATTTTCAAGTTTATAGAAGCCATGTTAGCCTTGCAAATAGACCAAAGAGGAAGAAGCTGCCACGGAGGAGGGGAAGTAGCCATGAAG ATGTCAACAACCATAGTAGAATCACACTCAATCCAAAGATTGCGCCAATTTCTAGAAGTAGCCATTGAGACAGCCTGCATGGCTCCATGCAACTCGGCAT AAATGGCAGTTTTACCCACACTACTCTAACCAAAGTTGTCAAGGCCAAGTAGCCATTCAGAACACTTGGTCATTGATGGTGTGATCATGTCAAGGCCCAA GTTTTACCCACACTAACCAAAGTTGTAAAGTCAATGCACATGAATGGTTTAGTATCCCTTAACTACTCTACCTGTGTGGTCTTTAATACAGCAAATCAGT ACTCTGGCTGGCAATCTAACCCCGAGCAATTTTGTGTGGGAAGTCCTTTTTACAATGGCCATCATCGGATCAGGGTTGTTGCTTTTTGCGCTACTCATTG GAAACATACAGAACTTTCTTCAAGCTCTAGGACGAAGGAGGCTAGAGATGCAACTTAGAGGTTGTGATGTTGAACAATGGATGCATCATTGCCGCTTACC AGAAGATCTAAAAAGCGAAGTGCGACAGGCTGAAAGGTATAGTTGGGCTGCAACAAGGGGGGTGAATGAAGAAATGCTTCTTGAGAATTTGCCAGAAGAT CTCCAGAGAGACATAAGACACCATCTCTTCACATTTGTTGCAGAAATCGGAATTTTTAGGTCGATGGATGAACTTATCTTAGATGCCATCTATGAGAGAC TAAGACCAAAGACATACCTAAAAAAAGTACAATTTTGTGTCGGGGTGGTCCGATAGAGAATATTATCTTTATTGTGCGTGGAAAATTGGAAAGCATCCGA GAAAATGGAAATAGAGTTCACTTATCAGAAGGAAATGCTTGCGGTGAAGAACTTCTGACTTGGTATCTTGAACATTCTTCAGTAAGCAAAGATGCTAAAA AAGTACAACTTTCGGGACCTGGATTGATTAGTGACAGGAATGTGAAGTGCTTAACAAATGTCCAAGCATTTTCACTTCGAGTTGCTGACCTTGAAGAAGT CACAATCCTTTTCAAAAGATTCTTGCAAAGTACAAGTGTCTAAGGAGCTTTAAGGTCATTCCTTTGCCTTGTTACATCTAGATTTAAGGTTCAGCATAGT CTTTTTTACCATTATGACTAACTAAAATCCAAATCAACTCTAGAGTAGCATTTGGTGTGTGGAGATAACTAGATAGAATATGATGAATCGAGATATTATA TTATCTTTGATTCCAACGTAGTTAAAATGATTTACTTTTTTGGTCTTTTATCCCGACTCGTTTATAAAATATACCAAACACACAACAAAAACTAATATGT TTTGTTATGTCTTGTTCTAACATATCCATCAAACACTAAGACATGAAAAATGTTATTTCATTATCATGTGTCCCATTTGTCTGTAGTAGCTTAGATTCCG ATGCTTCATTTTCATTAAGACTAGTTAGTCCTTAACTATCACACTTAAGAATACATGGAAATGAATGGTTCATATGTGACCCAACATCTTTGATTCAATT CCTTTTTTCACCTCTTTAAAAAAATGCCCAACTTATGTTTTAAAATTTGTTGCT BLAST |
| Tissue | flowers |
| Gene name | LI_gene_71956; |
| Additional information | details; |
| FPAB | abscising flower pedicels |
| FPNAB | non-abscising flower pedicels |
| LF1 | lower flowers stage 1 |
| LF2 | lower flowers stage 2 |
| LF3 | lower flowers stage 3 |
| LF4 | lower flowers stage 4 |
| UF1 | upper flowers stage 1 |
| UF2 | upper flowers stage 2 |
| UF3 | upper flowers stage 3 |
| UF4 | upper flowers stage 4 |
Annotations of Ll_transcript_56501
| Blastp | - |
|---|---|
| Blastx | Putative cyclic nucleotide-gated ion channel 19 from Arabidopsis with 66.67% of identity |
| Eggnog | - |
| Kegg | - |
| CantataDB | - |
| Mirbase | - |
| Ncbi protein | Link to NCBI protein (XP_017439664.1) |
| Pfam | Reverse transcriptase-like (PF13456.5) |
| Rfam | - |
| GO | - |