| Id Trinity | FTRINITY_DN57827_c2_g2_i17 |
|---|---|
| Name Transcript | Ll_transcript_56503 |
| Sequence | ATTCACCAAACTCCCAGAAATGCTTACTTTAACCTGCATCACTGCAGATTAGTTTCTTGGGTTTTTCACTGAGAATTGAAATCCTCTTCAAACAGGAATC TCAAGAAGGAAACATGTTTAATGAATTTGAAATGGATGAGAGGCCGATGCTGTCAGAAACACATGGACAACCATCTGATGCACCAGAAGATTCTAAATTC CAGAGGGTTGTATACAGGACACGGAGTGCATCAATGCCTAATACTATAGTCTGCATGGAGCAACATGAGAGAGAAACTAGTCTTCTGGGACATACTGGTC CACCATGGAGTGAGAGAAAAACCGATTTTGTGCAAATGAGTGCTCCACTATGTCATACCCGTGGAACCCAAAATCTTTTGCCCCAGAGTACAATAGTGAC ACTAAATAAAGAAGCAAATAACAACAGTGAAAATAAAAATGAACACTTATTGAAGTCCGGGCGGTTGGGAGTGTGTAATGATCCTTATTGTACTACTTGC CCTATGCTTGATCCTCTCTTCCTAGAATAGGCTATACTATTTCTCTTTTTATTTTAAGAAAACATTAATATGATTTTGAAGATAACTTTAATTAAGTAGT GCATGGTCAAATATTTTATTATAGATATATGTTGTTTTATACTATTCTAACGTGGTTCTTAAGTAGCCTAATTTTTTTCAAGTTTATCAATTCTTGTACC ATAGACTTTTTCATTTATATAGTTGAGGCTTTTTTGCGCTTCTACATCATAGTAATTAATGATATTAATACATTTATGTTAGCCATCAAGATTTTGAACA TTTGATAAGAAGAAATTTGTTTCAATTGCTATTCACTTCAATTATATTCATGAGAAGAAATTGGAGTTTAGTGTCCTAAAGCCTGATTTAGCCCAAGCAT ACTTGTATTCATAACTTGACTATTTATACAGTTCGACAATCCTCTTTCTGGAGATGCCAAGGGTTTTGGGAGAAAATTTTATTCCTTTAGCTCCATGCAT GTTCGTGGAATCATGAACCCTCATGCGAAAGTTGTACAACAATGGAACAAAGTTCTGGGTATTTTTTGCTTGTTGGCGATTTTTCTAGATCCATTATTTG TCTTCTTATTGCATGTGCAGGAGGAAAACAAATGTATTGTTATCAACTGGACAATGACACAAATATTTGTTGTGCTGAGAAGCATAAATGATTTGATATA TTTAATGAACATTCTTCTCCAGATAATTATGTTGTTTGTGATACCATATTACGTGGGTTCATCGGGAGCAAATTATGCCAAGAATATTTTGCGTGTATCA ATCCTGGTGCAGTATATTCCCAGATTATTCAGGTTTCTGCCTCTACTATTTGGCCAGTCACAAACGGGATTTATATTTGAGTCTGCCTGGGCAAATTTCA TCATAAATCTTCTCACTTTTATGCTATCTGGCCATATCGTTGGTTCTTGTTGGTATCTCTTTGGTCTTCAGCGTGTCAATCAATGTTTACGAGATGCCTG CCATAAAGCAAATATTCCCCAGTGCATGGAAATTATTGATTGTAAACAAGCCCCTCACGTGAATAACACAACAACCTTAGTTGAATGGCACAACAATACA GATGCCATTAGTTGTTTGGATTCATCACATACCGATGGCTTTCATTATGGGATCTATACCAATGCTGTACAAGTTACTATAGAAACTAGTGTTATCAACA AATATGTGTATTCTTTGTTTTGGGGATTCCAGCAAATCAGTACTCTGGCTGGCAATCTAACCCCGAGCAATTTTGTGTGGGAAGTCCTTTTTACAATGGC CATCATCGGATCAGGGTTGTTGCTTTTTGCGCTACTCATTGGAAACATACAGAACTTTCTTCAAGCTCTAGGACGAAGGAGGCTAGAGATGCAACTTAGA GGTTGTGATGTTGAACAATGGATGCATCATTGCCGCTTACCAGAAGATCTAAAAAGCGAAGTGCGACAGGCTGAAAGGTATAGTTGGGCTGCAACAAGGG GGGTGAATGAAGAAATGCTTCT BLAST |
| Tissue | flowers |
| Gene name | LI_gene_71956; |
| Additional information | details; |
| FPAB | abscising flower pedicels |
| FPNAB | non-abscising flower pedicels |
| LF1 | lower flowers stage 1 |
| LF2 | lower flowers stage 2 |
| LF3 | lower flowers stage 3 |
| LF4 | lower flowers stage 4 |
| UF1 | upper flowers stage 1 |
| UF2 | upper flowers stage 2 |
| UF3 | upper flowers stage 3 |
| UF4 | upper flowers stage 4 |
Annotations of Ll_transcript_56503
| Blastp | Probable cyclic nucleotide-gated ion channel 20, chloroplastic from Arabidopsis with 55.53% of identity |
|---|---|
| Blastx | Probable cyclic nucleotide-gated ion channel 20, chloroplastic from Arabidopsis with 54.99% of identity |
| Eggnog | Potassium voltage-gated channel, subfamily H (Eag-related), member(ENOG410XPSE) |
| Kegg | Link to kegg annotations (AT3G17700) |
| CantataDB | - |
| Mirbase | - |
| Ncbi protein | Link to NCBI protein (XP_017439664.1) |
| Pfam | Ion transport protein (PF00520.30) |
| Rfam | - |
| GO | Links to GO: General; Genes and gene products; Annotations; Ontology; Links to GO: General; Genes and gene products; Annotations; Ontology; |