Id Trinity | FTRINITY_DN57827_c2_g2_i7 |
---|---|
Name Transcript | Ll_transcript_56490 |
Sequence | ATTCACCAAACTCCCAGAAATGCTTACTTTAACCTGCATCACTGCAGATTAGTTTCTTGGGTTTTTCACTGAGAATTGAAATCCTCTTCAAACAGGAATC TCAAGAAGGAAACATGTTTAATGAATTTGAAATGGATGAGAGGCCGATGCTGTCAGAAACACATGGACAACCATCTGATGCACCAGAAGATTCTAAATTC CAGAGGGTTGTATACAGGACACGGAGTGCATCAATGCCTAATACTATAGTCTGCATGGAGCAACATGAGAGAGAAACTAGTCTTCTGGGACATACTGGTC CACCATGGAGTGAGAGAAAAACCGATTTTGTGCAAATGAGTGCTCCACTATGTCATACCCGTGGAACCCAAAATCTTTTGCCCCAGAGTACAATAGTGAC ACTAAATAAAGAAGCAAATAACAACAGTGAAAATAAAAATGAACACTTATTGAAGTCCGGGCGGTTGGGAGTGTGTAATGATCCTTATTGTACTACTTGC CCTATGCTTGATCCTCTCTTCCTAGAATAGGCTATACTATTTCTCTTTTTATTTTAAGAAAACATTAATATGATTTTGAAGATAACTTTAATTAAGTAGT GCATGGTCAAATATTTTATTATAGATATATGTTGTTTTATACTATTCTAACGTGGTTCTTAAGTAGCCTAATTTTTTTCAAGTTTATCAATTCTTGTACC ATAGACTTTTTCATTTATATAGTTGAGGCTTTTTTGCGCTTCTACATCATAGTAATTAATGATATTAATACATTTATGTTAGCCATCAAGATTTTGAACA TTTGATAAGAAGAAATTTGTTTCAATTGCTATTCACTTCAATTATATTCATGAGAAGAAATTGGAGTTTAGTGTCCTAAAGCCTGATTTAGCCCAAGCAT ACTTGTATTCATAACTTGACTATTTATACAGTTCGACAATCCTCTTTCTGGAGATGCCAAGGGTTTTGGGAGAAAATTTTATTCCTTTAGCTCCATGCAT GTTCGTGGAATCATGAACCCTCATGCGAAAGTTGTACAACAATGGAACAAAGTTCTGGGTATTTTTTGCTTGTTGGCGATTTTTCTAGATCCATTATTTG TCTTCTTATTGCATGTGCAGGAGGAAAACAAATGTATTGTTATCAACTGGACAATGACACAAATATTTGTTGTGCTGAGAAGCATAAATGATTTGATATA TTTAATGAACATTCTTCTCCAGATAATTATGTTGTTTGTGATACCATATTACGTGGGTTCATCGGGAGCAAATTATGCCAAGAATATTTTGCGTGTATCA ATCCTGGTGCAGTATATTCCCAGATTATTCAGGTTTCTGCCTCTACTATTTGGCCAGTCACAAACGGGATTTATATTTGAGTCTGCCTGGGCAAATTTCA TCATAAATCTTCTCACTTTTATGCTATCTGGCCATATCGTTGGTTCTTGTTGGTATCTCTTTGGTCTTCAGCGTGTCAATCAATGTTTACGAGATGCCTG CCATAAAGCAAATATTCCCCAGTGCATGGAAATTATTGATTGTAAACAAGCCCCTCACGTGAATAACACAACAACCTTAGTTGAATGGCACAACAATACA GATGCCATTAGTTGTTTGGATTCATCACATACCGATGGCTTTCATTATGGGATCTATACCAATGCTGTACAAGTTACTATAGAAACTAGTGTTATCAACA AATATGTGTATTCTTTGTTTTGGGGATTCCAGGTATGTATTTCTTTTTTTTCTTTTTTGTTCCTTCATTAGTAATAATATCCAAACAAATCTCATTGATC CTTCCTATGAAAAAATTATTAATATTATTTAATTTACAACAAATCCTCCTATCATTGATCCTCATGGTTGATCTATCCTTCGGGGATGATTTATTGAAAA AGTACATATTCTCTTTATGTTGTATTATCGAATCATAATTTAACTAGAAGAATGGGATCACAAGGCTTGAGTTTCTCAGAACACTTTTTTTTTTTAAGCA ATGGTGCAAGCACCCGAATTTATTAAGGAAGAAGACAATAGAGAACAACCCTAGCCATTTTTAAACCTATAGCTAGGAAGAGAAGAAGCATTTCTATTAC ATTCATTAACAAGAAAAGAAGGAATAGAATGCCAAATAAAATTGGTTCTAGACTTTAAACCATGATTTGCAAGAAGATCAGCACATTGGTTTCCTTCACG AAAAATATGGGAGATTTTCAAGTTTATAGAAGCCATGTTAGCCTTGCAAATAGACCAAAGAGGAAGAAGCTGCCACGGAGGAGGGGAAGTAGCCATGAAG ATGTCAACAACCATAGTAGAATCACACTCAATCCAAAGATTGCGCCAATTTCTAGAAGTAGCCATTGAGACAGCCTGCATGGCTCCATGCAACTCGGCAT AAATGGCAGTTTTACCCACACTACTCTAACCAAAGTTGTCAAGGCCAAGTAGCCATTCAGAACACTTGGTCATTGATGGTGTGATCATGTCAAGGCCCAA GTTTTACCCACACTAACCAAAGTTGTAAAGTCAATGCACATGAATGGTTTAGTATCCCTTAACTACTCTACCTGTGTGGTCTTTAATACAGCAAATCAGT ACTCTGGCTGGCAATCTAACCCCGAGCAATTTTGTGTGGGAAGTCCTTTTTACAATGGCCATCATCGGATCAGGGTTGTTGCTTTTTGCGCTACTCATTG GAAACATACAGAACTTTCTTCAAGCTCTAGGACGAAGGAGGCTAGAGATGCAACTTAGAGGTTGTGATGTTGAACAATGGATGCATCATTGCCGCTTACC AGAAGATCTAAAAAGCGAAGTGCGACAGGCTGAAAGGTATAGTTGGGCTGCAACAAGGGGGGTGAATGAAGAAATGCTTCTTGAGAATTTGCCAGAAGAT CTCCAGAGAGACATAAGACACCATCTCTTCACATTTGTTGCAGAAGTCGATGGATGAACTTATCTTAGATGCCATCTATGAGAGACTAAGACCAAAGACA TACCTAAAAAAAGTACAATTTTGTGTCGGGGTGGTCCGATAGAGAATATTATCTTTATTGTGCGTGGAAAATTGGAAAGCATCCGAGAAAATGGAAATAG AGTTCACTTATCAGAAGGAAATGCTTGCGGTGAAGAACTTCTGACTTGGTATCTTGAACATTCTTCAGTAAGCAAAGATGCTAAAAAAGTACAACTTTCG GGACCTGGATTGATTAGTGACAGGAATGTGAAGTGCTTAACAAATGTCCAAGCATTTTCACTTCGAGTTGCTGACCTTGAAGAAGTCACAATCCTTTTCA AAAGATTCTTGCAAAGTACAAGTGTCTAAGGAGCTTTAAGGTATGAATCACATTATAGGAGATCCCTTCCAACTACCTGAGTTCAGGTTGCATGGAGCTA TAGGAAGAAACGTCCAAGTCGTGTTAATACCTCACACTTAGATTAAACAATGAAGTCATAGGTTGTACTGTAATTTTGATTAGCTACACGTTGTCATAAT TGTATTGTAATAATATTTGAGTTTGTGACATATATATGTCATTTTTTCTTTTAATAATACTAATATTTCAAGTTTAAAAA BLAST |
Tissue | flowers |
Gene name | LI_gene_71956; |
Additional information | details; |
FPAB | abscising flower pedicels |
FPNAB | non-abscising flower pedicels |
LF1 | lower flowers stage 1 |
LF2 | lower flowers stage 2 |
LF3 | lower flowers stage 3 |
LF4 | lower flowers stage 4 |
UF1 | upper flowers stage 1 |
UF2 | upper flowers stage 2 |
UF3 | upper flowers stage 3 |
UF4 | upper flowers stage 4 |
Annotations of Ll_transcript_56490
Blastp | - |
---|---|
Blastx | Putative cyclic nucleotide-gated ion channel 19 from Arabidopsis with 57.09% of identity |
Eggnog | - |
Kegg | - |
CantataDB | - |
Mirbase | - |
Ncbi protein | Link to NCBI protein (XP_020203450.1) |
Pfam | Reverse transcriptase-like (PF13456.5) |
Rfam | - |
GO | - |