Ll_transcript_57258

Id TrinityFTRINITY_DN57843_c1_g3_i8
Name TranscriptLl_transcript_57258
SequenceCAAAAACAAAAAACTAAGGTATATGACAAATAGTTTTGAGGAACCAAAGAACAAAGCACATTTTCGTGTTTCAATTGTGAAAAGTGCAAAAGCAGGGAAA GGAGAATGTTGATTGTGACTTCGTGAGAACTAAGAAAGAAGCATAAACGGTAGTGCTTTGATTCTATTGGATTGTTGGGTAGTGATTCAGATTTTGAACG TGCGCAACACTATTGCATTACGTCTCAACAAGATCCATTTGAATCATAATCATTCTTCATCACAAACCCTTGAATCTAAAGAAAAAAGCAATTTTGAAAA ATTGGTTTTGTAATTCAAGCCATTTAAGACGTGGGTTTCGAAATTCAAGCCAGTTCGTTGATGGGTTTTTAAATTGAAGCCATTCCATTGATGGGTTTTT GAAGGAATCTGAAGAATTTTTTTTTCAATGTTGGAAAGCGATCAGAATCGTCTTCTGGGTTCGTCGGAAGATGCGGAGCACGACGTGGAAGCTCAAACAT CCGAAATCAATGGCGGAAGAGGGTTGAGGGATTTGCTTAGATTGAAAAGGTTAGAGAAAGAAGGAGAAATAAGAGATCGAAATAGTTATAATCATAATCA TAATTCACATTCGCATATGGATCTTCATGATGATGATGATTCTTCGCTTGGAGATAGTGCACCTCCTGAATGGGTATTGCTCCTTCTTGGTTGCCTCCTT GGCCTAGCCACTGGACTCTTTGTTGCTGCTTTCAATAAAGGGGTGCATCTAATACATGAATGGGCCTGGGCTGGTACTCCAAATGAGGGTGCTGCTTGGC TTCGTTTGCAAAGATTGGCTGATACATGGCATCGAATCCTTTTGATACCTGTCTTTGGAGGAGTCATTGTTGGCATGATGCATGGCTTACTAGAAATACT TGACCAAATAAAGCAGTCTAGTTCCTCTCAAAGGCAAGGTTTTGATTTGCTTTCGGGAGTCTATCCGACAATAAAGGCTATCCAGGCTGCAGTTACTTTA GGTACCGGCTGTTCTTTGGGTCCTGAAGGTCCTAGTGTTGATATTGGAAAGTCATGTGCCGCTGGATTCTCATTAATGATGGAAAACAACAGAGAAAGAA AAATAGCACTTGTTGCGGCTGGTGCAGCAGCTGGAATTTCTTCAGGCTTCAATGCAGCAGTTGCGGGTTGTTTCTTTGCTATTGAAACCGTGCTGAGGCC ACTTCGTGCAGAGAATTCTCCCCCATTTACAACCGCAATGATTATATTGGCTTCTGTTATCTCATCGACTGTATCAAATGTTTTACTGGGAACTGAATCA GCTTTTACAGTGCCTGCATATGATCTTAAATCTGCTGCTGAGCTACCTTTATATCTGATATTGGGAATGCTATGTGGTGTTGTAAGTGTGGCCATGAGTC GTTTGGTTGCTTGGTTCACCAAATTGTTTGAGGTTATCCAGGAGAGATTCGACCTTCCTGCTGTGGTATGCCCTGCTTTAGGTGGTTTAGGAGCTGGGAT CATTGCTCTTAAATATCCTGGAATATTGTATTGGGGTTTCACAAATGTGGAAGAAATTCTACATACCGGAAAGAGTGCTTCAGCTCCTGGAATATGGTTG TTGACACAATTAGCAGCTGCAAAGGTTATCGCGACAGCTCTTTGCAAGGGATCTGGACTTGTAGGTGGTCTTTATGCACCGAGTTTAATGATTGGTGCTG CAGTTGGTGCTGTATTTGGAGGGTTTGCAGCTGAAGTTATCAATTCGGCAATTCCTGGAAATGCTGCTGTTGCCCAACCCCAGGCATATGCTCTGGTTGG AATGGCTGCTACATTAGCATCTGTTTGTTCAGTTCCCTTGACGTCAGTTCTACTTCTGTTTGAGCTGACAAAAGATTACAGGATATTGCTTCCTCTCATG CATTTTGTAATATCCAGAACTTGTGAGCAGTGGTGTTTTAAGAACCCGAGAACAGGAGGTGCAAATTGCATTGAATTGTCCAAAATGTATCAGAATAGGA CAAATGGAGTGACATGGGTGCAATTATATATATCCGGGGGTGCAAACAATATTAACTATAAGGGCAATGTATAATTTTTTCCAGGGGGCTGTTGGATTGG CAATATGGGTTCCCTCAGTGACAAACCAGACGAAGGAGAGTGATACACCTGATACAAGAAACTCAGCAAGAGGATATTCTTCAATTTTGCGTGCTGAAGA TAATGAAGGTAACTGGAGAGAAGCCCACAACGGGGATGGTTTAGAACTCGGTGTTATTGAAGATGCTGCTAATCTTGAATTAGTTGATGAGGAACTGCTT CTGGAAAATCTTAAGGTTGGGAAAAGCTTTTTCGTATTTCCTTTTGATTAGTTACATCTTACCTCTTTTATTGTTACTGCAGCCGGACGTTGACTTGCAA TCTTGAATTTTATCTGTTAGCTTTTAACCTCATCATTGGCATTGTTCGTCTCTTTTGTTGTTACTGCAGCCGGATGTTGACTTGCAATTTTGAATTTTGT CTGAGCTTTTAACCTCATCATTGTCATTATCCGTCTCATTAGGTCTCTCAGGCCATGTCTAAGAACTATCTGAAGGTTTTATCATCTGTAACCCTGAAAG ATGCAATCAAATGCATTCGTGACAGCCAGCAGAATTGTGTGCTAGTGGTTGACGAGGAGGATTTTCTAGAAGGAATATTGACATACGGTGACATTAGAAG GTGTCTGCCCGAGAACTCTAGTGATACTTCCAAGAGTGGTTCAAGGCTTCTGGATGACACATGCCTTGTTTCTTCTGTTTGTACTCGAGGGATGAGCTAC CGCGGACGAGAGCGTGGACTTCTAACATGTTACCCAAATACTAGTTTGGCTATGGCCAAAGAGGTAATGGAGGCCAGGGGTATTAAGCAATTACCAGTGG TTAAACATGGTGTAGATCAAAGTCGAGAGCGGAAGCGAAGAGTCGTTGGTCTTCTTCATTATAACGCACTATGGATTTGTCTCAGGAAAGAGATTAATCA CAGGAAGTTAGCCTATCAAAATAGGACAGAAAAGAATGTGGCTGTGGTAACTATAAATGGACATTAACTCTGATCAAGAAGCTTCATGTGAAAAAAATTA GTAAAGCCAGGTTGTAGAAATTTGCACTTGTGAAGTTAAAAGTAGAGACTATGTAAGTTACATGTATATTTTTTAGTGCCACAAGTTGGGTTATATTTCA TAAGAAACTAAATATTTCCAACCCTCACGCGTTAAGGAATCAATCCATCCAAATCAACCTCATATTGAGTTTTAATATAAGGTTTACTACATGGATCGAA TGATGATTTTATCGTAAATCACGTTTGTTGACTTTACGAAGCAAATGACTAGTTGAATACAATGGGAGATAAAAATTGAGTTCAAACCAAAATTATATAT ACTCAACATGCCCATTTGGCTTCAAATTCATTGTAATTCTCTCCTATATCTTTCTTGAACTCTATTTGTCTATATGAATTGAATTATCT BLAST
Tissueflowers
Gene nameLI_gene_72077; 
Additional informationdetails; 

Expression of Ll_transcript_57258

Labels

FPAB abscising flower pedicels
FPNAB    non-abscising flower pedicels
LF1 lower flowers stage 1
LF2 lower flowers stage 2
LF3 lower flowers stage 3
LF4 lower flowers stage 4
UF1 upper flowers stage 1
UF2 upper flowers stage 2
UF3 upper flowers stage 3
UF4 upper flowers stage 4

Annotations of Ll_transcript_57258

BlastpChloride channel protein CLC-f from Arabidopsis with 75.47% of identity
BlastxChloride channel protein CLC-f from Arabidopsis with 89.47% of identity
Eggnogchloride channel(COG0038)
KeggLink to kegg annotations (AT1G55620)
CantataDB-
Mirbase-
Ncbi proteinLink to NCBI protein (XP_019421073.1)
PfamVoltage gated chloride channel (PF00654.19)
Rfam-
GOLinks to GO: General; Genes and gene products; Annotations; Ontology;
Links to GO: General; Genes and gene products; Annotations; Ontology;