| Id Trinity | FTRINITY_DN57921_c0_g1_i20 |
|---|---|
| Name Transcript | Ll_transcript_259935 |
| Sequence | AAATACTCTCTCTTGTCTCGTATTACCCCTTTCTATTTTCTCTCTCTCTTTTCCCAAATCGGAAAAGAAAAAAGAAAACGATTACTCCATTTTTCTCTGT TAAACCCTAATCCCAAATCATCGATCCCAATTCGTTTCTCTCTCTATATATAAACTTCGATCCCTCACTTTCTCATCCCTCAATCGATTCAAAACCCTTT CCGCGAGATCCATTCTCACCATTTCTTTCCGATTTCGGATTCTGGTGAGTCAATGCTGGCGGTTATTCGGGTCAAGTAAATGGCGGATCCGCCAGGTTTC AACCACTTATCAACGCGTGTTCTTGTTTTTCAAGTTGAAGAAAACGAGGATTGTTGTTATTGTAGAGTTGAGTGAGAATGGTTAGTGTGCTGCGTGTGCA CCTGCCTTCTGAAATTCCCATTGTAGGATGCGAGCTCACACCTTATGTTCTGCTCCGTCGCGCCGATAAGACCATTACTACGGATGATGTTCATGAAACT GCTCCCTTAGATGGGCAATTCTTGCGCTACAAGTGGTATCGTGTGCAGAGTGATAAAAAGGTTGCTGTCTGTAGCATACATCCATCTGAGCAGGCCACAT TGCAGTGCCTAGGTTGTGTTAAGGCCAGATTACCTGTTGCCAAAAGTTATCATTGCACACCAAAGTGTTTTTCAGATGCATGGCAGCATCACCGGGTCTT GCATGACCGTGCTGCAAGTGCAGCTAATGAAAATGGAAATGAGGATGAGGAGGTATTTGGGCGCTTTAATAGTTCTGGGTCTGGGGTAAGCAATTCCAGC TTGTCTGCATCTGCGTCAAGTGCTATCTTGGTGAATGGGTCTGAAGCACCTTATCCAGCAGCTATCACTCAAAAAAGTGGTGAAATTTGGTATGAAGTTG GACGTTGTAAGACTTACACTCCAACAGCTGATGATATTGGTCATGTCCTTAAGTTTGAGTGTGTTGTAGTTGATGCTGAGACAAAACTTCCAGTGGGGTA TGCTAACACTTTACTAACTTCTCGGGTCATTCCCGCTCCCTCGCCTAGCCCACGCCGCATGGTACCTGTTGACGGGATGGGGCAATTAGACGCAGATGGA CGCATAACATCTTCAGGAACTTTTACTGTCTTATCATACAACATATTGTCTGATGCATTTGCCTCAAATGATCTATACAATTACTGCCCTTCTTGGGCTC TCTCCTGGCCATACCGCAGGCAAAATCTGTTACAAGAAATCGTTGGTTACCGTGCGGATATTATCTGTCTTCAGGAGATTCAAAGTGACCACTATGAGGA ATTTTTTGCCCCTGAATTGGACAAACATGGCTATTATGGTCTTTACAAGAAAAAAACAAATGAGGTATACAATGGCAACCCCAATGCAATCGACGGTTGT GCAACATTTTTCCGCAGAGACAGATTTTCACATGTGAAGAAATATGAGGTTGAATTCAATAAGGCTGCACAGTCATTAACAGATGCTATGATTGCACCCC CACAGCAAAAAACTGCCTTGAATAGGCTGGTTAAGGATAATGTTGCACTCATAGTGGTTCTAGAAGCAAAAGTTAACAACCAGCCTGTTGATAGTCCAGG GAAAAGACAGCTACTTTGTGTGGCAAACACACATGTAAATGTCCACCAGGATTTAAAGGATGTCAAACTCTGGCAGGTGCATACTCTCTTAAAAGGGTTG GAGAAAATAGCTGCAAGTGCAGACATTCCTATGTTGGTTTGTGGAGACTTTAATTCAGTTCCAGGAAGTGCACCTCATGAACTTCTTGCAATGGGGAAGG TAGATCCATCACATCCCGATTTAGCAGTTGATCCACTTAACATATTGCGGCCTCTCAACAGATTGGTTCACCAGTTGCCACTGGTTAGCGCATATTCATC TTTTGCAAGAACTGTTGGTCTTGGACTTGAGCAGCATAAACGAAGACTGGACAGCACAACGAATGAGCCTTTATTCACGCATGTCACTAGAGATTTTATC GGCTCTCTGGATTACTTATTTTATACAGCGGATTCATTGGTTGTGGAGTCATTACTCGAGTTATTGGATGAGGAGAGTTTAAGGAAAGATACAGCACTTC CTTCCCCTGAATGGTCCTCCGATCATATAGCTCTCTTAGCTGAGTTTCGCTGCTGCAAAAATAGATATAGGCGTTGACTCATAAGGTCAAATGGGAGATA CAGATAAACAAAAAGGTTAAAAGAAGCCTTTGTTTGATAAGTTATTGTACAATTGGTAGATCATAGCTTTGCCTTTTTTTCCAGGTACCTCCATGTTAGG GGGGGTCCTTGCAGTGATCTGCTTTGTATTATGCCACCTTTTGTCTCATAGATAAGTCATGGATTATGGTTTACTGATTTGCCTCCGGCTCAAATCTTTT CTATAAAATGAAATTTTTCTTAGTTTATTTTTGTGCGTTTCCCGGAAGTGTATCTTTCACGTTTAACAGTCCCGCGACACCATTTTGAGTTTGAAATCTT GTATAACAATCTCTCTGCTTGCCGGGGAAAGGGTGTATATGAATTGAGTAATCTAGTGGCTGTTGAGCCCAGGGCTTTAATATCTCCCACTATTGTGGCC ATAATCTTCATAATATAGACTGTTTTTATTTGCTACATTCGGAATATGCCAAAGTATGAGAACAATACCCATATTGTCTAC BLAST |
| Tissue | flowers |
| Gene name | LI_gene_72742; |
| Additional information | details; |
| FPAB | abscising flower pedicels |
| FPNAB | non-abscising flower pedicels |
| LF1 | lower flowers stage 1 |
| LF2 | lower flowers stage 2 |
| LF3 | lower flowers stage 3 |
| LF4 | lower flowers stage 4 |
| UF1 | upper flowers stage 1 |
| UF2 | upper flowers stage 2 |
| UF3 | upper flowers stage 3 |
| UF4 | upper flowers stage 4 |
Annotations of Ll_transcript_259935
| Blastp | Carbon catabolite repressor protein 4 homolog 2 from Arabidopsis with 75.41% of identity |
|---|---|
| Blastx | Carbon catabolite repressor protein 4 homolog 2 from Arabidopsis with 73.83% of identity |
| Eggnog | Ccr4-NOT transcription complex, subunit(COG5239) |
| Kegg | Link to kegg annotations (AT3G58580) |
| CantataDB | - |
| Mirbase | - |
| Ncbi protein | Link to NCBI protein (XP_019442961.1) |
| Pfam | zf-MYND-like zinc finger, mRNA-binding (PF15801.4) |
| Rfam | - |
| GO | Links to GO: General; Genes and gene products; Annotations; Ontology; |