| Id Trinity | FTRINITY_DN58014_c0_g2_i3 |
|---|---|
| Name Transcript | Ll_transcript_134994 |
| Sequence | GAGGACTCAAACCCTTTCCATGTCTCACTTTCTCTCTCTATCAAACATTCATCAGAGAGAGAGAGAGAGAGAGAGAGAGAGAGTAGAAACAGTAGAAGTA GGTGAAAAGCAAAGAACCCTTGTCTTCTGATTATTATTATTTTCACATTCACTTTCATCTTTTCTCTTCCATCCAATCCAATCGGTAACTGCATCAAAAT CGCTCAGAAAGTGACACAATTTTTTCAAAAATAGGAAAACCCAGAATAGAAGGACTTGCCCTTGTTGTGTTTTGTTTGAGGATAGAATCAAGTTCGGATT TTGATTCACCCCGTTCAACCCCAAGTGTTTAAAGTTTGTTGCTTTTGTGGGTCAGATCTTAGGGATTCATTCTTGTCTTTGAAGCTCTTATTAGTGTGTG GATCTCTCTCATGGTTTGAGTCAATGGAGAAATGGGATTGATTTTGTGGGGTTTGAAATGTGAGTGAGTTTTGTTCAATTTTAGTTTTTTTTTGCGTGTT TTGATTTAAAGTAAGTGAGAGTGGCAAATGGCAATGGTGGCTCTTTAGTCTTCAGTGATAAGCTCCGTGTGTGGAAAATGTCAGCTTCTATAGCAGCTTT CGAGCGACCTCGACCCGGGGCTTCTAATACGGTTTTCAAAAGTGGTCCACTTTTCATATCATCTAAAGGGATAGGATGGAAGTCTTGGAAAAAGCGGTGG TTTATACTGACACGCACATCGTTGGTTTTTTTCAAAAATGACCCTAGTGCCCTTCCACAGAGAGGTGGTGAAGTAAACCTGACATTGGGTGGTATTGACT TAAATAATTCAGGGAGCGTTGTTGTTAGAGAAGACAAAAAACTGCTTACGGTATTATTCCCGGATGGACGTGATGGGCGTGCATTTACTCTTAAGGCTGA GACATCAGAAGACTTGTTCGAATGGAAGACATCTCTGGAACAAGCCCTTACACAAGCACCAAGTGCTGCCCTTGTTATGGGACATAATGGGATTTTTCGG AATGACACAAGTGATTCTATTGAAGGGTCTTTCCATCAATGGAGGGACAAACGTCCAGTTAAGTCTTTGGTTGTTGGAAGACCAATTCTATTAGCACTGG AAGACATTGATGGTGGTCCATCTTTCCTTGAAAAAGCTCTTCGGTTTCTAGAAAAATATGGGACTAAAGTTGAAGGAATTCTGCGGCAGTCTGCAGATGT TGAGGAAGTAGATCGGAGAGTTCAAGAATACGAGCAAGGGAAGTCTGAATTTCCTTCTGGCGAGGATGCCCATGTTGTTGGTGACTGTGTCAAGCATGTT CTCAGGGAGCTTCCCTCATCTCCAGTTCCAGCTTCTTGCTGTACTGCTTTGCTGGAGGCTTACAAAATTGATCGCAAGGAAGCTAGACTTAATGCAATGC GCTGTGCTATAGCAGAGACCTTTCCAGAGCCAAACCGACGTTTGTTACAGAGAATTCTGAAGATGATGCACACAATTGCTTCTCATTCTCATGAGAATCG GATGACTCCATCTGCTGTTGCTGCTTGCATGGCACCCTTGCTCTTACGGCCTCTACTAGCAGGAGAATGTGAACTGGAGGATGAATTTGATGTTGGTGGT GATAATTCAGCTCAGCTTCTTGCTGCTGCTAATGCTGCTAATAATGCTCAAGCAATTATTACTAATTTGTTGGAGGAGTATGAGAATATATTCGATGAAG AAAATATACAGAGATGTTCCATGTCAGCAGATTCACGGGTTGAAAACAGCGGAACTGAAGATTCGACTGATGATGATAATATAGACGTGAAAGAAAATGG TGCTCACGATGCAGAGAATGATGTTGGTCCAGAGACAGATGATGATGCTGAACGTGTACACAGTGGAAAATTGAGTGAAAGTAGTGGTTATGCGGGAAGC GATCTTTATGATTACAAGGCATTTGGAGGCGATGATTCTGATATTGGATCCTCTACTGGTATCCACATGAAGACTGAAAATAAAAATCGAAATGCTGATC CGGTTACCCCATCGCCTGTGGACCAAAACAAACAAAGAAATGGTAATGAGAACTCAGTTAATGAGAAGGATACTCCAAATTTGTTCCCTTCCACTGAATC CTATCGTTCTATGGGTGAGATTTTATCTTCTATGGACTCTGGAAACCATTTACCCGTGCTTGGGATTGAATCAGGTTCTGCAAAGCAAACTGTTAAAGCT AGTAGCAGTAGTTTCAGTTCTAAACGGTCAACATTCTGGGGAAGGAGCAATCCGAGGAAGACACCGTCAGTGGAATCTGTTGATTCTTCTGGAGAAGAGG AGCTTTCTATCCAGAGGCTAGAGATTGCAAAAAATGATTTGCAACACAGAATTGCGAAGGAGGCTAGAGGCAATGCAATTTTACAAGCAAGCTTAGAGAG ACGGAAGCAAGCTTTGCATGAGCGGCGTTTGGCGCTTGAACAAGATGTTTCAAGATTGCAAGAACAGTTGCAATCTGAGAGGGATCTTCGAGCTGCACTG GAAGTTGGTTTGAGCATGTCTTCGGGACAGTTTTCCAGTTCGCGTGGCATGGATTCTAAGGTTCTTTCATCCTCTATAGAAAATTTCTATTCTTTTCCCC TTTTAGTTCTTTCCCGGTACACATAATCTTATGAAATCTGCCACGTAAAGACAAAGGCTGAGCTGGAGGAGATTGCACTTGCTGAAGCTGATGTGGCCAG ATTGAAGCAGAAAGTTGCGGAACTTCACCATCAACTTAATCAGCAACGACAACATCACTTTGGTTCACTTGCTGACGTGGGTGATCGATACCAACAGACC CAAAATCACCCTCAGCAAAGATTTCTTCAGCAAGATTTTGATTCAACGCTTGCCTTCGTCAATCATGAAAGGAAACAAAGGACTGAGGAGAGTTTGTTGA GCACAGATTGGAGAAATATCAAAGGACAAGTATTGGCAGGCAGTAACGGGAGTAGGCAGCCTTCTCGGAAGCAATTCATGGACTCCAGTCCCAGTGATTC AAAAAGCACCGAGGCATCAACAAACATATCCGTTGATGAGCTTGGTGCTGTTGATTCTGGCTCAGTTCCCTCCACCTCAAGGGCAGCAGAGGTGATAGAG TATGGAAGACATCCATCTGTAGCATCTTCAACATTAGTAGAGTTAACTACCCGTCTCGATTTTTTCAAGGAAAGGCGTTCGCAGTTGATGGAACAGCTCC ATAACCTTGATTTGAATTATGGTTCTACAACTTGGCAAGATTCCGTCTATAAACCGTCGTCGCCGTCATGGAGTTGAGATCTTGGTCAAATTTGTGCTGC TTTATAAAATCCATGCTCAATAATTTTGGCTCACATGTTGTATATCCTGACTCATTGCATATATTTGTTGTGTCCTTTGTGGTCTATGTACTGCTTTATT TATATATAAAAATACAACTTTGGTAGTGAAAGTTCATTTGAGTTGAATTAAGTAGCTTCTCCCTTTGTTGTGCATCAACTTTTTCTCTTTTTAATCTTTC AGAATTGAATTTCTTTGTTTCTTTGTTATGTTATTTGTTATGGAGTTTGGTGTAATTATATTATTTGTTATGTTAGTAGCTTGGGAAATTTTGTTGTTGA ACAAAGCTATTATGAGGAAATTTTATTTCCTTTTTAGCAAATTCTTTGTACATATGTGTGAAAAATCAATGTTATGTTGTTACTGTGTATCAAAATTATG TTCAAA BLAST |
| Tissue | flowers |
| Gene name | LI_gene_73527; |
| Additional information | details; |
| FPAB | abscising flower pedicels |
| FPNAB | non-abscising flower pedicels |
| LF1 | lower flowers stage 1 |
| LF2 | lower flowers stage 2 |
| LF3 | lower flowers stage 3 |
| LF4 | lower flowers stage 4 |
| UF1 | upper flowers stage 1 |
| UF2 | upper flowers stage 2 |
| UF3 | upper flowers stage 3 |
| UF4 | upper flowers stage 4 |
Annotations of Ll_transcript_134994
| Blastp | Rho GTPase-activating protein 7 from Arabidopsis with 71.79% of identity |
|---|---|
| Blastx | Rho GTPase-activating protein 7 from Arabidopsis with 68.09% of identity |
| Eggnog | rho GTPase activating protein(ENOG410XR4E) |
| Kegg | Link to kegg annotations (AT5G19390) |
| CantataDB | - |
| Mirbase | - |
| Ncbi protein | Link to NCBI protein (XP_019461528.1) |
| Pfam | PH domain (PF00169.28) |
| Rfam | - |
| GO | Links to GO: General; Genes and gene products; Annotations; Ontology; Links to GO: General; Genes and gene products; Annotations; Ontology; |