| Id Trinity | FTRINITY_DN58054_c1_g1_i6 |
|---|---|
| Name Transcript | Ll_transcript_136213 |
| Sequence | CGATAATATCCATGTATCTAATAACAGTGAATATCAAATGTGTACTGTGTTCAGAATCAAAGTTCTATAGTTCTGTTCTGTCTATGTTGTTCGGCTTTTA GATTGATTCAACAAACAACACTGATACAAAATGCAGGCTTCAATTGCATGCTCTTCACTTCCACATAGAAATATAGTTCTTCCACCAACCCTTTCTCCCA AACCTAATTCTACTTTTACTTTCTTGTCTCTAACCAAATCATCCTCTTACTTCACACCAAGATGCACATTTCAACCTCAACCATTACAAATCTCATCACC TCCATCAAAATCAGTAAGAGTTTCAAGGTCTAAAGTTACTCCACTTCTGTGCGGCATTTCGTCGAACGGGTACAGTGCAAATGAAGGTAGGAGTATTAGG GAGTGGGTTGAGGTGGTCGGTGATGCGATTTCAACTGCATTTCCGTTGTGGGTAACAATTGGGTGTGTTTTGGGGTTGATGAAACCAAATTCTTTCAATT GGGTCACTCCACAAATGAACATGGTAGGCCTCATTATCGTTATGCTTGGTATGGGTATGACTCTCAGTCTTGAAGATCTTCGTGGGGCTCTTTCTATGCC TAAGGAAGTTCTCTCTGGCTTTTTTCTTCAATATTCGGTGATGCCATTATCTGGATATTTTATAAGCAAACTCTTAAATCTTCCACCACATTATGCAGCA GGATTAATATTAGTTGGTTGCTGTCCAGGAGGCACAGCTAGTAATATTGTCACTTATCTTGCACGTGGAAATGTCGCACTTTCTGTGATAATGACAGCTG CAAGTACTGTATCAGCCGTGGTCCTGACTCCTTTTCTGACAGCCAAACTTGCTGGTAAGTTTGTAGCTGTGGATGCAGCTGGCTTATTGATGTCAACATT ACAAGTTGTGCTCTTACCTGTATTGGCCGGTTCAATTCTGAATCAGTATTTCCAACCTCTTGTTAAACTTGTCTCTCCATTGATGCCACCCATGGCTGTA GCAACTGTCGCAATTTTGTGCGGAAATGCAATTGCCCAGAGTTCTTCTGCCATCCTTATGTCCGGCGGACAAGTAGTTTTAGCATCATGCATTCTTCATG CTTCTGGCTTTTTCTTCGGTTACATACTTGCAAGGTTTCTCGGGATAGATGTGTCATCATCCCGAACAATATCCATCGAGGTTGGAATGCAGAACTCAGT GCTTGGGGTTGTTCTGGCTGCTCAGCACTTTGGAGATCCCCTAACTACAGTACCCTGTGCTGTTTCAAGTGTGATTCACTCAGTCTTTGGTAGTATCCTA GCAGGAATTTGGAGACGCTCTGTGCCTGCTGAGAAGAAGAAGGACTGATATATATTGCTGGACAAGGTTGATTTATGGAGTGTAATATCTATACACTGTT AGTATAAAGATTTATGCACAGTCAGTATATCATTCACCGTTCGTTTATATTATTTTTTGTGAAGAGTCAATGTTAATTAAAAATGAATGGTGAATAATAG GCTGACTGTATATGAAATTTTTACACTGTGAGTGCATACATTTTTCTTTCTAATGTGTATGTGCATATGATTGTTTCATTGGTGACTTGTATTAGTTTCT AGTCACCAATTAAAATGAATTTTGTCAAAGTCCTTCATAATATTTTCAAATAACATTTTAACTTCATCCTAGCAACCAAGCAAGAGTAGCATGCCAAGCA GCATATGAACAAATATCTTATTATATCAGCAAATAAAATGGAAC BLAST |
| Tissue | flowers |
| Gene name | LI_gene_73773; |
| Additional information | details; |
| FPAB | abscising flower pedicels |
| FPNAB | non-abscising flower pedicels |
| LF1 | lower flowers stage 1 |
| LF2 | lower flowers stage 2 |
| LF3 | lower flowers stage 3 |
| LF4 | lower flowers stage 4 |
| UF1 | upper flowers stage 1 |
| UF2 | upper flowers stage 2 |
| UF3 | upper flowers stage 3 |
| UF4 | upper flowers stage 4 |
Annotations of Ll_transcript_136213
| Blastp | Probable sodium/metabolite cotransporter BASS1, chloroplastic from Arabidopsis with 71.82% of identity |
|---|---|
| Blastx | Probable sodium/metabolite cotransporter BASS1, chloroplastic from Arabidopsis with 76.52% of identity |
| Eggnog | bile acid(COG0385) |
| Kegg | Link to kegg annotations (AT1G78560) |
| CantataDB | - |
| Mirbase | - |
| Ncbi protein | Link to NCBI protein (XP_019456961.1) |
| Pfam | SBF-like CPA transporter family (DUF4137) (PF13593.5) |
| Rfam | - |
| GO | Links to GO: General; Genes and gene products; Annotations; Ontology; Links to GO: General; Genes and gene products; Annotations; Ontology; |