Ll_transcript_80682

Id TrinityFTRINITY_DN58115_c1_g1_i18
Name TranscriptLl_transcript_80682
SequenceCTAATCCCAAAAAAAATACTTTTTTATCTTAGATTTATTTAGAAGGAGAAAGTTGTGAGTGAAGCAAAAGCATATACAATAACTTGTAGTTTGCACTTTG TACCTTGTTGAGCATCTTAGCAACTGAGTTGACTTGGGTGGTGTAGTTGCATACTTCCCAAAAACCCAACAAAAGGACAAAACCTCCTCATTATAGAGTA ATGAGTGGAGCGCGTACACTCACACCAACAACAACTTCAGCCATCTTATACACACAATTAAACCAGGGTTCTTCTCACTTCACAAATATCTCTAACCCTT CAACCCCTTTTCCTTTAATCCAATTCCAACCTCTTACTTTCCATAAAGAATCTCAATAGGTGCATGAAATCTGGTGATCTCCCATCCTATTGAGAATGAG AATATCACCGGAAATTTTGATTAAATAACAGAAACGTACTGCTGGAAAATGGGAGGTTGCTGTTGTTCTGCAAGAAAACCTCACCTGCCGGGAACACCAG TGTATTACTATGTTAGTAATTTTCTATCTCTAAAACTTGATTTGTAGCTTTCGTTACAATATGGTTGCTTATAAGCTTACGTCTAGTAATGTCACTATTT GTTTATGTCATTTTCAATTAGAATAACTTTATGATGGATGATAGTGCATCTTTGATATCATCTCATGACTCATCCATATGGTATTCTCCTTTACTTATCC TACATCTGTTAACTCATGAGCCCTTATAGCCCCTGGAAAAAAAGTTGAAAAGAAAAATGCTCGGTTTTTAAGAAACCAAAAAGAAATAATGAGATGATCT CCAAACTTAGCTATAATTCTGTTATCCCTCATTCCCTCCTTTAGTTGATAACATTCATCAGTGGAAACTCTTGGAATTATATTCAATGAAGAATTCATTA CAATGTGATATTTACAAGACTAAATAAATAGAAGAAAGGAAGTTCCTAGAATATTAAGGTCCCAATACTTCTTTGAACTAGAAACTAATTTGTTGCTATG TAAATTCCAACTCATTAGCAACCTGCTAACACCTCCTCAAATTAATGCGCTTGGTCAAGAATCAATTAGACTATGAGAAATTTATGATGATGCCGAGATA TGGCCTTGGTAAACACATCAACCAGTTGTAGATCCGTGGTGACACTGGAAGCAAGATAGCATGATTATCAAATGCTTCACAAATGGAATGATAGTCCACC TCAATATGCTTGGCGCACTCATGAAAGACCAGATTAGCAGTAATCTAGATAACACTTGTTTTATTTGCAAAGAGGGGAGCGGGATGAAGAAGTCCAAGCT TAGCTAACAAACCGTGCAGCCAAGTGATCTAATATCAAGATAGATACATACACGATATTCAGACTCAGTTGAAGACTTGGATACTGGAGCTTGCTTCTCA CTCTTCCAAGAAATGAGGACGTTATCATGAAACATACGGCAACCTGTAACAAATTGCCAAGTGCCCATGCAGCCAGCCTAACCTCACTATAAGTAATCAA CCGAAGGGAAGACTCAATAGAAAAAACATAAACCATGGCTGGCAAAACCTTTCAAGTAGCAAATGATATGCAAACAACATCCAGATGAAGATGTCAAAGG AGTGTGCATAAACTGAATCATGTGTTGAATGGCAATAAAATGTTAGGTAGTGTGATGGTCACATAATTAAGGCTCCTGGCCAATGGATGACACAGCAATG GATTGAGAAGGGGCTCACCTTCCTCACGACGGTATTCGTGTTTACCTCGAGGAGTGTGTAAACAGAAGAAGCAGATTGAAAGCCAACCAAAGAGACCAAG TCCCGGCATATTTTTTTTTATGTTAAAAAAGTACAGTGGATCGTATCATACTCCAAGGTGCAAAAATAGTGGAGGGAACTAAGATCCGTCATGTGAAACA TGGCTTGAAGCAGTTGGCTTACTTTTAGAAGTTTACATGCAGAACAGCCAAAAGATAAGGGATAGGAAGAAGAATGTTTTTTACTACCAAAAAATCCATG TTTAATAGCTAGATTAAACAAGGGAGTTCCGTAACCCAAACATTCATGCCATATTGCACTTCGATTTTCTAGAGGTAGAAGCGAAATAGAAAAACTCTAG GAGTAGTCAAGTGTAGAGGAAACAATCTGTTTACTTCAGCTCCATTTGTGTTCCCTTCCCCAACTCATAATCCTGCACAAGACAACCACCACGAGAAAAA TGAATGTCACAATTGTTATCTACCACTCGACCAACTGAAATTAAACTAGAAGAAAGTCCCCGGGGCACTAGCACATAATGAAAAGGGGAATCAATATCCC GAACTGCAGCATTAGGGAGAGTTCTAGCATTCAATTTGATTATGTTCTGTACCAGAATAGGGTAAAACATTATTAAGAAATCGGATGTACCGGTCATACG ATTCGAAGCCCCAGAATTAACAAAACTAAGGCTTGAGAGAATTTTTAGTCTTACCTTGAATGGCCAAGACTATCCTTGGACTTGGCTTTTATTGAGAACA TGCTGACAAGAAAAATGAGCACAAGGAAGCAATTTCATTGTCATCTTTCAATTTGCAAAGATTCTTAGGCTGAAACAAAAAATTTAGGCAATTTCCATCT TTTCCATAATGCCCATGCTATCTTTTTTCTCTTACTAATATAAACCGCTGCACTTTCATACGCATGATCCCCTTGGTGATGTCATACCATATAGAAATGG TGGCTGGGTTCTAGTTGAACATGGACTGTTTTTATTGTTCTCTTCAAAATAAGTGTTTCTAGAAAAATAATCTTAGTTTATTGCTTTGGACAAAGCTTTA TTTTGTCATGAAGCCGCCAACTTTGACCTGAAATCTGAAAAAAAAACTCCTGTTTACAGTACCCACCATCTTTGGCAGAGCGCGAGTCGTTGAACACTAC CGATGGTTCGTCTGCTTCACTCACTGCTGGATTGCTCGTAGGTTTGGACATAGAATCCTCCACACCAGATACATATCAGTCCCCTCCTGTACCTCTGCCT TATGATACAGTCCTTGGAGTTCCAGCATCAACGTACTCTGAAGCAGGCAGAGAAACACCTAGCGGTACTAGTTTTGAAACTTCGGTGAGATGTGAAGATC TTGTAGAATCAGAATGCAAAGCTCAAGCTGATTCCGAACCCATGTCTCCAAAGAAACCAGAACTGTCAAAATCAAATGAATCTCATGCATTAGCGACAGA AGAAGAGGATGTCTGTCCAATCTGCCTTGAAGAATATGATGTTGAGAATCCTAAAAATCTGACAAACTGTGATCATCAGTTTCATCTCTCTTGCATTCTT GAGTGGATGGAAAGAAGTGATTCCTGTCCTATATGTGATCAGGATATGATATTTGACGAAATGACACTGAACTAGATTGATTCTCTTGAAATGAAGCTTG CTAAATATCTGTGTGGAAGATAGATGAAACCGGTTGGATGATGGTACAGATTTCATTTTCGAATCGCCGTGCTTTTAAAAAGTCGTTGTTCTAGTAGGTA CATTCATTAGGGGAATAGAATTGTTAGAAGAAGAATGAGGAGGTTTTAACTGAATGCTACAACCACATTGCTGAAGAAAGATGATGGAATTCATGTTCAA AAATAGCTTTTTACTTGTGTTGATTTCTTGTTCTCATTTCTTGTACAAATTTATCAATGTTTATTTTATTTCAATGCTATTTTGTTTGTTTGAAAGAAAA AGAAAGAAAAATTATATTGGTG BLAST
Tissueflowers
Gene nameLI_gene_74332; 
Additional information-

Expression of Ll_transcript_80682

Labels

FPAB abscising flower pedicels
FPNAB    non-abscising flower pedicels
LF1 lower flowers stage 1
LF2 lower flowers stage 2
LF3 lower flowers stage 3
LF4 lower flowers stage 4
UF1 upper flowers stage 1
UF2 upper flowers stage 2
UF3 upper flowers stage 3
UF4 upper flowers stage 4

Annotations of Ll_transcript_80682

Blastp-
BlastxProbable E3 ubiquitin-protein ligase RHB1A from Arabidopsis with 51.81% of identity
Eggnogzinc ion binding(ENOG41121N2)
KeggLink to kegg annotations (AT4G00335)
CantataDBLink to cantataDB annotations (CNT0000117)
Mirbase-
Ncbi proteinLink to NCBI protein (XP_019462195.1)
Pfam-
Rfam-
GOLinks to GO: General; Genes and gene products; Annotations; Ontology;