Ll_transcript_79799

Id TrinityFTRINITY_DN58142_c0_g1_i7
Name TranscriptLl_transcript_79799
SequenceAAAAAAATAAGGTAATTGCAATCGTGGGCTTAGACTTGGGCTTAGCCCATTTCCCTATTGTTGCCCTAGAACCCGAAAATCCTCAACCGCCTTCAAAGAC GGTGAGCTTCACTCTCTTCCACTTTCCTCTGTTCTTCTTCCATTTCAACACTATCACAACATGGACGATAGCTTATACGACGAATTCGGCAACTACATCG GACCCGAAATTGACTCCGATATTGATTCCGATAGGGAAGAAGACAATGACGACGACGACGACCAAGACAGGCTCACCAACCACCGCGACGGCGGCGCCTC CGACGACGACGGTCCCAACAATGGCTGGATCACCACCTCCAACGACGTCGACATGGTGGACAACCAGGTCGTGCTCGCGGAGGACAAGAAGTACTACCCC ACCGCCGAAGAGGTTTATGGTGAAGACGTTGAAACCCTAGTTATGGACGAAGATGAACAATCCCTAGAGCAACCAATAATCAAACCCGTTCGGAACATCA AATTCGAAGTTGGAGTGAAAGATTCAACCGCATACGTGTCTTCTCAGTTTCTACTTGGCCTAATGTCAAACCCTACTCTGGTCAGAAACGTTGCGCTTGT TGGGAACTTGCAGCATGGAAAAACGGTGTTCATGGATATGCTTGTGGAACAAACGCATCATATGTGTACTTTTGATCCGCAGAGTGAGAAGCATATGAGG TATACTGATACTAGGATTGATGAACAAGAACGGAGGATTTCGATTAAAGCGGTTCCGATGTCTCTCGTGATGGAGGATAGTAATTCTAAGTCTTATTTAT GTAACATTATGGATACACCTGGCCATGTTAATTTCTCTGATGAAATGACGGCTGCGTTGAGGCTTGCTGATGGCGCTGTGTTGATTGTCGACGCTGCTGA AGGAGTCATGGTTAACACAGAGAGGGCGATACGCCATGCAATCCAGGAGCGACTGCCTATTGTCGTTGTCATCAATAAGGTTGACAGGCTCATAACTGAA CTTAAACTGCCTCCAAAAGATGCTTACCATAAAATAAGGCATACACTGGAAGTGATCAACAACCATATATCTGCTGCATCCTCAATTGCTGGAGATGTCC AAGTTATAGACCCAGTTGCTGGAAATGTTTGTTTTGCAAGTGGTACTGCGGGATGGTCCTTTACATTGCAATCATTTGCTAAACTATATGGGAAGATACA TGGCATTCCTCTGGAAGCTAACAAATTTGCTTCTCGTCTTTGGGGAGACTTCTATTATCATCCAGATACCAGAACCTTCAAAAAGAAACCTGCTGCCAGT GGAGGAGAACGATCTTTTGTTGAGTTTGTGCTGGAACCACTCTACAAGATATATAGCCAAGTCATTGGGGAGCATAAGAAGAGTGTAGAAACAACTCTTG CAGAACTTGGAGTCACCCTCAGTAATGCAGCTTATAGATTGAATGTTAGACCTTTGCTAAGGTTGGCTTGCAGCTCAGTTTTTGGTGGAGCTTCAGGTTT CACCGATATGCTTGTTCAGCATATTCCTTCACCAAGAGATGCTGCAATTAAGAAAGTTGACCACATATATACTGGGCCCAAAGACTCAACCATCTACAAA GCCATGTCTCAGTGTGATTCTTTTGGGCCCTTAATGGTTAATGTGACCAAATTGTACCCAAAATCTGATTGCAGTGTGTTTGATGTTTTTGGTAGAGTGT ATAGTGGCAAGATACAGACAGGACAGACGGTACGTGTTCTAGGAGAAGGGTATTCGCCGGATGATGAGGAGGACATGACTGTAAAAGAAGTGACAAAGTT GTGGGTGTATCAAGCTAGAGATAGGATGCCAATAGCTGAGGCTCCTCCTGGTTCTTGGGTTCTCATTGAAGGTGTAGATGCTTCCATCATGAAAACTGCC ACTATCTGTAATGTGGATTATGATGAGGATGTATATATATTCCGGCCTCTTCAATTCAATACTCTGTCAGTGGTAAAAACAGCTACCGAGCCATTAAATC CAAGTGAGTTGCCAAAAATGGTAGAGGGATTGAGGAAGATAAGCAAGAGTTATCCTCTGGCAGTTACTAAAGTTGAGGAGTCTGGGGAACACACTATATT GGGGACTGGTGAATTGTACTTGGATTCAATTATGAAGGATCTTAGAGAGCTCTATTCTGAAGTTGAAGTCAAGGTGGCTGATCCTGTTGTCTCGTTTTGT GAAACTGTTGTTGAATCTTCATCAATGAAATGTTTTGCCGAGACACCAAACAAGAAGAATAAAATAACTATGATTGCCGAGCCACTAGAAAGAGGTCTTG CTGAGGACATAGAGAATGGTGTTGTTAGCACTGACTGGAATAGAAAGAAACTTGGTGAATTTTTTCAGACCAAGTATGACTGGGATCTCCTTGCTGCACG GTCAATCTGGGCATTTGGCCCTGATAAGCAGGGGCCAAATATTCTGTTAGATGACACCCTTCCCACTGAAGTTGACAAGAACCTTTTGAATGCTGTAAAG GATTCCATTGTTCAGGGATTTCAGTGGGGTGCACGAGAGGGACCTCTATGTGATGAACCCATCAGAAATGTTAAGTTCAAGATTGTTGATGCAAGAATTG CCCCTGAACCACTTCATCGGGGATCCGGCCAGATCATTCCAACAGCACGACGGGTGGCCTACTCTTCTTTCCTTATGGCTACCCCCAGGCTTATGGAACC AGTATATTATGTAGAGATACAAACGCCTATAGACTGTGTATCTGCAATATACACTGTGCTATCTCGTAGACGTGGACATGTTACTGCTGATGTTCCTCAA CCAGGCACGCCAGCTTATATTGTTAAGGCATTTTTGCCCGTGATAGAATCTTTTGGTTTTGAGACAGACTTGAGATACCATACCCAAGGTCAAGCATTTT GCCTCTCAGTTTTTGATCATTGGGCTATTGTTCCTGGAGATCCTCTGGACAAAAATATTGTTTTACGGCCCCTTGAACCAGCACCAATCCAGCATCTTGC TCGTGAGTTTATGGTGAAAACAAGACGTAGAAAGGTACAGTTTTTCCTCCTTGTTTTGAGCCGTAACCAACTATGGTAAAGTCTTACTACTATTTTCAAC AAAAAAAATCCCTGGACATGATAATCATATTCCACATTTATGCACTGATGATTTGTTCTGTATTCTTTTGTGAGAGAAAATGGAAGATAAATAGAAAATA TCTTTTACTAGAAGACCGAGTATGGAACTTAGGAATGTCAGTGAGATTTTAATGCCTTTGCTTAACTAATATGCATTTAATACATGTTGCTGTCGCATTC TTGCAGGGAATGAGTGAAGATGTAAGCATAGGTAAGTTCTTCGATGAGGCTATGATGGTGGAACTGGCACAGCAGGCAGCAGATCTTCATCAACAAATGA TGTGAAGTTTGGTCATTTCCTATGCATATCAATTTGATCATGTTGTATTCTTCCGAAGCTTGGTCCCTTGAGCTGTTCCACTATGAAACTAGAAACAAGT AATGTGATGCAAGCAAAAATTAGAAGTTCATTGCTCTGCGAGTTGCCATGGATTTGACATTTCAATTTGACGATCTGGTGTTAACTCATATTAGAGACAT CTTGTGCTTCTATAGTGGAACGTACCAGTAAGGAATGAGGTATGTACCACTTAAGCAGAAAAATGTACCAGTAACAGCAGTTCTTGTTGAACTTTCATGG AATGAAATCATTAAGGAATGAGGCATGCAGCAAAATATTAGAGACATCTTGTGCTTCTATAGTTGACAGAGAAATGCCTCTACAATGAGGATTAATTAAA CATTTATTTTTTCATTGGTTAAACTTCAAATCAATGTAAATTAAGAGTCCAATGATGTGTGCACAAATCATATTTTCTACATGTCCATTAATATTTCCTC CCAACCAGTTTAACTCAATGGGATAAATAATTATATGATAGTTACACTTCTATGATAA BLAST
Tissueflowers
Gene nameLI_gene_74574; 
Additional informationdetails; 

Expression of Ll_transcript_79799

Labels

FPAB abscising flower pedicels
FPNAB    non-abscising flower pedicels
LF1 lower flowers stage 1
LF2 lower flowers stage 2
LF3 lower flowers stage 3
LF4 lower flowers stage 4
UF1 upper flowers stage 1
UF2 upper flowers stage 2
UF3 upper flowers stage 3
UF4 upper flowers stage 4

Annotations of Ll_transcript_79799

Blastp110 kDa U5 small nuclear ribonucleoprotein component CLO from Arabidopsis with 86.01% of identity
Blastx110 kDa U5 small nuclear ribonucleoprotein component CLO from Arabidopsis with 86.01% of identity
EggnogCatalyzes the GTP-dependent ribosomal translocation step during translation elongation. During this step, the ribosome changes from the pre-translocational (PRE) to the post- translocational (POST) state as the newly formed A-site-bound peptidyl-tRNA and P-site-bound deacylated tRNA move to the P and E sites, respectively. Catalyzes the coordinated movement of the two tRNA molecules, the mRNA and conformational changes in the ribosome (By similarity)(COG0480)
KeggLink to kegg annotations (AT1G06220)
CantataDB-
Mirbase-
Ncbi proteinLink to NCBI protein (XP_019441022.1)
Pfam116 kDa U5 small nuclear ribonucleoprotein component N-terminus (PF16004.4)
Rfam-
GOLinks to GO: General; Genes and gene products; Annotations; Ontology;
Links to GO: General; Genes and gene products; Annotations; Ontology;