| Id Trinity | FTRINITY_DN58219_c1_g1_i6 |
|---|---|
| Name Transcript | Ll_transcript_120936 |
| Sequence | CAAGTCTCAATTATCACCTTCATTTGTTTCTGTATCTTCACCCCTCTCTTTGGAGGGTTTTTTTTCTCTTCCTTTTTTTCTTCTTTTTTCTTTCCTTTTT TTCTTGTTTTAACCTTTGATTTTGTTCAGTTCCTTTTATTTATAATTTATCCCTTTCTTCAATCCCCTTGAACCCTAACCCTAGCTGGAATTGAAGATGC AGCAGCAGCAGAGGTTAAGGAATCATGCCATGATGCAACACTCCATGTTCAACCACCCTTCTCTCCTTACTCCCCCTCAGATAGAGCCTATCTTGAGTGG AAATCTGCCTCCTGGCTTTGATTCGAGTACATGCCGCAGTGTTTATGTAGGCAACATTCACCCTCAGGTTACAGAAACCCTTCTTCAAGAGCTTTTTTCA AGTGCAGGTGCCCTTGAAGGATGCAAGCTCATTAGAAAAGAGAAGTCCTCATATGGCTTTGTGGACTACTTTGATCGCCGTTCAGCTGCATTCGCCATTG TAACTCTCAATGGGAGACAAATTTTTGGGCAACCTATTAAGGTTAACTGGGCTTATACTAGCAGCCAGAGAGAGGATACGTCAGGCCATTTTAATATTTT TGTTGGTGATCTTAGCCCCGAGGTGACAGATGCAACATTGTTTGCTTGCTTCTCAGTATATCCTAGTTGTTCAGATGCTAGAGTAATGTGGGATCAGAAG ACAAGCCGCTCCAGGGGATTTGGCTTTGTATCTTTTCGGAATCAACAGGAAGCACAAAGTGCCATAAATAATTTAACTGGAAAGTGGCTTGGAAGCAGAC AGATTCGTTGTAATTGGGCTACAAAAGGGGCTAATGTCAATGATGAGAAGCACAGTTTGGATTCGAAGACCGTTGTGGAGTTAGCTAATGGAACATCTGG TAAGATTATGAGTTTATCCTACTGAAAGTTTCTAACTAGCTTCATCATCTTTTTTCTTTATTTCATTTATTTATCTATTCTTTTTGTGGTTTGGTATTGT TTTTAGAAATTATTGAGTCATTGTTTTCATTGAATGGCAGCTATGACATTTGTATCAATTTCTAATGGATGTTAATGATTCATCGTTTTTAAACATTTTT GCTATTAGACATGAAAGTTCATTTCAAATAAATTTTGCCAGGACACTTCCGAATATTGCTTTTCAAGCCGTGATATTGTAGTTTGGTTTATTTTCTGTAT GTGCATCATGGCTGATATTTTTCTAGTTCTTATTTTTTTGCCCATGTATGGATATTTATCAAGCGGTCATTGTGGCCTGATTGTAGATTTGTTTGGCCAA TAATCTATACTTCATGGTTAGCTAGTTTTTTAATTGCAGAAGGCAAGGAACTAACCAATGATGATGCTCCAGAGAAGAATCTTCAATATACCACTGTTTA TGTTGGCAATCTTGCTCCAGAGGTTACTTCTGTTGATCTTCACCATCATTTTCATGCCCTTGGTGCTGGGACTATCGGAGATGTTAGGGTGCAACGAGGT AAAGGTTTCGGGTTTGTGAGATACAGTACACATGCTGAAGCAGCTCTTGCTATACAGATGGGTAATGCTCGAATTCTATTTGGCAAACCTGTCAAGGTAC ATTGCTGTTGCGAGATATCTGTTGATAATATTACTATTTTTTATGTCCTATTGTTATAGCTGTGTATAATTTTTGGCTTTTTGTTCAGGGGTGATTTCAT GACATATTTCTTGGGTACAGTAGAAAATGTTTTTTCTAACCATTGCTCTAAGGATTATGTTAAGAAAAAAAGGACTGCTTTCTGAGAAAATTACATACAT AACTCTTGAATCCTTTAAATAACCACTTCAATGCCTCTTTCCAATAAAACCATTTTGTTCCTTAACCATGGCAATGGTTAGCAAAACCATTACAAAAAAT GTGCTGTCCTCATATTTCTGCCTTGTGTCGAAAGAGTTCATGAAATTGCAATTATCTGTCATATGGCCTAATATTTTTGAAGTAAAATGCCAATCATGTT CTTGTCCTCCTTTATTTTTCACAGGCAGTTAAATTGGAATTATCTTTTTTAAGAAAAGTAAAATGCCAATGAAGCATATATTTGAGCTTTCATATTCCTA TGGCTCTTGGAAATGCATCTAATCTTGTTAGTTGACATGTTGCAGTGTTCATGGGGTAGCAAGCCTACTCCTCCGGGTATAGCCTCAGCTCCTCTTCCCC TACCTACTGCTGCTGCTGCTTCTACTCATGTGCCAGGGTTTTCACTTGCCGAACTTGCAGCATATGAACGCCAAATGGCTTTGAGCAAAATGGGAGGTGT ACATGCCCTTTTGCATGCGCAGGGTCAGCATGCCCTGAAGCAAGCAGCCATGGGAATGGGTGCTCCCGGGGTTGGTTATGATGCAAGATTCCAGGGTGTT GCAACTTCCCAGCACCCAATGTACTATCAGTAAAATATGTTGTGCAATTCCCTACCTTAAATATCCCTTCCCTCCTCTCCCTGTTTTGATCTTCATTCTC TCCTTTCCTAACATTGCTCCCTTTTTGGGTTTGTTTATGTATTACTATAATCATTGTCTGTTGTGTGAAAGCTGTAGGAGCACTGTCAATAATGTTTTTT TCTCCTGTCTTCCTTTTTGTGTGTTGAAAAATGAAGCCATTAGCCTGTTGCAAGTGTAGACACATATAGTTTGCATTTAGTACATTTTTCAGGCTTGTTT ACATATATCATGGTTTTGTCTTGGGATTTTCACATTCATGTGTGTTTTTTTAAAGTCATTCTTAAGTCTAACCCTTATGTTAGATACTTAGAGTTGTCAC TTCAGGAGAACTTCACCTGATCACTAATGCGCACTGACTGTCAGGCTCATCTTATTATGCCCAAGCATGATAGAAAAACTCAAGCATGCGGCTAAGAATA CCACTCAGCTTGTAACCCAAGCATGATAACAACAATGTATGCAAAGCTTATAGAAAAACTTGTAAAAGTAATGTTGCTCTATCTGGATATATGAATATGA GAGCAAAAATACAATTTGCTATTGGGGCATATACCCTCGAATAATAAAAAGGATTCCCAAGACCCAAAGCATGAAGTAACTGCGAACATAATACGATTCT GTTTAAAGACCCTACCTTTGTTGATGACTATTTTCTTATTTTTTCTTTCTCTTTGATA BLAST |
| Tissue | flowers |
| Gene name | LI_gene_75185; |
| Additional information | details; |
| FPAB | abscising flower pedicels |
| FPNAB | non-abscising flower pedicels |
| LF1 | lower flowers stage 1 |
| LF2 | lower flowers stage 2 |
| LF3 | lower flowers stage 3 |
| LF4 | lower flowers stage 4 |
| UF1 | upper flowers stage 1 |
| UF2 | upper flowers stage 2 |
| UF3 | upper flowers stage 3 |
| UF4 | upper flowers stage 4 |
Annotations of Ll_transcript_120936
| Blastp | Oligouridylate-binding protein 1 from Nicotiana with 85.58% of identity |
|---|---|
| Blastx | Oligouridylate-binding protein 1 from Nicotiana with 85.58% of identity |
| Eggnog | - |
| Kegg | - |
| CantataDB | - |
| Mirbase | - |
| Ncbi protein | Link to NCBI protein (XP_019443470.1) |
| Pfam | RNA recognition motif. (a.k.a. RRM, RBD, or RNP domain) (PF00076.21) |
| Rfam | - |
| GO | Links to GO: General; Genes and gene products; Annotations; Ontology; Links to GO: General; Genes and gene products; Annotations; Ontology; |