Id Trinity | FTRINITY_DN58353_c2_g1_i4 |
---|---|
Name Transcript | Ll_transcript_212010 |
Sequence | AAGAAGAGCTTTGGATAGAGTCTAGAATGATCCAATAAAATAGAGAGAAAATAGTAAAGACGGAAATGACGGAGGTGGGACCCGCTTCAATTGACCCCAC TCTTCTCTCGTTCTTATCCATTTCCACTCTCTCAACCCTTCCTTCTGCCACGTGTCACTCATCCGCTGGCGTCTTCTTTCCACTTTCTTATTCTTCCTTC CTTCTCCTTCTTCTCCTTCTTCCTTCACTCTCCTCAACACAACCCTTCATTCCATTCCACGCTTTTTGCGCTCTCTCACTTTCTCTCTCTATCTCTCTCA CTTTCTCTCTCTAAAACATGCTTCGTTAATGGAGTTCTCTTTCTCCACTCATGCTTTACGATTTTCCGAAGTTCGCTCGAACAATGTTTTGCTCTAAAAT GGGAACTTGACTTTCTTTGTAGCATTCCATGCATTTATGAAAAAAGCGTGTAAATAGTTTAAGTGATGGGGGGTATTTGTTCTAGAAAGAGAGATCAACA AGTTATTGAAGACGATTTTCGCAGAGGAGTGTTCGGAAGATATTGTAGAAATGCTAGCACAAAATGGTTAGGAGCTAGAAGTTTACGTTCCAAGGCAAAT CATTGCCCTGGAGGGGGAAGCATCCCCTCCCTCATGGAGTTGTGCATATATAAGATACGCGAGGATTTTAGTAAGTACAACTCCTTTTCAATTCTTCCGC GGGACATAAGCCAGCAAATCTTCAATGAATTGGTGGATTCTCATTGCTTAACGGAAGCATCTCTTGAAGCTTTTCGAGATTGTGCTCTTCAGGATGTTTA CTTGGGTGAATATCCTGGAGTCGATGATGGTTGGATGGATGTCATATCTTCGCAAGGATCATCTTTACTTGCGGTTGACCTTTCTGATTCTCATGTGACA GATAATGGTTTGCGTCTTCTAAAAGTTTGCTCAAATCTCCAGGCATTAACTCTCAATTACTGTGATCAATTTTCGGAACATTGGCTCAAACACATTAGTG GTCTTTCAAACTTGACTTCCTTGAGTATCAGGAAGAGCAGCTCTGTGACACCTGATGGAATGCGTGCTTTCTCCAGCTTAGTTAACTTGGAGAAGTTGGA CCTTGAGAGGTGTTCAGAGATTCATGGTGGATTCGTTCATCTTAAAGGTTTGAAAAAGCTTCAATCTCTTAATATTGGATGCTGTAAATGTGTTATGGAT TCAGACATGAAGGCTATCTCAGGGCTTATAAATCTAAAGGAATTACAAATCTCCAACAGCAGTGTTACTGATCTTGGGATTACTTATTTAAGAGGTTTGC AGAATCTTACCACATTAAATGTTGAAGGATGCAGTATTACTGCTGCAAGTGTAGAGTCAATTTCTGCCTTAGTTGCCTTGGCATACTTAAACCTCAACAG ATGTGGCCTTTCTGATGATGGATTTGAGAAGTTTTCTGATCTTAAAAGTCTGAAGAGGTTAAGTATGGCATTTAACAAGATCACGGACGCGTGTTTAGTT CATCTGAAAGGCTTGGCAAATCTGGAGTATTTAAATCTGGATTCCTGCAAGATAGGCGATGACGGGCTTGCTAACTTAACAGGCCTCACTCTCTTGAAAA GTCTAGTGTTGTCTGATACTGAAGTTGGGAACAGGGGGCTTCGTTCTATATCAGGTTGGAGGAGACAATCCTATGTACAGTTATCAAATAAGAATTTAAA CTCATTATTAGTTTGTGAATTTATTGGCAGGCAAGAATTCAAATCAGATTATTGATATATTTCTAAATTCATTGTTGTATCCCCTTTCAAAAAAAATTCG TTGTTGTATGCTTCACTACTACATAAATACATAATTATTAAAGTTGTAGTACTAAGCTATGGCAATTAGGTATTCTATATTTCATTTTCATGTAAACACC CTCTTTGCTTGCTTGCTGGGAAAGGCTGTGTGCTTTAATATACAGTCATCATCAAATTTGAGGCCCAGTCTTGGAATGTGATTGTAGACTGTTGTATAAT ACGTTGGAAGGTAAGTTCAGAAAGCCCATTGAGTCACCTAAATACAACTTATGCATTTTTTAAATAAAAAATTGTTCCTCTCTGTTTTGCAATTCTCTCC CAGCAGTGCTGAGATTTGGTTGCTGCCTCATTTTATTGAATAATGAATCAATGTATCTAGCTGTTATGGTTTTACAATTTCTTTCCTGAATCACTCTATC TGTGAATATTGTAGATACATAACACTCTACATACAAACTCAGACTATATGTATCTATCCGATTCCGTCTTGTTAGATATCATTAGTACAGAGCTAAACTG CATTTGTTGATTATACGGTTCTTGGTTTTGTCCAGGTTTAAACAAACTGGAAGATTTAAATCTGTCATTTACCTTAGTAACTGATGGTGGCCTTAAAAGA CTGTCAGGATTGACAAATCTCAAATCACTCAATCTGGATGCCCGGCAGATTACTGATGCTGGACTTGCAAATCTTATAAGTAAGCATTTCCTTGTGCAAT CATATATTGCCATGTGTTTCTGTTATGTGGATTCAGCTGGGGTTGTTTTTAATCAGTGCTTTTGTTGTCTGAATTATGAAACGTTTTATATATTGAGAGA GAGGATATATAGAGGGTGCTGTGTTGCGGTGAATAAGCAACAATTACAACCAGATCTTGGACTGGATTTATGATCAATTGTTTTTCTATTTTATTTTGTA TAATCCAATTTAATTTATTATTCAACTCTGTTACCCAAGAATCTAAGATCCAATTATGATATTCTATTTTTATAAACAAGTAGTAGATGGTTAGAGAACC ATGCTTCCAAGGTTCCTGGTCTGTTTTTACCCCTTTGGATGATTTCATCTGTAATTAGTCATTTTAATGCTCCTTTTTCTTCCGTCTTCTCCATTTTTAT AACCATTTAGGAAGTTTGAAGAAATACATGCAAAAATGTAGCAGCTATATTTCACTTTGCCTTCAAACCTATATTGATGGCAATCTTTTCCATTGCATTT TTTCACATGTTTTTTAGAAACAGGCAGGTTATTGTACTGCAACAATATCTTTGGTTTATTAGGACTGGTTCAAATATTTATTTGAATGAAGGTACTGAAT TGGCACAACTCTCTATATATAGTGAATTACACTCAAAACTGTACCAAACCGACCATATAATGTCTACCCTATAAGCTGATCTGGGTCATGTCCTAATGAG GTGCCTGCTGTAAGATATGTTTCTTTTTTTAACCGTTTCATTGTCCATATTAATATGTAATTAACTTCTGTGCCAGTGATGCTTAATTTTGCTTCTTTCA ATAGCTTCAAATCTAGCTTCCTGATTGGTGTGCCTTGCATAGGTTTGAGTGGCTTGATAAAGTTGGATCTTTTTGGAGCACACATTTCTGACTCTGGAAC TACATATTTACGGTGTATGTAGATTCTAACCTGATTTTAACCATGATGAATTCCATTTATTCTTTTTTGTTGTGACTAACAGTAGATTTTTCAAGCATAT CTGATTGCAAGTTGCAACTTGCACTCATGTTATTTGCAAGATAAAAATGGGCAGTCTGCACTTGAAATGAGAATGCATGAATAATGATGAAGATCTAAGC ATTTCTCCATGGCATTATATATTTGAGGATATTTGATGTTTATCATAAGGATATTAGCCTGAGACTTTGATTTTGGTATGAAAATGTTATTCATTCAAGA GATTAAATGTGTCTACATAGTGTTGTGTTTCTGTTCTTTATTATATTATCATATAAAATTCCTAAAATTGCTGAAATCTGCACTGATAAGTCTTTGCCAA CTAAACAAAGTGGTGTGCCAAGCGAAACCTTCTTCTACATTTGGTTTCTGTTATAATGTTTTCCATCATGTTTATAAATTTAATATTGAAAATTTTGCTG GTCTTAGAGACTTAGACTATGTTGATCATCTTATCTTTCATGTTCCCTCTAAATTGATGTAATACCAGTGGAAACTCTTGGACGTGTTATCAAGTGTGAT TAACCCACTTAACTTACTGAAATCAGCATTTTTTTATTCTGGATATAATAAATTCATATTTCTCTGTGCCTACACTTGAGAACAAACAGTTCAATGGCCT AATAGTAATGGACCTTGAAATCCCATATTCCCATCTAAAGCCAGCTTACTTTTGATTAATGTACTCTTCGTTTATTATACAAAATGAGTGCTGATTGACA TAATGGGAAAATATAGATCTAGATAACCATGTGCATATATTTATCTTGTTGGCTGAAATGTTATTTCCTCTATGTTTAATGCTGTAGCTTTCAAGAACCT TCAATCCCTTGAAATATGTGGTGGAGGATTAACTGATGCTGGTGTAAAAAATATCAGCGACATTGTCTCCCTTACACAACTAAACCTGTCCCAGAATTGC AACTTAACAGATAAAACTTTGGAACTGATATCAGGTATTTCTGCTTGTCTTTATTACTTTGTATCTTCCTTGCTACTGCTTTTCAACAATATTGATCTGC TCAGTTTGGCATAAATTGAATGACTAGTCAATAACCTCTTGCAATTTCAAGTTAGTTGTAATTAATCACTAACTTCTAGTCAGTATAAGAACATGACATC TCATATTCTATTTTTGTGCAAAAGGAGGGAAATTTTTTATGTAGAGTAGGGCACTGTAGAAACATGTTGTTAACCAAGTTGGATAATCAGAATTTAGATC TGAAAAAAGAAAGATAGAGATGGGGAGTATCATTTTGTTTGTATTTGTTTCTATTTCCTCTCCTTGCCTCGTAGGTTGATAAGATGAAATGTTGTTCTGA TTTTGTTATCAGATCTTTTATATATCTTTATCTGATTATAGGAATGACTGCATTGAGGTCACTAAACGTTTCGAATTCCCGTATAACCAACCGGGGACTT CAGTATTTGAAGCCTTTAAAGAATTTACATAGTCTCTCCTTGGAGTCTTGCAAGGTTACTGCATCTGAAATCAAGAAGCTTCAGTCTGCTGAACTTGCCA ATTTGATAAGCTTTCGGCCAGAATAGATCTGGAGGATCTGAGAATTCTGTTATCAGCCTGGTGAACAATCTCTGTGCATATGTATATAGCTACTTATGAA TGACCATTATATAAAAATGTACATACAATGTAATGCATGCAGAAAAATGTAATTATGCTTTGTTTTGCATTACCCTTTCCAATTCCCAGTGTTGGGCTAT GCACTTCAGTCAAACCCATATATATATATATATATA BLAST |
Tissue | flowers |
Gene name | LI_gene_76347; |
Additional information | details; |
FPAB | abscising flower pedicels |
FPNAB | non-abscising flower pedicels |
LF1 | lower flowers stage 1 |
LF2 | lower flowers stage 2 |
LF3 | lower flowers stage 3 |
LF4 | lower flowers stage 4 |
UF1 | upper flowers stage 1 |
UF2 | upper flowers stage 2 |
UF3 | upper flowers stage 3 |
UF4 | upper flowers stage 4 |
Annotations of Ll_transcript_212010
Blastp | F-box/LRR-repeat protein 14 from Mus with 31.63% of identity |
---|---|
Blastx | F-box/LRR-repeat protein 14 from Mus with 31.63% of identity |
Eggnog | protein ubiquitination involved in ubiquitin-dependent protein catabolic process(ENOG410YK3H) |
Kegg | Link to kegg annotations (101358) |
CantataDB | Link to cantataDB annotations (CNT0000802) |
Mirbase | - |
Ncbi protein | Link to NCBI protein (XP_019453071.1) |
Pfam | Leucine Rich repeat (PF13516.5) |
Rfam | - |
GO | Links to GO: General; Genes and gene products; Annotations; Ontology; Links to GO: General; Genes and gene products; Annotations; Ontology; |