| Id Trinity | FTRINITY_DN58353_c2_g1_i6 |
|---|---|
| Name Transcript | Ll_transcript_212012 |
| Sequence | AAGAAGAGCTTTGGATAGAGTCTAGAATGATCCAATAAAATAGAGAGAAAATAGTAAAGACGGAAATGACGGAGGTGGGACCCGCTTCAATTGACCCCAC TCTTCTCTCGTTCTTATCCATTTCCACTCTCTCAACCCTTCCTTCTGCCACGTGTCACTCATCCGCTGGCGTCTTCTTTCCACTTTCTTATTCTTCCTTC CTTCTCCTTCTTCTCCTTCTTCCTTCACTCTCCTCAACACAACCCTTCATTCCATTCCACGCTTTTTGCGCTCTCTCACTTTCTCTCTCTATCTCTCTCA CTTTCTCTCTCTAAAACATGCTTCGTTAATGGAGTTCTCTTTCTCCACTCATGCTTTACGATTTTCCGAAGTTCGCTCGAACAATGTTTTGCTCTAAAAT GGGAACTTGACTTTCTTTGTAGCATTCCATGCATTTATGAAAAAAGCGTGTAAATAGTTTAAGTGATGGGGGGTATTTGTTCTAGAAAGAGAGATCAACA AGTTATTGAAGACGATTTTCGCAGAGGAGTGTTCGGAAGATATTGTAGAAATGCTAGCACAAAATGGTTAGGAGCTAGAAGTTTACGTTCCAAGGCAAAT CATTGCCCTGGAGGGGGAAGCATCCCCTCCCTCATGGAGTTGTGCATATATAAGATACGCGAGGATTTTAGTAAGTACAACTCCTTTTCAATTCTTCCGC GGGACATAAGCCAGCAAATCTTCAATGAATTGGTGGATTCTCATTGCTTAACGGAAGCATCTCTTGAAGCTTTTCGAGATTGTGCTCTTCAGGATGTTTA CTTGGGTGAATATCCTGGAGTCGATGATGGTTGGATGGATGTCATATCTTCGCAAGGATCATCTTTACTTGCGGTTGACCTTTCTGATTCTCATGTGACA GATAATGGTTTGCGTCTTCTAAAAGTTTGCTCAAATCTCCAGGCATTAACTCTCAATTACTGTGATCAATTTTCGGAACATTGGCTCAAACACATTAGTG GTCTTTCAAACTTGACTTCCTTGAGTATCAGGAAGAGCAGCTCTGTGACACCTGATGGAATGCGTGCTTTCTCCAGCTTAGTTAACTTGGAGAAGTTGGA CCTTGAGAGGTGTTCAGAGATTCATGGTGGATTCGTTCATCTTAAAGGTTTGAAAAAGCTTCAATCTCTTAATATTGGATGCTGTAAATGTGTTATGGAT TCAGACATGAAGGCTATCTCAGGGCTTATAAATCTAAAGGAATTACAAATCTCCAACAGCAGTGTTACTGATCTTGGGATTACTTATTTAAGAGGTTTGC AGAATCTTACCACATTAAATGTTGAAGGATGCAGTATTACTGCTGCAAGTGTAGAGTCAATTTCTGCCTTAGTTGCCTTGGCATACTTAAACCTCAACAG ATGTGGCCTTTCTGATGATGGATTTGAGAAGTTTTCTGATCTTAAAAGTCTGAAGAGGTTAAGTATGGCATTTAACAAGATCACGGACGCGTGTTTAGTT CATCTGAAAGGTGCTTCAAATATCTCTACCTCTTATAAGAGTGATTATCTTTTCCGAATGTGGCTTCCCAATGTTGGAATGACACTTGATTTATACTGTT CAAGTTATTATCCCCTTTTCAGATGTGAAACAACATTTAAGATGGATCTTTCCTTTTTGCCTATGTCTTACCGTGCAATAATTTTATAATAACATTCTAA CTAGTCTTGTTCACGATTCTCTTCTATCTATAAAAAATGCTTTCAGCAAATGACAAAAGGGAAAGGTGAAAATAAAGTTTGTTACAAAATTAAACAAAAG CATGAGGACCCTTATAAATTATTAGGCTGTCCAATTATAAGCTTTATATTTCTCTGAAGACTTGCCCATTTGGTATGTACAGCTTGCTGACCCTTCACTT TCTCAAGTATTACCGGGTTCAAACTCCACTTGTTGGATCATGGATGTTCATGTGTAATTAACTAACGTTGTGCTTGTAACTTGTTTATCAATTTTTGAAT TGTCCTTTATATCCTTCATTTGTTTCTTTTCGATAGGCTTGGCAAATCTGGAGTATTTAAATCTGGATTCCTGCAAGATAGGCGATGACGGGCTTGCTAA CTTAACAGGTTTACAATTATATTTCATATTATTCCTTTTCTTAGATTTGAATGCTATTTTGTCTGAAGATTTTCATAGTCACTTATACTTTTCCAATGTT CTCTTCATCTGTGCTTGGGGATTTGTGGAACAAGGCTCTATAGTCTGATGCCATGAGTTATATTTTGTTCCATAAAATTAGGCTTCAACTTATAAGCGTA TAATTCAGGCTTTGCTATTAAACCCAATCGAGCAGTACTGAAATAATTAAATGTCAATACAATGGCATCCCATCGAGGGCTGAATGCACAAACAATTCTG AAAAGACGATAAACTGAAACGGAAAAGTAGAGAACATGAGAAGCATAAATTCATGGATATGAAATAGAGCCACATTGAACCTGGCATAATCCAACTGGAA AACATGGTTCTAATCCCTATTAATTGAATCATCCGAGGAAATCAATCAAGCATTTTGCCTTGACTTAGTGTTCAGAGTTAGATATACACCATGCTTGGTC TAGCAGTTTGGTGTTTTGTCCTTAATTTATTTAATTTGCTCTATTACAATGTTCTTTCTCTGGGAAAAAGGTTCTTATTCTTATGAAAGATATTTTGGAT TTGAAGTATCACCTGTAGTATGAATTGATAACTATTTGTTCTTTCAGGCCTCACTCTCTTGAAAAGTCTAGTGTTGTCTGATACTGAAGTTGGGAACAGG GGGCTTCGTTCTATATCAGGTTGGAGGAGACAATCCTATGTACAGTTATCAAATAAGAATTTAAACTCATTATTAGTTTGTGAATTTATTGGCAGGCAAG AATTCAAATCAGATTATTGATATATTTCTAAATTCATTGTTGTATCCCCTTTCAAAAAAAATTCGTTGTTGTATGCTTCACTACTACATAAATACATAAT TATTAAAGTTGTAGTACTAAGCTATGGCAATTAGGTATTCTATATTTCATTTTCATGTAAACACCCTCTTTGCTTGCTTGCTGGGAAAGGCTGTGTGCTT TAATATACAGTCATCATCAAATTTGAGGCCCAGTCTTGGAATGTGATTGTAGACTGTTGTATAATACGTTGGAAGGTAAGTTCAGAAAGCCCATTGAGTC ACCTAAATACAACTTATGCATTTTTTAAATAAAAAATTGTTCCTCTCTGTTTTGCAATTCTCTCCCAGCAGTGCTGAGATTTGGTTGCTGCCTCATTTTA TTGAATAATGAATCAATGTATCTAGCTGTTATGGTTTTACAATTTCTTTCCTGAATCACTCTATCTGTGAATATTGTAGATACATAACACTCTACATACA AACTCAGACTATATGTATCTATCCGATTCCGTCTTGTTAGATATCATTAGTACAGAGCTAAACTGCATTTGTTGATTATACGGTTCTTGGTTTTGTCCAG GTTTAAACAAACTGGAAGATTTAAATCTGTCATTTACCTTAGTAACTGATGGTGGCCTTAAAAGACTGTCAGGATTGACAAATCTCAAATCACTCAATCT GGATGCCCGGCAGATTACTGATGCTGGACTTGCAAATCTTATAAGTAAGCATTTCCTTGTGCAATCATATATTGCCATGTGTTTCTGTTATGTGGATTCA GCTGGGGTTGTTTTTAATCAGTGCTTTTGTTGTCTGAATTATGAAACGTTTTATATATTGAGAGAGAGGATATATAGAGGGTGCTGTGTTGCGGTGAATA AGCAACAATTACAACCAGATCTTGGACTGGATTTATGATCAATTGTTTTTCTATTTTATTTTGTATAATCCAATTTAATTTATTATTCAACTCTGTTACC CAAGAATCTAAGATCCAATTATGATATTCTATTTTTATAAACAAGTAGTAGATGGTTAGAGAACCATGCTTCCAAGGTTCCTGGTCTGTTTTTACCCCTT TGGATGATTTCATCTGTAATTAGTCATTTTAATGCTCCTTTTTCTTCCGTCTTCTCCATTTTTATAACCATTTAGGAAGTTTGAAGAAATACATGCAAAA ATGTAGCAGCTATATTTCACTTTGCCTTCAAACCTATATTGATGGCAATCTTTTCCATTGCATTTTTTCACATGTTTTTTAGAAACAGGCAGGTTATTGT ACTGCAACAATATCTTTGGTTTATTAGGACTGGTTCAAATATTTATTTGAATGAAGGTACTGAATTGGCACAACTCTCTATATATAGTGAATTACACTCA AAACTGTACCAAACCGACCATATAATGTCTACCCTATAAGCTGATCTGGGTCATGTCCTAATGAGGTGCCTGCTGTAAGATATGTTTCTTTTTTTAACCG TTTCATTGTCCATATTAATATGTAATTAACTTCTGTGCCAGTGATGCTTAATTTTGCTTCTTTCAATAGCTTCAAATCTAGCTTCCTGATTGGTGTGCCT TGCATAGGTTTGAGTGGCTTGATAAAGTTGGATCTTTTTGGAGCACACATTTCTGACTCTGGAACTACATATTTACGGTCTTTCAAGAACCTTCAATCCC TTGAAATATGTGGTGGAGGATTAACTGATGCTGGTGTAAAAAATATCAGCGACATTGTCTCCCTTACACAACTAAACCTGTCCCAGAATTGCAACTTAAC AGATAAAACTTTGGAACTGATATCAGGAATGACTGCATTGAGGTCACTAAACGTTTCGAATTCCCGTATAACCAACCGGGGACTTCAGTATTTGAAGCCT TTAAAGAATTTACATAGTCTCTCCTTGGAGTCTTGCAAGGTTACTGCATCTGAAATCAAGAAGCTTCAGTCTGCTGAACTTGCCAATTTGATAAGCTTTC GGCCAGAATAGATCTGGAGGATCTGAGAATTCTGTTATCAGCCTGGTGAACAATCTCTGTGCATATGTATATAGCTACTTATGAATGACCATTATATAAA AATGTACATACAATGTAATGCATGCAGAAAAATGTAATTATGCTTTGTTTTGCATTACCCTTTCCAATTCCCAGTGTTGGGCTATGCACTTCAGTCAAAC CCATATATATATATATATATA BLAST |
| Tissue | flowers |
| Gene name | LI_gene_76347; |
| Additional information | details; |
| FPAB | abscising flower pedicels |
| FPNAB | non-abscising flower pedicels |
| LF1 | lower flowers stage 1 |
| LF2 | lower flowers stage 2 |
| LF3 | lower flowers stage 3 |
| LF4 | lower flowers stage 4 |
| UF1 | upper flowers stage 1 |
| UF2 | upper flowers stage 2 |
| UF3 | upper flowers stage 3 |
| UF4 | upper flowers stage 4 |
Annotations of Ll_transcript_212012
| Blastp | F-box/LRR-repeat protein 14 from Homo with 31.63% of identity |
|---|---|
| Blastx | F-box/LRR-repeat protein 14 from Mus with 31.63% of identity |
| Eggnog | protein ubiquitination involved in ubiquitin-dependent protein catabolic process(ENOG410YK3H) |
| Kegg | Link to kegg annotations (144699) |
| CantataDB | Link to cantataDB annotations (CNT0000802) |
| Mirbase | - |
| Ncbi protein | Link to NCBI protein (XP_019453071.1) |
| Pfam | Leucine Rich repeat (PF13516.5) |
| Rfam | - |
| GO | Links to GO: General; Genes and gene products; Annotations; Ontology; Links to GO: General; Genes and gene products; Annotations; Ontology; |