| Id Trinity | FTRINITY_DN58378_c1_g1_i24 |
|---|---|
| Name Transcript | Ll_transcript_211878 |
| Sequence | TCTCTTCATCTCTCTCTCTCTCTCCCAGGCATGTATTCTCTCTTTTTTTGATCACTTTTACTGACATGTCTTATGCTGGAATTTGAAAGATACCCTTTTT CTATCTTTTGTTATTTTGTTCCTTTCTTTACTCCCTACCTTCACTTCTCCATTTGGGCATGCATCTTTCATTCGAGTATCAAATAAAAATTTGATTTTTA TTCTTCTTTCACTATTTCCTATTACTCCGTCAAAGCCCCACGATCGGTTTTTGCAATGTGATTTACTGCATTTGTGTTTGCAAAAAATAAAATAAAATTG TTAATTAATTCACAATGGCTGAACCTTCCAAGGTCATTCATATTCGAAATGTGGGCCAGGAAATATCTGAAGATGATTTGCTCCAGCTATTTCAGTCTTT TGGAGTCATAACAAAGCTAGTAATGCTGCGAGCAAAAAACCAGGCTCTTATCCAAATGCAAGATGTTGCTACTGCAGTTAGTGCTTTACAATATTATGAA AATATTCAGCCAAACATAAGGGGGAGGAATGTTTATATCCAGTTTTCCTCGCATCAGGATCTAGCACCAGCAGATCAAAATCAAGGACGAGGAGACGAGC CAAACCGAATTCTCTTAGTGACAATTCATCATGTGCTATATCCTATGACAGCGGATGTGATGCATCGAGTATTTTCTCCCCATGGATCTGTGGAGAAGAT TGTAACATTTCACAAGTCAGCTGGCTGCCAGGCTCTCATACAGTATCAATCACGACAGAGTGCTGTTACTGCAAAAAACGCACTTCAGGGACGCAATGTT TATGATGGTTGCTGTCAACTGGACATTCAGTTCTCGAACCTTGATGACTTACAAGTGAACTACAATAATGACCGTACCAGGGACTTCACGAACCCTGATC TTCCTACTGAGCAGAAAGGAAGACCTTCACAACCTGATGCAGGAAACATGTATGGGTCTGCGGCCAGGACAGTTGGACTTTCGCACGCGGCCAATGCTGA TGCCATTGCAGCTGCCTTTGGGGGAAATTTGCCTCCGGGAGTAACTGGGGAAAATGACAGGTGTACAATTCTTGTCTCAAATCTGAATCCGGATAGAATA GATGAGGATAAACTGTTCAACTTGTTCTCCATTTATGGAAACATTGTAAGAATTAAACTTCTCCGAAACAAACCAGATCATTCACTTGTCCAGATGGGCG ATGGTTTCCAAGCTGAATTGGCAGTACACTTTCTTAAGGTTCATTTCACGTATACCTTGCTGACTATATATATGTATACTAGATCTTGTGATAGCCTTAC TAATGTAGAAGTTATTATCGTATATCATAGTTCGTTTGTTAAATTCATTGCATAGCCAGTCCTTAGACTGTTGTGGATAAAAGAGGAGGATTTTGCTAGA CAGTCAACAACTAATGTTAAAATTTTGTTGAACGTTCATGACATGATATGATTGTATTAATTCTTGGTTGTAACTTGTAATTAATGTGCGTATGGCTCAA GTATACTGTGAAGCAGGAGCTGTTGCATTGGTGCTTGGATGTAGTGAAAAAATGAGCAAGAATTTCCACTTCTTCATGGATGAGTGTGGGTAAAGAAGCT TGTTCATGAGAGTAGGATTCGTTTTGGAACTCACAGATAAATCTATGGAAATAATTCACACAATTATTAGGGGAGGATTATTTTTTGTGCATCCAGGAAA TTGTGGGTTTGAGAAAAGGCTAGGGATTTAGACACTTTTGTTTGCTTTGGTACATTTGCAAAGTAAGATCGAGAAATGAGATAGGCATAGTAGTAGATAA AATTTGAAAGTATAATGTAGTTGATGCTAAAAGGGTTGGGAATGTATTGTAACGTTAAAATGTGTAATGGGACAAGACACATTTGATATTATTAGTGAGT ATCCACCCAAGGTTGCAAGAGGAACTAAAGATAAAATTCTGATATTATTTAGACAGTTCGGTTAGGCTTCTAAATCGATGTTGCTAGGAAACTCAGAGAA TATGAGGAGTTGCATGAAGGGTATGGCATCATTTGCTCTATGTAACTAACTGCACCTAGTGGGAAAATGATTTTGTTGTATATGTGTGCCTAAGTATGAT CATTATATTTATTATTTTTTTATTCTTCTCATGTACAATGTCAACGGTTACAATTTGACAGTGCATGCATAATTTGCTTAGTTATCTTTTATAATCTTGA GTAGGATGAAGAAAGTTTGATAACGAGACCAATCAAGTTTCATTTTCACATGTTTTGTTCTAGTTGGAAGCTTTAAATTCAGCTTTTTGATTGGGTTTCC CTTGAGAATTTATCATGACACTAATTCTTCTGTTGATGAATGATGACACTAATAATATTAGCAAACTCACATTGAGGTGATTTATGTGCTTTTGAACTTT GGTCATCTTTAAGCATTTCTGGTTTGATATAATTGGTAATCTTTAAGCATTTCTGATTTGATGTAATTTATTTTCCATATTTTGTCCTTGTGACTTGCAA ATTAATCTGTATTTACTCTGCTCTAGTTTTAAGCTGGTCACTAAAACCATTCCAACTTTTGAGGACAGGGAGCAATGTTGTTCGGGAAG BLAST |
| Tissue | flowers |
| Gene name | LI_gene_76568; |
| Additional information | details; |
| FPAB | abscising flower pedicels |
| FPNAB | non-abscising flower pedicels |
| LF1 | lower flowers stage 1 |
| LF2 | lower flowers stage 2 |
| LF3 | lower flowers stage 3 |
| LF4 | lower flowers stage 4 |
| UF1 | upper flowers stage 1 |
| UF2 | upper flowers stage 2 |
| UF3 | upper flowers stage 3 |
| UF4 | upper flowers stage 4 |
Annotations of Ll_transcript_211878
| Blastp | Polypyrimidine tract-binding protein homolog 3 from Arabidopsis with 76.05% of identity |
|---|---|
| Blastx | Polypyrimidine tract-binding protein homolog 3 from Arabidopsis with 74.36% of identity |
| Eggnog | polypyrimidine tract binding protein(ENOG410XPMZ) |
| Kegg | Link to kegg annotations (AT1G43190) |
| CantataDB | - |
| Mirbase | - |
| Ncbi protein | Link to NCBI protein (XP_019429120.1) |
| Pfam | RNA recognition motif. (a.k.a. RRM, RBD, or RNP domain) (PF00076.21) |
| Rfam | - |
| GO | Links to GO: General; Genes and gene products; Annotations; Ontology; Links to GO: General; Genes and gene products; Annotations; Ontology; |