Id Trinity | FTRINITY_DN58494_c0_g2_i2 |
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Name Transcript | Ll_transcript_30700 |
Sequence | CAAAGGCCCAAACCCCTTGGGCAAGAAATTTTTTCACTAAACCCTGGACACCAAATTTGTCTACCTTCTCTGCTCAAGCAATTTTCCCTTATAATTTATT TTCCCTCACTTTCTCTCTGTTTTCCACCGAATAAACGCTTCCTTTGCTTCACCTCCTTCCTCTTCAAAATTTCAATCGCAATTCCAACTCCTCCATCTTC ATCATCATAGCTATGTCCATCTATATGGTTTTATCACGCGCCTCCAGGAGCGTGTGCCGAAGCTCCACGCTTCTCTCTGCTTCACTGAAATCCAAACCCT TACACGTAACTTTCTGTAATGATTTCCATTCCCTCGTTCACAAACCAGAAAACATGCTTATTCCAATTCATGCCAATTGGTTGACTCCACCAAGAAATTC ATACTCAACTGCAAGATTTCATTTTTTTTCATCTGCCTCAACTGAACCTACTAGTGATGAACATGCAAAAGCAAATGAAGAAGGTAAGGTGGCTGATCAG GCTGAACAAGACAAAGATGCAGATCAAACCAAAGAATCAGATGTAGAGAGCGAAAGTAATTTATCCAGGGATGATTTAGTAAAGCTTGTAGCTGAGAAGA GAGAACTTTTGAAGTTAAAGCACAAGGAGATTGAGAAAATGCAGGATAAAGTTCTCCGTACTTATGCAGATATGGAGAATATCATGGACAGAAGTCGACG TGAAGCTGAGAATTCAAAAAAATTTGCTATACAGAATTTTGCGAAGAGTTTGCTAGATGTTGCTGACAATTTGGGAAGAGCTTCCTCAGTTGTAAAAGAA AGTTATTCAAAAATTGAATCACCTAACGACTCTGTTGAAGCAGCGAAACTCCTGAAAACACTTTTGGAAGGTGTTGAAATGACTGACAAACAACTTGCAG AGGTACTTAAAAAGTTTGGTGTAGTAAAATTTGATCCTACAAATGAGCCATTTAATCCAAACAGACATAATGCCATGTTCCAAATACCTGATGCTTCCAA GCCTCCAGGCACTGTTGGAGCTGTTCTGAAGGCCGGATACATGCTTCACGATCGTGTTCTTCGTCCAGCGGATGTTGGTGTAACGCAAGAAGTGGAGGAC AGCAATGCAGCTGAGTGATGATGGCATTGAGAAATATGCCTGAGTAGTGTTCTTGTTGGGTACCAACCAAATTCATTCTTTGAATACTTTGGTCTGACAT TTATGAATCAACGGTTAATTTAGTTTTTCTATTTATATACTCATTGTTATACAATAAACGGAAATGATGGTATCTTATTGTTAAAGAAGAGATATAATAT CGTTATTTGTCAGTGTATTAATTTGAGAAAGTTACAACATGATAAATGAGGTTTCATTCTCCATGTATTGCTTAAAATATGAGGTGAGTTATTATTTTTA TATAGCAAATGAACGGGC BLAST |
Tissue | flowers |
Gene name | LI_gene_77525; |
Additional information | details; |
FPAB | abscising flower pedicels |
FPNAB | non-abscising flower pedicels |
LF1 | lower flowers stage 1 |
LF2 | lower flowers stage 2 |
LF3 | lower flowers stage 3 |
LF4 | lower flowers stage 4 |
UF1 | upper flowers stage 1 |
UF2 | upper flowers stage 2 |
UF3 | upper flowers stage 3 |
UF4 | upper flowers stage 4 |
Annotations of Ll_transcript_30700
Blastp | Protein GrpE from Nitrobacter with 44% of identity |
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Blastx | Protein GrpE from Nitrobacter with 45.45% of identity |
Eggnog | Participates actively in the response to hyperosmotic and heat shock by preventing the aggregation of stress-denatured proteins, in association with DnaK and GrpE. It is the nucleotide exchange factor for DnaK and may function as a thermosensor. Unfolded proteins bind initially to DnaJ(COG0576) |
Kegg | Link to kegg annotations (Nwi_0195) |
CantataDB | Link to cantataDB annotations (CNT0002993) |
Mirbase | - |
Ncbi protein | Link to NCBI protein (XP_019432928.1) |
Pfam | GrpE (PF01025.18) |
Rfam | - |
GO | Links to GO: General; Genes and gene products; Annotations; Ontology; Links to GO: General; Genes and gene products; Annotations; Ontology; |