| Id Trinity | FTRINITY_DN58536_c0_g1_i12 |
|---|---|
| Name Transcript | Ll_transcript_6865 |
| Sequence | AGCAAAGTGATTCCATGTAAAAACTTCAAAAATATCTCTTTAATTAACATGTACAAGAAAAAATAAAGTGAAAATGATAGAAAGAGAGTGAATTATTATT TTCGTGAACTTAAATAGTAAGTCCCTTGAGCTCTTTATGTAGATTTGTTCAAGTAAAGCATATCTTTTTAGCTTTTCAAAGTCTGGTCTTGAGTTTGGTT CTTCTAAAATGGGTTTGAACTTACTGGGGGCTTTGTGATTTCTCCTATGCTGAGATGGTATTATTAGATGAAGAACTATAGCTGAAAATTGCAAAATTTC TGAGCTTTTTTTCTCAAAGTGACGGCCCTCTTGTCAGCATGGTTAAGGGCAGAACATTATTGCTCTTGGTTTTTGGCTTGTGGATTTCAACTGTGAATTC TGCTGTGTCTTCAAGACCGAAGGTTGTGAAAATTGGAGCCCTTCTTACTTATAATTCTGTCATTGGAAGATCGGCTAAACCAGCAATTGTGGCCGCCGTT GAGGATGTTAATTCTAATAGGAATGTTCTCCCTGGCATTGATCTTCAAGTTATTTTACATGATACAAATTGCAGTGGTTTCCTAGGCACAGTGGAAGACT GTCGCTCATTGCTCACTAACATGAGAGTGTCTTGTTATATGAGTCTGTTGAGAATTTGAAGTGCTAGTAAGATGGAAGTCCCATGTTGGTAAAGAATGGA CAAATGGAAGGAAATATAACAGAAAAAAATCACAAACCTAATTTCAGCTTGACTCCACTCTTGTCCTAAATCTCTGCAGTTGATGAAGAATGAAGTGGTT GCTGCTGTTGGTCCACAATCTTCAGGAATAGCTCATGTCGTGTCACATGTGGCTAATGAACTACATGTACCTCTTCTATCATTTGGGGCAACTGACCCAA CTCTATCTGCTCTACAATACCCGTATTTCATCAGGACTACCCAGAGTGACTATTACCAGATGCATGCAATTGCAGATTTTATTGAGTATCACGGGTGGAG GGAGGTCATTGCCATATTTGTAGACGATGATAATGGAAGAAATGGAGTTACTGCATTAGGTGATGCACTGTCAAAGAAACGCAGCAGGATCTCTTACAAG GCTGCATTCCCTCCTGAAGCCTCGCAAAGTTATATCAGTGACTTGTTAAATGAAGTAAACTTAATGGAATCAAGGGTCTATGTTCTACATGTTAATCCTG ATTCTGGTTTGACAATCTTTTCCATTGCGAAGAAGCTACGAATGATGAGCACCGGCTATGTTTGGATTGCAACAGATTGGCTTCCTTCAATGCTGGATTC ATTAGTTCGAGCTGATACAGGCACAATGAATATTTTACAGGGGGTTGTGGCTTTCCGTCATCACATTCCTGATACTGATCTCAAGAAGAGTTTTATCACT AGGCTGAAAAACCTTAAAGACAACAACACTGAAAGCTTCAATTCTTATGCATTTTATGCATATGATTCTGTATGGTTAGCAGCTCATGCCCTTGATGTTT TTCTCAACGAAGGTGGGAATATATCTTTCTCTAGTGACCCCAGGTTGCGTGACACGAAAGGAAGTGTGCTGAATTTAGCAGCTCTTCGCACTTTTGATGG GGGTGATCAGTTTCTCCAGACAATTTTGCGAATGAACTTTACTGGTTTGAGTGGTAAAATTGAGTTTGACCATGATAAGAATTTAATTTACCCAGCATAT GATATTCTAAATATTGGTGGAACTGGATCACGTAGTATAGGTTATTGGTCTAATCACTCTGGACTGTCAGTATTAGTTCCTGAAACTTTACACATGAAAA AATCATTCAACACTTCAACAAGCAATCAAAAGCTTTACAGTGTGATATGGCCTGGAGGTGCTACAACTACACCTAAGGGATGGGTATTCCCTAACAATGG TAAGCCACTGCGAATAGCAGTGCCAAACCGAGTAAGTTATAAGGAGTTTGTTGCTAAAGACAAGAACCCTCCAGGGGTACAAGGCTTTTGCATCGATGTC TTTGAAGCAGCCTTAAAGCTGTTGCCTTATCCTGTCCCCCGACAATATATGCTATATGGAAATGGCGATAGGAATCCTAACTATAACAACCTTGTGGATC AGGTTGCACAAAATGTGAGTTTCTAACTCATATGTCAGCATTCACTATGTATAACCTAACCAGAAGTCCAGAACTGCAAGTAGCTATAATATGGATTTCA ATTGTGGATATTTTGTAAATGTAGTACCTATTTATTGACATTTAATAGAGCATCTGATTTCTATAGGTGATTGAAGAACACTTAGAAATCTGCTATTCTG TTAAAATTTGGTACGTATGTTAATTTGCTCCTTTCCTTGTTTAGAACTATGATGCAGCCGTTGGAGATGTTACAATTGTGACAAACAGGACAAGGTTTGT GGATTTTACTCAACCTTTCATGGGATCAGGGCTTGTTATTGTTGTTCCTGCCAAAAAGGGTAAGTCAAGCCCTTGGGCTTTCCTTAAGCCATTCACTGCT CAAATGTGGTGTATCACTGGTGCTTTCTCTCTTTTTGTGGGATCTGTTGTGTGGATTCTTGAGCACCGATTCAACGAAGAGTTCCGTGGTTCACCAAGAA CACAACTTATAACAGTCTTTTGGTTAGTATGTTTTGACCATTTGAAAGCCTTTTTTATATCTGATTTTTTCGAAGATGATAAATGCCGCTTTGTGATAGA CCATCGGGCCTGGTTATTGGCTGCTTGTCAATGACATTGCTTCCATTCTTTATCATAGCATATCATACACAAGAGGTGGTTGTAGGAATTCATTTTAATA TATTATAGCATGCCTTATTTTGTTTTTCCTCCTGAAAAGGCTCCATGAACCCATGTCTGAATACCCTGCCCTCAGCATGTCCACAACAAAGGGTGTTTCT AATGCAAGTGGCAGTACCAGACAACATAAGGAGGTTTTTGTCCAATACTGAAGCCAAATTAAAAATCAAATAAATTAGAGGAAAAAACTGTGCTGTTTTT TCCCTCATTTTATAGCAAATCAAATACACTTTAAGTCTTGTTTTTTACTTTAACATTATGTCAGATATTTTTGCTGAGATTAGTTCCTACTTTGCAGGTT TAGTCTCTCAACAATGATTTTCTCACACAGGGAGAACACCGTGAGTACTCTTGGAAGATTAGTGCTGATCATGTGGCTTTTTGTGGTGTTAATTATCAAT TCAAGCTACACAGCTAGCTTGACATCCATCCTCACAGTGCAGCAATTGTCATCACAAATTGAAGGAATAGACGGCTTGATTTCAAGTACTCAACCAATTG GAATTCAAGATGGGTCATTCGCACGGAAGTACCTTACCGAGGAACTCCATATATCTGAATCAAGGATAGTTACTTTGAAAAACGTGCAAGGTTATATAGA TGCCCTTGAGCGTGGACCGAAATATGGAGGGGTTGTGGCTATTGTTGATGAGCTTCTTTATATTGAGACCTTGATGTCTAGCACTAATTGTAAGTTCAGA ACTGTTGGATAGGAATTCACTAAAAGTGGCTGGGGATTTGTAAGTATCTCGATTTACATGTTGATGGTTCAGGATTCTAAATTTCATTTTCGTAAAACAC TACACATTTGGAAGGTCTCTGTATGGAAGAAAATTAC BLAST |
| Tissue | flowers |
| Gene name | LI_gene_77888; |
| Additional information | details; |
| FPAB | abscising flower pedicels |
| FPNAB | non-abscising flower pedicels |
| LF1 | lower flowers stage 1 |
| LF2 | lower flowers stage 2 |
| LF3 | lower flowers stage 3 |
| LF4 | lower flowers stage 4 |
| UF1 | upper flowers stage 1 |
| UF2 | upper flowers stage 2 |
| UF3 | upper flowers stage 3 |
| UF4 | upper flowers stage 4 |
Annotations of Ll_transcript_6865
| Blastp | Glutamate receptor 3.4 from Arabidopsis with 65.54% of identity |
|---|---|
| Blastx | Glutamate receptor 3.4 from Arabidopsis with 54.56% of identity |
| Eggnog | PBPe(ENOG410ZZ8P) |
| Kegg | Link to kegg annotations (AT1G05200) |
| CantataDB | - |
| Mirbase | - |
| Ncbi protein | Link to NCBI protein (XP_019453770.1) |
| Pfam | Receptor family ligand binding region (PF01094.27) |
| Rfam | - |
| GO | Links to GO: General; Genes and gene products; Annotations; Ontology; |