Ll_transcript_5921

Id TrinityFTRINITY_DN58567_c1_g1_i4
Name TranscriptLl_transcript_5921
SequenceTGTTATTGCAACTCAGTGCCGTAACCTTCAAAACAGGAGAAAATATCTCACACTCTTTCTCTCTTTCACCTTTTACTCACTCACTCACTCACACTTTCAT TACCATAACCCTAAACGCACCGTTTCGCCACCATGCCTTCTCTTCCTCTTTCCAACGACGCCGTTTCCAACGACAAGAAGCTCAAGAAGGAGAAGAAAGT GAAATCCACCGACAATGTCAAGAACCTGAACGACGCCGTTTCAGATAGCAAGAAGAAGAAGAGTGGCTCCAAGGAGATCAAGAAGAAGCGGAAGAAGGTT TCATCATCTTCTGAAGAAGAAGATGATGATGATGTGAAGAGTGAGACTAGTTCTGATGTTGTTGAGGGTTTGAAAACGAAGGAGAAGAAGAAGAGTAAGA AAGCGAAGGTGGAGGTGGAAGAGGAAGAAGAGACTGAGGCTGAGGTTGAAGTTGAGAATCCTAATGCGGTTTCCAATTTTAGGATATCGGAACCGTTGAA GGCGAAGCTGAAGGAGAAGGGGATTGAAGCGTTGTTCCCGATTCAAGCTATGACCTTCGATATCATTCTCGATGGCGACGATTTGGTTGGTCGTGCTCGC ACTGGTCAGGGTAAAACTTTGGCTTTTGTGTTGCCCATATTAGAGTCTTTAACAAATGGTCCAGCAAAAGCATCAAGAAAGTTGGGCTACGGGAGGGCTC CAAGTGTCGTTGTGCTTCTACCTACTAGGGAATTGGCCAAACAGGTTCATGCTGACTTTGAAGTTTATGGTGGGTCATTGGGATTGGTTTCTTGCTGTTT ATATGGTGGAGCTCCATATCAGACTCAAGAGATGAAGCTCAAGAGGGGTGTTGATATTGTTATTGGCACACCTGGTCGCATAAAGGATCATATCGAGAGG GGAAACATTGACCTGAGCCTACTAAGGTTCCGTGTCCTTGATGAGGCTGATGAGATGCTGAGAATGGGTTTTGTTGAAGATGTTGAACTCATTTTAGGCA AAGTAGAAGATGTTAACAAAGTTCAGACACTTCTTTTCAGTGCTACATTACCAGTCTGGGTTAAGCAGATTTCTACAAGATTTTTGAAACGTGATAAAAA AACTGCTGATCTTGTCGGGAATGAGAAAATGAAGGCTAGCAACAATGTTAGACATATTGTTCTTCCATGCAATTTTTCTGCTAGGGCCCAGCTTATCCCC GACATCATTCGCTGTTATAGCAGTGGAGGCCGGACAATTATTTTTACTGAGAAAAAGGAGTCTGCTTCTGAACTTGCTGGGGTCTTGCAGGGAGCAAGAC CTCTCCATGGTGACATACAACAGTCCCAACGTGAGGTGACTTTGTCAGGTTTTAGGTCTGGAAAATTCATGACATTGGTGGCCACAAATGTGGCAGCTAG GGGTCTGGATATCAATGATGTTCAGTTAATTATCCAGTGTGAACCTCCACGGGATGTAGAAGCATACATCCATCGTTCTGGACGTACAGGAAGAGCTGGT AATACTGGAGTTGCTGTAATGCTTTATGATCCCAGAAAGTCAAGTGTATCTAGAATAGAGAGAGAATCAGGTGTCAAATTTGAACATGTATCGGCTCCTC AGTCTGATGATATTGCCAAAGCTGTTGGTGGGGAAGCTGCTGAATTAATTTTACAAGTATCTGATAGTGTGGTTCCTGCATTCACATCTGCTGCTCAGGG GCTTTTGAATAACAGCGGTTTATCAGCTGTTGAATTACTTGCAAAAGCTCTAGCCAAGGCTGTTGGTTTTACTGAGATAGTGAAAAGATCACTTCTGACT TCCATGGAGAATTATGTCACATTACAGCTTGAGATTGGAAAACCTATTTTCACCCCATCTTTTGCATTTGGAATCCTGAGGAGATTCGTGCCGGAGGAGA AGGTTAACACAGTGCAGGGTCTTACTATCACTGCAGATGGAAATGGTGCTGTTTTTGATGTACCAGCAAAAGAGTTAGATGCATTTATTACTGGTCAGCA AAATGCTGCTAATGTAAGTCTGGAGGTGGTGAAAGCATTGCCGCAGTTGCAAGAAAGAGACCAGTCAAAAGTGAGCAGATATGGTGGTGGAGGTCGTGGG TTTGGTGGAAATAGATTTGGTGGAAGAGGAGGTGGCAGGAATAGTAGATTTTCAGGTGGTTACGGTGGTGGTAGAGGCGGAAAGAGATGGTAAAGGAGTT AGTGAGATGATGGTTCATGAGCCCCATATCCGTGAGCTTAATTTTTAACCTATAGTTTGTTATTTGTGTTGAACTATTATTAATCCCATTTATCTCAATT TTTACATGAACATGTAAGAATTGAATTTCTATAGGATTGACAATGATAATGAAGAAAAGAGAAATATTTATTTTGCCATTTGTTTCACCGCCAAGTTTCT ATACTAACATGGTTTGTTATAATTCCTC BLAST
Tissueflowers
Gene nameLI_gene_78145; 
Additional informationdetails; 

Expression of Ll_transcript_5921

Labels

FPAB abscising flower pedicels
FPNAB    non-abscising flower pedicels
LF1 lower flowers stage 1
LF2 lower flowers stage 2
LF3 lower flowers stage 3
LF4 lower flowers stage 4
UF1 upper flowers stage 1
UF2 upper flowers stage 2
UF3 upper flowers stage 3
UF4 upper flowers stage 4

Annotations of Ll_transcript_5921

BlastpDEAD-box ATP-dependent RNA helicase 7 from Arabidopsis with 76.16% of identity
BlastxDEAD-box ATP-dependent RNA helicase 7 from Arabidopsis with 76.31% of identity
Eggnogpurine NTP-dependent helicase activity(COG0513)
KeggLink to kegg annotations (AT5G62190)
CantataDBLink to cantataDB annotations (CNT0002891)
Mirbase-
Ncbi proteinLink to NCBI protein (XP_019449411.1)
PfamDEAD/DEAH box helicase (PF00270.28)
Rfam-
GOLinks to GO: General; Genes and gene products; Annotations; Ontology;
Links to GO: General; Genes and gene products; Annotations; Ontology;