Ll_transcript_178341

Id TrinityFTRINITY_DN58628_c0_g1_i5
Name TranscriptLl_transcript_178341
SequenceCACGATTCTACATTATCAAAACTCTCTCATACCCTCAACCCACAAAACCCTTTCACTTTCATCCTCTTCCTCACCTCAACCCTCTCATACATATTTTACA GAAAAACCCCAAATTCAAAAAAAATACACAAAATGGCCGAACCAGACTCGACAAGGTCAGTGGCGAGAATCCGACTTGGAACGACAAGTTCCTTTTCCGC GTCTCGCCGGATTTCCTTGTCTCCGAAACCTCCGGCACATTCCACGATGACCTCATCGGAACTATTCGATTCCTCATCAGCAACATCCTCGACGGTGACT CGGTGAGAGTAACACTGTGCTTCTCAGCCGTACAGTTTAGTCGGTCGTCGGGAAGGTTCCATGGTGTAATGAACATCGGAGCTATGCTGATCGACGGTTC AGAGATTCACGTGTTGAAGAAGAGATATCAGCGATAGGTTATCGTGATCTTATGGGAGAGAAGATTCAACTGAATCGGAAAAAAACCGAATCAGAGTTAG AAGAGCGAAAGCTGAAGAGTTCAAATTCAAATTCAAGCGAGAATAATTCATATGAGGGTTCTTTCACGGGGCCATTAACGGATGGATCAGAATCGACTGC AACGCCATCGTCTTCAACGTCTTCTCCTAGAACAGTGACGATGGCGTTAACAGAATGGAACGGCGTTAGGGAATTGGCGAGAGCGTGGAACAAAGGGTTA ACGACGTCAGCGTTCTTGTGTTGTTTAGTGGCTAACAGAAACAGAAACAGAACCATTCATCTAAGTCCAAGTGAACGATGAAAAATAATGAATGAAAGGG TTTCAATGAACGAGAGCGTCTCTTCCTCACACGCTCTGTGGACGTGATATTCTTGGTGCTGCAAAAACTGGTTCTGGAAAAACTCTTGCTTTCATTATCC CTGTGTTAGAGAAGCTATACAAAGAGAGATGGGGACCTGAAGATGGGGTTGGCAGCATCATCATATCTCCTACCAGGGAATGGAATTAGCTGGTCAGTTG TTTGATATGCTGAAGGCTGTTGGGAAGCACCATAATTTTTGTGTTGGACTCCTCATTGGTGGTCGCAAGGATGTTGACGTGGAGAAGGAACGTGTTAATG AGCTTAACATATTGATCTGCACGCCCGGTCGCCTTCTACAGCACATGGATGAAACTCCCAATTTTGATTGTTCTCAGATGCAGGTTTTGGTGTTACATGA GGCTGATCGTATTCTTGAAAGTGGATTCAAGAGGGAACTAAATGCAATCATCTCACAACTACCAAAGCGCAGGCAAACCTTGCTTTTCTCAGCAACTCAA ACTAAATCAGTTCAAGATCTTGCGAGGCTTAGTTTGAAGGACCCGAAGTATCTGAGTGTTCACAAAGAGTCTGTGACTACCACTCCTACTCTCTTGAAGC AAATTGTGATGGTTGTTCCCTTGGATCAAAAGTTAGATATGCTGTGGAGTTTCATAAAGACACATCTCCAGTAAAAAATACTTGTCTTTCTTTCAAGCTG CAAGCAGTTAGCTTTGCTGCATCTCCATGAGGGAGAGCGGCGTTGCAACTGGAGGATGTAGATTTAAAGACGATGGAGGGAGTAAACGCGATAGGGAGCT TCGAGGAGATGTGAATAAAAGCGATATGATTGCACTCACTATATGCCAGATTGTTGATACCTCCATTTGAGGGTTGTTGATTTTGGGCATTCCTGGTGGC AATAGAAATACTTAAATTGACAATTGACTTCCTTTCTTGTTCAATATGATATATGATATGATTTCTACAATTATTCACAATATTGAACACTGTGAAGACC AACCAACTAGTGAGTATAAGAAACATATGTGGAGAATATCAGGTTGATTAAGAAGAAAAATATTTGGAGGAGTCATAATATTCACAATATAGTGGAGTCA AATTTTGGGCTGTCGAAAATATTTGGTCAGACATACCTATGTCAGCATCATTTTATTAGAGATACACATAAACAACCATGAAAGATGAACTTAGTTATTC GATAATATGAATTTTGTTTTAATATGATCTTGTACACAACTGT BLAST
Tissueflowers
Gene nameLI_gene_78740; 
Additional informationdetails; 

Expression of Ll_transcript_178341

Labels

FPAB abscising flower pedicels
FPNAB    non-abscising flower pedicels
LF1 lower flowers stage 1
LF2 lower flowers stage 2
LF3 lower flowers stage 3
LF4 lower flowers stage 4
UF1 upper flowers stage 1
UF2 upper flowers stage 2
UF3 upper flowers stage 3
UF4 upper flowers stage 4

Annotations of Ll_transcript_178341

BlastpDEAD-box ATP-dependent RNA helicase 32 from Arabidopsis with 72.22% of identity
BlastxDEAD-box ATP-dependent RNA helicase 32 from Arabidopsis with 70% of identity
Eggnogpurine NTP-dependent helicase activity(COG0513)
KeggLink to kegg annotations (AT5G54910)
CantataDB-
Mirbase-
Ncbi proteinLink to NCBI protein (XP_019417514.1)
PfamDEAD/DEAH box helicase (PF00270.28)
Rfam-
GOLinks to GO: General; Genes and gene products; Annotations; Ontology;
Links to GO: General; Genes and gene products; Annotations; Ontology;