Id Trinity | FTRINITY_DN58686_c0_g1_i7 |
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Name Transcript | Ll_transcript_177929 |
Sequence | GTCCACTCCACAATCAAACCCTGTCTATCTCTGTTCACACTCTAATCTTCATTTCAATTCAATTCTCTCGTTTCCAAAACCACAATCATCAACATCAATG TTGCAGTTACAATTGGAACAGTGATGCTAGGGTTCCATCACCGATCATGGTATTCAAAGGCAGATTCTTCTCTTCCAAAAAATCCGATTCTTCTAATTCA AGTCCCGATGCTTCCTCCACCAACAATAGTCCCCAATCATTCACCTCCAATTCCCCTTCCACATCCCACAACAACAACGATTCCAATTCCCCTCCCGCTA AACCCTCACCAACCGCCGCCGCAGGTGCCGCCTCGTCGCGGAGGACGCTACGGAAGGATGTGATCAAAGGTAAAGAAACTCTAAATCAGGTGATGGAGTC TCGTTCGAAGAAGTTAACGGCGACGGTGACGGCGGGAGGTAAGGAATCATCGCCGTCGTTGCCATTGTCTCCGATTCTGGCGTCGTCGCTGGGGTTGAAT AAGATAAAGACGAGATCAGGACCGTTGCCGCGGGAGGGTTTTTTCGGGTTTAGGAGCGATGACAAGCTCGGTGCAAGTAACCTTTCTAGGAATGGTGGAA AGAAGAAGGAGAACAGAGTAGGGTTTCAGGAGAGTGGAGCTTCGGTTGATAACGGTGATCACATGCCCACGGGGAGTGTACATTTCAGGGAACATATTGA ATCATCGCCACAGGGAGGCGAATTATACGCGGCGGCTGAAGCAGGGAAGCAGGCATCATCAATGGCTCAGAATGGAGGCTTAGGAAGTGCAGATGTTTGC ACTCCAGAGACAACATATGATTATGAAAACCCGAAGGAGTCTGAATCTCCTCGTTTTCAAGCTATATTACGTGTCACAAGTGCACCTAGGAAGAGGTTTC CTGCAGACATCAAGAGTTTTTCCCATGAGTTGAATTCAAAAGGTGTCCGACCTTTTCCTTTTTGGAAGCCTCGAGGGCTAAATAACCTGGAGGAGATATT GGTTGTTATCAAGGCAAAATTTGATAAAGCAAAGGAAGAGGTTAACTCTGACCTGGCTGTTTTTGCAGCAGACCTGGTTGGAATTCTTGAAAAAAATGCA GATATTCATCCTGACTGGCAAGAGACAATTGAAGACTTGCTAATTTTGGCTAGGAGGTGTTCTATGACTTCATCTGGGGAATTTTGGCTACAGTGTGAAG GCATAGTTCAGGATTTGGATGATAGGCGTCAAGAGCATCCTCCAGGGATGCTAAAGCAGCTTCACACTCGAATGCTTTTCATTCTCACAAGGTGTACCAG ATTATTGCAGTTCCACAAGGAAAGTGGTTTGGCTGAGGATGAACATGTTTTCAATCTTCACCAATCCAGAGTGTTGCATTCTGCTGAAAGAGGTATTCCT CCTGGTTTGGGAAGGGATGCTAAAAGTTCAAGTGCTGCAAGGGCCTTGAAAACTTCAATAAAAAAAGCATATAGTCAAGACCAGAGTAGTACCTTGGGAT GGAAGAAAGATGCTGTGCAACGAAAAAAGCTATCACTTCCTGCTGCTGATGAAACTTCGAAACACATGAAATCTCCTTCTGGAAGGAACCGAATGGCTTC TTGGAAAAAATTTCCATCGCCATCAGGAAAAAGCCCAAAAGAAGATGTACATTTGAAGGACCAAAATAATGAGAGAGTTGAACCTTCAAAGACAGCAAAT AATAGATGCATTTCTGATGTGGATCTCTCTGCTGCTAAGCCATCTAAGGTTCTTCCTATCAAAGATTTCCAGGGCCATGGTTCGAAGCACCAACGCAAAG TTTCCTGGGGCTACTGGGGTGATCAGCAGAAAAATAATGAAGAGAACTCAATAATTTGTCGTATATGCGAGGAGGAAGTACCTACTTCACATCTTGAAGA CCATTCAAGGACTTGTGCAGTTGCTGATAGATGTGATCGGAAGGGTCTGAGTGTTAATGAGCGCCTTGTCAGAATTGCTGAAACACTAGAAAAGATTATG GAATCATGTACACAAAAGGATACTCAACAGATAGTGGGAAGTCCTGATGTTGCAAAAGTGTCAAATTCAAGTATGACCGAAGAATCTGATATTCTTTCCC CCAAACTTAGTGATTGTTCTCACAGAGGCTCAGAAGATATGCTAGACTGTTTCCCTGAATCTGATAATTCTGTTTGCATGGATGGATTATCACTTATATC ATGTAAAACTCGTCTTGGTCCAAAGTCTGACCAAGGTATGACGACATCATCTGGAGGGAGCATGACTCCTAGGTCTCCTTTAATGACACCAAGGACAAGT CAGATTGACTTGCTATTGGCATGGAAGGGTGCTTATTCTGAGCATGATGATCTGCCACAGATGAATGATCTTGCTGATATAGCACGATATGTAGCAAGCA CACGTCTGGATGATGATCGATCGACATCATACTTATTAACATGTCTTGATGACTTGCGGGCTGTTGTGGATCGAAGGAAGTTTAATGCACTAACCGTTGA GACCTTTGGAACACGAATTGAGAAGCTTATACGGGAGAAGTATTTGCAGCTTACTGAGATGGTGGATGTCGAAAAGGTAGATGTAGAGAGCACTGTAATT GATGATGATGTTCTCATGGAAGATGATGTGGTTCGTAGCTTGAGAACAACCCCGGTGCATTCTTCGAGGGATCGTACTTCTATTGATGACTTCGAGATTA TAAAGCCTATCAGTCGTGGGGCATTTGGACGAGTGTTCTTGGCTAAAAAGAGAACAACAGGTGATCTTTTTGCAATAAAGGTTCTGAGGAAGGCAGATAT GGTCCGTAAGAATGCTGTGGAAAGTATATTGGCAGAACGTGATATTTTAATTACAGTCCGCAATCCTTTTGTGGTTCGCTTCTTCTATTCTTTTACATGC CGTGAGAACTTGTATCTTGTCATGGAGTATCTTAATGGAGGTGATCTGTATTCATTGTTACGAAATTTAGGTTGCCTAGATGAGAAAGTTGCCCACGTAT ATATTGCCGAAGTGGTGCTTGCATTAGAATATTTGCATTCACTGCGTGTGGTTCATCGTGACTTGAAGCCGGACAATTTATTGATTGCACATGATGGTCA CATTAAGCTAACAGACTTTGGGCTTTCAAAAGTTGGTCTCATCAACAGCACAGATGATTTGTCTGGTCCAGCAGTGAGTGGCACATCCCTACTAGGGGAG GACGTGCCTCACTTATCTACATCTGAGCATAAAAGGGAACTGCGGAAGAACCGTTCTGCTGTGGGAACACCTGATTATTTGGCACCAGAGATACTTTTGG GAACTGGACATGGGTATACAGCAGATTGGTGGTCTGTTGGAGTCATCTTATTTGAGTTGCTTGTTGGTCTTCCACCCTTCAATGCAGAGCATCCTCAGAG CATATTTGATAATATCTTTAATCGTAAGATACCTTGGCCTGCAGTTCCTGAGGAAATGAGTTCTGAAGCTCAAGATCTTATTGATCGGTAATAGACATGT TATTTATTATTATATGTATTAGGAAGTTATTTGTTTTGAGCAACATCTTTTAGAATATCAATCCCTTCAGACTGCCATTTTTAATACCTTTATGTATTTT TTGCTGCTTGTTAGCAATCGTGGCCCTATATTCTGTAATGTTTAGGAAAGCCAATAACATTCTGGTGACTTCAACTGCTAATGCATGCTTTTTTTTTGCC TTCAGTTCAGAAGTCTGCAAGAGCAAAATATATAAACTTTACGGCCTGTTTATTAAAATGCTCCACTGATATTTATTTGAGGGGTCTGATTACTTCTCTT TTCTTAAAAATAAAGAATCCAAATGTAATCAATCTACAGAGTACAAACCCTAGTCTGTTTTCAATTTAGCTTTCTGTGTAAGTACCCTTAGCTGGGGTTC TGATCTGTCTTGAGGCATTGTTTGCTTTCCAAACCATCTTCAGATATCCAGAGGAGTTTAGTTGTCCTGGCCTGATTCATTTTAGTCCCATATAACTGCT TAATACTTCCTTTTATGATTCATAATACTTCACTGCATATTATATATTTCAGTGTTAATAAAAAAATTCCTGCTTTATGTCATAATGGCATGACGGGAGC CTTGTGCACTGAGTCGTCTTGTATGGCAGAATAGCATGATCTACTTAATATCTGTTCCAAATGTTAGTCTCTTTGCACTGTTTAAATTAGTATATTCAGT TTTGTCCAAGAGATTCTCAAAAACATTTTTTTGAGTACAAGCGTAATAGGTAACCTCTTTAGTGAGTTAGTTAGAATAACTGTCAGGGGTTGTTAGTATG TAAGTTTGTTGTAAATAAGGCATGTTAGGAAGAAGGGTGAGAGGGAGAGGTATCTAGTCATTTGTAGAGAGAGTTGGGGACGTTAGCATAGGTAG BLAST |
Tissue | flowers |
Gene name | LI_gene_79202; |
Additional information | details; |
FPAB | abscising flower pedicels |
FPNAB | non-abscising flower pedicels |
LF1 | lower flowers stage 1 |
LF2 | lower flowers stage 2 |
LF3 | lower flowers stage 3 |
LF4 | lower flowers stage 4 |
UF1 | upper flowers stage 1 |
UF2 | upper flowers stage 2 |
UF3 | upper flowers stage 3 |
UF4 | upper flowers stage 4 |
Annotations of Ll_transcript_177929
Blastp | Probable serine/threonine protein kinase IREH1 from Arabidopsis with 65.68% of identity |
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Blastx | Probable serine/threonine protein kinase IREH1 from Arabidopsis with 65.5% of identity |
Eggnog | microtubule associated serine threonine kinase(ENOG410XPWX) |
Kegg | Link to kegg annotations (AT3G17850) |
CantataDB | - |
Mirbase | - |
Ncbi protein | Link to NCBI protein (XP_019458158.1) |
Pfam | Protein kinase domain (PF00069.24) |
Rfam | - |
GO | Links to GO: General; Genes and gene products; Annotations; Ontology; Links to GO: General; Genes and gene products; Annotations; Ontology; |