Ll_transcript_52117

Id TrinityFTRINITY_DN58822_c3_g1_i9
Name TranscriptLl_transcript_52117
SequenceCACAAACGGGTCGGGTATCTCTGGAATCTTCTGACCCATCATCTTCGATTTCGAGCACGTTCTTTCCCTTCTCTTATTATTTCACTATTTCTTCTTTCTC TCTCTGTTACGTTCTTCTGCAACTCCAAAACTCAAAACCTAATTCAATATCCATAGAGATATGGAGAATCAAACGAATCACGAAACCTCAGAGCAACCGA ATAATGAAACCGAAGAACAAGCTGAATTGCAGGAACACGATGAAGAAGATGATTCTAAGAAGGAAGAAGAAGAATTGGTTGCAAAAGTTAACAAGCTTAT GGATAAGATCACTGCTTCACCTGATAACCCTAAACCTACCGTTCTCCACGCTCTTGCCTCCATTCTTGAGACCCAGGAATCTCGGTACATGGAAGAGAAT GATCATTCTTCCTCAAGTAATGGACGTGCTGCTCACAGCATTGGCCGCCTCGGGAGTATTATCCGGGAAAATGATGAATTCTTCGAGTTAATATCGTCGA AGTTTCTATCAGAATCAAGATACTCAATTTCTGTTCAAGTTGCTTCTGCCAGACTTCTCCTATGCTGTTCCCTAACTTGGATTTATCCTCATGTTTTTGA AGAACCTGTAATAGAAAACATCAAAGACTGGGTGATGGATGAAAGTGCCAGAGTGTCTGCTGAAGATCAAAGTCTGAAGCATCATCCAAGGAAACGGGAA GCTTCTGATTCTGAAATGTTGAAAACCTATTCTACTGGACTCCTTGCTGTGTGTTTGATTGGTGGAGGTCAAGTGGTTGAAGATGTATTGACATCTGGTT TGTCAGCTAAGCTTATGCGTTATCTTCGTCTACGTGTGCTGGGAGACACAAGTAGCACTCAAAAAGATATTGGTCATTCAACAGAGGGTAGGCATGCCAC TGGGAATAGTTCACTGAGAAGTAGAGATGATGGTCGCAGTAGATTTCGCCACCTTATAGAAGCAAGTCGTTTAGATGATACAAGGATGATTGATGAGAGA TCTTTAGAAGACCAAATTCATGAAAGGGTTCCAGATAGAAACATTGGTGAACAAAATTTCCCAGATAATTCTTGGGTAGGTGGTGAACCACCTGATGGGC TGGGTGAAGATGCTGATATCTGCGAAGTAGATGCTGTTGGGGAGGATAGATGGCACAGTTTAGATGCACGTGATGGAAGGATAAAGCATGGTGAGCATGA TGACAATGTTAATGATTCTTCAAGGCGGCGTACTAAATGGGCAAGATCTCGGGGGAAAACACGGGTCAATGAGAGTACTATTGAAAGTGAACCTGTTTTG TCATCTCCTGGTTCTGGTAGTCGATTAGGACAGGGACGGAGTGTTCGAGATAGGAGCATATCAAGGAATGCTGATGCTAGGAAGGTGCCTGATTCTAAGA AGACTCATGTGCGGGCCACTACGGAGACTTCACTTTTGGAAAGAGAGGATAATGATGATTGTTTCCAGGAATGCCAGATTGGAAGTAAAGATATTTCTGA TCTTGTTCGGAAAGCTGTCCGAGCTGCTGAAGCTGAAGCCAGGTCAGCCAATGCACCCGAAGAAGCGGTCAAAGCAGCGGGTGATGCTGCTGCTGACCTT GTTAAAACTGCAGCTTCAGAGGAATTTAAATCAAGTAATGATGAAGAAGCAGCTGTTTTGGCTGCTTCAAGAGCTGCATCAACTGTTATTGATGCTGCAT CTGCTGTTGAACTTTCAAGGAGCTCCATTGGAATCAATTCTGAGACTGAGAGTGTGAGTTGCAGAGAAACAGACTCTGGTGAGGATCTTGAAGATTTCTT CATCCCAGATACACAATCACTTTCAAAGTTGAGGGAAAAATATTGCATTCAGTGTCTTGAGTTACTCGGAGAATATGTAGAAGTCCTTGGCCCTGTGTTG CATGAGAAAGGGGTTGATGTGTGTCTTGCACTTCTGCAGCAGAATTCTAAACATCAGGAAGCATCAAAGGTTGCATTACTGCTACCTGATGTCATGAAGA TGATCTGTGCTTTGGCAGCTCATAGGAAATTTGCTGCTCTATTTGTTGACCGTGGGGGAATCCAAAAGCTGCTTGCTGTCCCTAGAATGACTCAAACGTT CTTTGGCCTCTCTTCTACTCTATTTACTATTGGTTCTCTTCAGGGGATAATGGAACGTGTTTGTGCTCTTCCATCGGATGTTGTTTATCATGTAGTTCAG TTGGCTCTCCAACTCATTGACTGCAACCAAGACCAAGCCCGAAAGAATGCAGCATTGTTTTTTGCTGCTGCATTTGTCTTCAGAGCAGTTCTTGATGCTT TCGATTCGCAAGATGGATTACAGAAACTACTAGGACTTCTAAATGATGCTGCTTTAGTAAGATCTGGAGTAAATTCTGGAGCCTTGGGCTTATCCAACAC AGGATCACTTCGAAATGATCGGTCCCCGGCAGAAGTTCTGACATCATCCGAGAAGCAGATAGCTTACCACACTTGTGTTGCTTTGCGGCAATATTTTAGA GCACATCTCCTTTTATTAGTGGATTCTATTCGTCCAAACAAAAACAATCGTAGTACTGCTAGGAATATTCCAAGTGTTAGGGCTGTGTACAAGCCTCTTG ACATTAGTAATGAGGCTATTGATGCAGTATTCCTACAACTGCAAAAAGATCGAAAGCTTGGTCCTGCATTTGTGAGAACTCGTTGGCCACCAGTTGAGAA GTTCATGGCATCCAATGGACATGTTACTATGTTGGAATTGTGTCAGGCCCCATCTGTGGAGCGTTATCTGCATGATTTGCTTCAGTTTGCGCTGGGTGTT CTGCATATTGTTACCTTGGTACCTAGCAGCCGTAAAGTGATTGTAAATACAACATTAAGCAATAACCGTGTTGCTATAGCAGTAATTTTGGATGCTGCAA ATATTGTTGGTAGTCATGTGGACCCTGAGATAATTCAGCCAGCATTAAATGTTTTAGTTAACCTCGTTTGCCCTCCACCTTCGATTAGCAATAAACCCAC TGTATTTACACAAGGGCAGCAGTTTCCTTCTGCCCAAATTACAAATGGTCCTCCCTCGGAGACTAGAGATAGAACTGCCCAATCCAGTCAGATTGATCCT AGGGAGAGGAATGGGGAAACCAGTACTGCAGTACTTAGTGCACAAAACGTAAATAGCAATCCACAAACTCCTGGTTCGACTACAGCTTCAGGATTGGTTG GCGACCGTAGAATATCTCTGGGAGCAGGAGCTGGTTCTGCTGGCCTTGCTGCACAACTGGAACAAGGATATCGCCAATCAAGAGAAGCTGTTCGGTCTAA TAATGGTATAAAGGTTCTTCTGCATCTCCTCCAACCACGCATATATTCACCTCCTGCTGCATTGGACTGTCTTCGTGCTCTAGCTTGTCGAGTCTTGCTT GGATTAGCCAGAGATGATACTATTGCACAGATATTGACAAAGCTTCAGGTTGGGAAAAAGCTTTCAGAATTAATTCGGGATTCTGGAAGCCAGACACCTG GAACAGAGCAGGGTAGGTGGCAAGCTGAACTTTCACAGGCTGCAATTGAGCTAATCGGGATAGTGACTAATTCTGGGCGTGCAAGTACTTTAGCTGCTAC TGATGCAGCTACTCCTACCTTAAGGCGCATAGAAAGAGCAGCAATAGCTGCTGCCACTCCTATTACCTATCATGCAAGGGAACTGCTGCTCCTAGTTCAT GAACATCTGCAGGCATCTGGATTGTCACATACCGCTTCAATGTTGCTCAAGGAGGCTCAGTTGACTCCTTTGCCCTCACTGATTGCTCCATCTTCTCTTG CGCAACAGCCTAACACACAGGAAGCTTCTTCAATACAAATTCAGTGGCCCTCTGGTCGTACTGCTGGGTTTCTCACTAACAAGTTAAAGATTAATGCAAG AGATGAGGAGCCTAGCTTGAAAATTGGATCTGTCTCTGCAAAGAAAAAATCACTGAGTTTTTCAGCATCTTTTGGTACTCATTCAAGACATCAACTTGTT GATTCTCTGCTGTCACCAGGGAGAAAATGCTTTGGTACAGTGACAGAGTCTTCAGAAACTAGTATAGTGGGGACTCCATCTGAATCTTCAGTGAAACATT ATGTTGATGCTGGATCCACCAAGACTCCAATGTTTCCTATGAAACGTAAGCTATCTGATGTGAAGGATATAGCAATGCTTTCATCGTCTGGAAAGCGACT GAATGTTGGGGATCAAGGACTTCGTTCTCCTATTTGTTCAAGTTCAATTCGTAAGAGCAGCCTGCAGACTGATGCTGTAGGGTTTTTTACACCAATTTCA AACCTAAGAAGTCAACAAAACCGTTGTACAGCTGACTCTGTGGATGATAATCAATACAGTATCTCAAATCCAGGTCAGATGATACCATCTTGCCAAGTAT TTAATGAGCTTCAGCTTAATAACCCAGAGCGTATAACACTAGATTCTTTAGTGGTTCAGTATCTGAAGCATCAGCATCGCCAATGCCCAGCTCCTATTAC CACCCTTCCTCCACTCTCTCTTCTACACCCTCATGTTTGTCCTGAACCAAAGCGAAGTCTTGATGCCCCTTCTAATGTGACAGCTCGGCTTGGTACACGC GAATATAAATCTTTGTATGGTGGAGTGCATGGGAATCGCAGGGATCGCCAATTTGTTTATAGCCGGTTTAGGCCGTGGCGCACTTGTCGGGATGATGCTG GTGACTTGTTTACTTGTATTACCTTTGTTGGGGACTCCTCTCATATTGCTGTTGGGAGTCACAACGGAGATCTCAAATTTTTTGACTCCAACAACAGCAA TGTGGTAGAGAGCTACACTGGTCACCAAAACCCTTTGACCCTTGTTCAGTCTTTTGTTTCTGGTGACAATCAGCTATTGCTTTCTTCAAGCTCCCAAGAT GTTAAGCTGTGGGATGCAACATCAATTTTAAATGGTCCTACCCATTCATTTGAAGGGTGTAAGGTTGCCAGGTTTAGCAATTCTGGAAATGTTTTTGCGT CCTTGCCATCAGAATCTGCCCGACGGGAAATCCTCTTGTATGATATCCAAACTTGTCTGTTGGAATCAAAGCTGACAGATCCACTTGAAGCTTCTACTGG GAGGAGTCATGTTTATTCTTTAATTCACTTTAGCCCTTCTGACTCAATGCTGCTTTGGAATGGTGTCTTATGGGACCGGCGGGTTTCTGGGCCTGTTCAT CGCTTCGAACAGTTGACAGACTATGGGGGTGGAGGCTTTCATCCTGCTGGCAATGAGGTTATTATAAACTCTGAAGTCTGGGATTTGCGAAAGTTCAGAC TGCAACGTAGTGTACCTTCGTTAGATCAAACTTCAATAACATTCAATGCATGTGGTGATGTAATGTATGCAATCTTAAGGAGGAATCTTGAGGATGTTAT GTCAACAGTTCACAACACACGTCGAGGCAAGCATCCTCTTTATGCAGCTTTCCGTACATTGGATGCAATCAATTATTCTGACATTGCTACTATACCCGTG GATCGTTGTGTTCTTGATTTTGCTTCTGAGCCAACTGATTCATTTGTTGGGTTGGTTACTATGGATGATCAAGATGAGATGTATGCATCAGCCCGAATAT ATGAAATTGGTCGCCGGAGGCCAACTGATGATGATTCTGATCCTGATGATGCAGAGAGCGAAGAAGAAGATGAGGATGATGACGACGATGATGATATTGA TGTAGATCCTCTCTTAGGCCCTGGTTTCGGTGGAGACAGCGAGAGTGATGGTGATGACATGAGTAATGATGAAGATGACGATGATGATGAGGATATTATA AGTGACATCGACGGTGAAGATGCAGATTTCCTTTTGGATGATGTAGACTTCGACGGCGAAAACGAAATGTTCGAGATTGCTTCTGGTGATGAGGATGATG ATGATAGTCAAGGATATGAAACTTTAAGTAGTGATGAAGAGGATTATGTGAATAATCGTAATCGCTTTGGTTATTGACTGTTAAACGCAGGCTGTAATTA TGATTTCTTTCTTTATCATAATTCATTTTTGAGCTAAAGATATATTTGTTTGGGGCTCAAAATTTTGCTGTTACCCTTTTACATTATGCCCCATGCAATC TGACTATTATTATTGCTATGATTTTGATAGAATGTGAACCACCGCAATTGTATATGTTGTTTCAAAACCATAGTTTTTCTTCAATCTAAGTAGTAATGGG TGTCTTCACCTCACCGTTTCAGAATGTTGGAGTTGCACCTTGATATTACAACCTAGTACTCCTCTAATTGATTGACCTTAACATTTAAGCCATCTTGTGC ATAGATATTGAACCTATAGAGATGGTCTCCATGATCCTTGAATGGAAGGGTCAACTGAACCTATAGTCCTCTTAGCAGCACACCCTTTCAAAATGACATA AGTGGACCCTACAGTCCCTCCAACTACTAATCAACAACAATCGCTTTTCAATGATAACATCAGTCACTGCAAAATGATTAGTGGTTTGAGGATAAGGATG GCCCCAAGAGTTCAATGGAGTTTGATAGAAAAGGGATGAAGATGATGGAGGATGGTAAGGTTGGTGGTGGCATGATTCCTCAAGTAAATTGTTGAATTCA ATCACTTGCTGAAACTATGATTAGTGGGTACTATGGTCAATCAATGTTGAATTCAATCACTTGCAGTTTTTGTCATTTCTTAATGCAAATGTAGCAACAC GGGGAC BLAST
Tissueflowers
Gene nameLI_gene_80402; 
Additional informationdetails; 

Expression of Ll_transcript_52117

Labels

FPAB abscising flower pedicels
FPNAB    non-abscising flower pedicels
LF1 lower flowers stage 1
LF2 lower flowers stage 2
LF3 lower flowers stage 3
LF4 lower flowers stage 4
UF1 upper flowers stage 1
UF2 upper flowers stage 2
UF3 upper flowers stage 3
UF4 upper flowers stage 4

Annotations of Ll_transcript_52117

BlastpDDB1- and CUL4-associated factor homolog 1 from Arabidopsis with 57% of identity
BlastxDDB1- and CUL4-associated factor homolog 1 from Arabidopsis with 56.36% of identity
EggnogVpr (HIV-1) binding protein(ENOG410XR8C)
KeggLink to kegg annotations (AT4G31160)
CantataDB-
Mirbase-
Ncbi proteinLink to NCBI protein (XP_019416933.1)
PfamLisH (PF08513.10)
Rfam-
GOLinks to GO: General; Genes and gene products; Annotations; Ontology;
Links to GO: General; Genes and gene products; Annotations; Ontology;