| Id Trinity | FTRINITY_DN58934_c0_g2_i1 |
|---|---|
| Name Transcript | Ll_transcript_38940 |
| Sequence | AAAAGCGTGCAGCAACAACAGCATAGCCCCTTCAACGAATGATCTCGCTATTAAATAATCGGGGTGCATCATCGATTAGCGCTCGCTAACTACTCTTTCC GATCAACATCACCGCCGACTCCAATCTTCCTCGCCGGAAACCCTATCTTTCACGGTTCTGCTTCTGATCACCACTCGCTCAGAGGGGAAAGCATAACTGC GTTCTTGTTTTGCTCCAAATTCAATATCATCGGGAAAAAAGTGGCGATACCGGAGGTCTAGGGTTCCGGTAGAATTCTCTGAAGGTTTGACTGTCCGAGC TCTGATTGGTTCATAATTACCTGATTGAGATAATTTGGAGGGAAATTTGCAAGGGTTCGTCGCCGACGGTGAGGGGAGGAAAACCTAATTTCTGTAATTT GGCCTTTCTTCTTCGGGGGAATTTCGGAGTGAAACAGCGCCTGCGAAGTTAGAATTTGAGGGTTTTAATTGGGCACAGAAGGCGTAATAAGAAGATATTA ATTGGAGTCCAGTGCTGTAGCTGTGCTTTGATGAGTTATTGATTCTTGCATTGAATTGTGATATCAGTTCTGCCACACAACATGGGGTACCATTCGGATA ATTCACAAGACGGGAGGGAAGAAGATGATGAAGAAGAATATGAGGAGAATGGCAAGGGTAATCGTTTTCTTGGGTTCATGTTTGGAAATGTTGATAACTC TGGTGATCTTGATGTTGATTACCTTGACGAGGATGCAAAGGAGCATCTATCTGCATTGGCTGACAAGCTGGGCCCATCACTGACAGATATAGATTTGTCA GGAAAATCACCTCAAACACCACCCGATGTTGTTGAACAAGGTGAAGTTGTATGCCAGGAAAAACTATATCATGCAGTTTTTGATATTCTGTTGACTGTGG TGAAAAAGCCGAAGATGCGGTTGATTATGAAGATATTGATGAAGAGTATGATGGTCCAGAGACTGAAGCTGCCACTGAAGAGGATTATTTATTGCCAAAA ATGAATTTTTTCTCTACTGAAGCCTCTCTTCAAGTCTTGGAGTCCAGAGCTTCTGTTTTTGACGATGAAAATTATGATGAGGAATCTGAAGAGGAACAAG ACTTGGTGAATAATGATTCTAAAGTTGATGACATCTCTTTAACCGGGGAGCAGAAAGAGAGTTCTGTAGATGTGTCTAAAGGAGAGAGCGCTGAGGAACT TGGTCTACAAGTTGACTTACCACAGACTGAAGAATTGGACACCGAAATACAAAAAGTTGTGGAAGAGCCTGAAGTTCTGAAAAGGTCTACACCATTGCCC ATTTTGTGTGTGGAAGATGGGGTGGCTATTTTACGCTTCTCTGAGATCTTCGGTATTCATGAACCTCTGAGAAAGGGAGAAAAGAGAGATCATCACCATT CTATTCCTAGAGATAGGTACAAGTCTTTCAATTTTTCTGATGATACTGTTGAAGAGGATGAAGAGGCATTCCTCAAGGGCTTCTCCCAGAATCTCTCACT TACTAGACAGGCTTGTGTAGTTCGTAATGATGTATCAGAAAGCAATGATGTTGACTTGGAATTTCCAAAATTTGGGTTTCTTCATGGGGATGCCTCAATG GATGTGAAAGATGATAGGCAACAGAAAGACTGTTGTCAAAGTGCTGAACCAATGAAAGTAGATTTAGCTGAAGGTCTTTCCCGAAAAGATGATTCCCTCA TAGGGTCCAGCTTTTACCCTCTTGATCAGCAAGACTGGGAAGATGAAATCATTTGGGGCAATTCTCCAGCTGGTGATAATATTGTTCAAAGCTGTGAAAT TTATGGATCAGATTTGGGAGATTCTGGTGGCAATGAAATAGAAATCGAAAGTGAGAAAAATCTTCAGTTGAATCCCCTGAAGACAGGGGAGAAAGATGAC AATGACTTCACATGTGGCCCTTCTGTCTCAGTGGAGCCCTTTGGTTCAAGGGATACTTCAGGATCTAAAACTGATTTATTGTCAGAAAGCCTATTTCATC CCCAGCTTTTGAGGTTGGAATCCAGATCTCAAGAGGATAGCTCCTGTCCTGCCGATGGTAGAGGGGTGAATATAACTGAAAAGCATAACCAAATTGGTCA AGTAAAGTGTTTTACCAAGGTTTTGTCTCAAAACAGAGAAATGATGGAGGGTTCCTGGCTAGACAAAATAATATGGGAGGAGCTTGATAAACCTATTATA AAACCGAAGCTTATCTTTGATCTTCAGGATGATCAAATGCACTTTGAAGTTTTGGATAGCAAGGACACTAGACATCTTCGCCTTCATGCTGGGGCTATTA TTTTAACCCGTTCCCTAAAATCGAACAGTGGGGACTCTTCTGAGCTACCTGGACATGGAGGTCAGCATGGATGGCGAAGTGTTGCTAATGACAAACACTA CTCAAACAGGAAAACTTCTCAGCAACTGAAATCAAATTCTAAAAAACGCTCGGCTCATGGGGTCAAAGTTTTTCACTCACAACCTGCACTGAAGCTGCAG ACGATGAAGTTGAAGTTGAGCAATAAAGATATTGCAAATTTTCACCGGCCGAAAGCATTATGGTATCCCCATGACAATGAGATGGCTGTCAAAGAACAAG GGAAGTTGGCAACACAAGGACCCATGAAGATTATTATGAAGAGCTTGGGCGGCAAAGGGTGTAAACTGCATGTTGATGCCGAAGAAACTCTCTCATCTGT TATAGTAAAAGCTTCTAAAAAGCTAGATTTCAAGGCATCCGAGACAGTGAAAATATTTTACTCAGGGAGGGAGCTTGAAGATTACAAATCACTTGCTGCA CAAAATGTTCAACCAAACTCCTTGTTTCATCTTGTCCGTACAAAGATACATTTGTGGCCAAGGGCACAAAGGGTTCCTGGTGAGAATAAGTCTTTGCGTC CCCCAGGGGCATTCAAGAAAAAGTCTGATTTGTCGGTGAAAGACGGACATGTTTTTCTGATGGAGTATTGTGAGGAAAGGCCTTTACTTTTGAGCAATGT TGGAATGGGCGCAAGACTTTGTACATACCATCAAAAATGTTCACCTGACAACCAATCTTGCTCCTTAGTACGCAACATAAATAGCAGCTCGGGACACATT ATTTCTTTGGATCCTTCTGATAAATCTCCTTTCCTTGGTGATTTAAAACCTGGTTGTAGTCAGTCATCACTTGAGACAAATATGTACAGAGCACCGATAT TTCCTCATAAAGTTCCGTTAACTGACTACCTGCTGGTTCGTTCATCAAAGGGAAAGCTATCATTGCGGCGCATTGATAAACTTAATGTTGTTGGGCAGCA GGAGCCTCTCATGGAGGTATTATCACCTGGAAGTAAGAATCTTCAGACCTACACAATGAACAGGCTATTGGTACACATGTGCCGTGAATTCCAAGTAGCA GAGAAGCAACACTTACCTCCATACATTCGTACTGATGAGTTCCTGTCACATTTTCCTTACCTTTCAGAAGCCTCTCTCCGCAAGAGAATCAAGGAATATG CCTATTTACAGAGAGGAACAAGTGGACAGACAATTTTAGTTAAAAAGCGGAACTTTCGCATGTGGTCGGAAGATGAATTAAGAAAAATGGTGACACCAGA GCTTGTTTGTGCCTATGAAAGCATGCAGGCTGGTCTGTATCGTCTAAAACATTTAGGAATAACTGAAACACACCCTACTCATATTTCGTCTGCAATGAGT CGGCTTCCTGATGAAGCAATAGCACTGGCTGCTGCATCACACATTGAGAGGGAACTACAAATTACTCCGTGGAACTTGAGTAGCAATTTTGTTGCCTGTA CAAGCCAGGGTAAGGAAAATATTGAACGGATGGAAATTACTGGCGTTGGTGATCCGTCTGGCCGTGGCATGGGTTTTAGCTATGCTCGAGTACCTCCAAA GGCACCAGTGTCTAGTGCAATGGTGAAGAGGAAAGCACCTACTAATCGAGGAGGTTCCACAGTCACTGGTACAGATGCTGATCTACGGAGATTAAGCATG GAGGCTGCTCGAGAGGTTCTTCTTAAATTCAATGTTCCAGGGGAGATCATTTCAAAACAAACCAGGTGGCATCGCATTGCGATGATACGCAAACTTTCAA GTGAGCAAGCTGCATCTGGGGTTAAGGTTGATCCAACAACTATCAGCAAATATGCTCGTGGGCAGCGAATGTCCTTTCTTCAGTTACAGCAGCAGACCAG GGAGAAGTGCCAGGAGATTTGGGATCGACAAATCCAGAGTTTGTCAGATATAAATGGCGATGAAAATGAGAGTGATTCAGAAGGGAATAGTGATCTAGAT TCCTTTGCTGGAGATCTGGAAAATTTACTTGATGCTGAGGAGTGTGAAGAGGGTGAAGAGGGTACGAATGACTCAAAGCGTGATAAGGGGGATGGTGTTA AGGGACTTAAAATGAGAAGACGCCCAACTTTAGCCCAGGCAGAAGAGGAAAAAGAAGATGAAGCAACCGAGGCTTCTGAATTATGCAGGTTGCTCATGGA TGATGATGAAGCTGATAGGAAGAAAAAGAAGAAAGCTAGAGTTGTGGTGGAAGAAGCAAGATTGGTACCAAAGCTGCAATCAAAATACATCTTTGACAAC ACTGAAAAATTTAACCAAATAAAAAATACTTTGCAACTAGATGATACTAATCATTGGAAAGGGGATACGATTACAGATCTTGGGGAGGGGGGGAAATTTT CTGCTAAAAAAAGCACTTCAGTGAAGGTCAACAAGGCAAAGAAGAATGTTATCCCACCTATTAGTCTACCCAGTAAAAAAATTAAACTAAATATGGGGGA ACCAATCAAGGTATTTAAGGAGAAAAAACCATCCAGGGAAACTTTTGTTTGTGGAGCATGTGGCCAGCTTGGACACATGAGAACAAACAAGAACTGTCCA AAATATGGTGAAGACGTTGAAGCACAGCTTGAATCTACAGACATGGAAAAATCATCTGGAAAAGTGGATCCCTCTAGTCATTCCCAGCGTAAAGCCCTTT TCAGAATGTCCATATCAAATAGCACTACAAGAATTGCTCCTGTTGACAATTCAACTAAAATTCCAGTGAAGTTCAAATGCAGCTCCACTGAGAAATCTTA TGATAAACCTGCAATTGAGACCCTGCGAAGTTCTGACAAGCCAGTTACTTCTGACTCTGAAACTGCCAAGCCTGCTAAGGTCAATAAGATAATTTTTCCC AAGATAGTGAAACCAGATGATGCGCAGGCTGAATCTCTAACGTCTGGTATTGTTATACGGCCTCCTACTGATTCAGGTAGAGGTCAGATTGATTCTCATA AGCTCCCAATTAAAATACCACAACCACCAGCAGAAGTAGATAGGGAGCGATCACACAAGAAGAAGATTATTATAAAACGCTCAAAGGAAGATTATTATAA AAATGATCAGGACCTCGACAGTCCTGGTGGAAACACAGGATTTGAACACCGGAAAACTAAAAGAATTGTTGAATTATCAAATCTTGAGATGCATAGAAAT CAGGAGACAATGTATTCAACTGAAGGTTTGGTAAAATGGAAAGGTAAAGAGGATAGAAGATGGTGGGAAGGGCAAGAGAAACAGAAAAATGAAGCTAGAC TCAGAGAAGACTGGGTAAGGAGACATCACAAAGAATTTAAGATTCCCAAAGAACAAAAACTAGATGAGATTAGAAGATATGAAGAAGATATTAGAATGGA GAGGGAGGAGGAAGAACAACAAAAGGCAAAGAAGAAAAAGAAGAAAAAGCTCGAGTTAGGAGATGACTACTTAGATGGTCCCAGAACAAGACATGATAAG AGGATGCTAGAAAGGAGCGGAAAAAGGAGACATGTTGAGTTAGGCAAGGGTGGTGCAGATTATATGCAGCCAATAAAACGCCGAAGAGGGGGAGGTGGAG AGGTTGGTTTGGCAAATATTTTGGAGAGCATTGTGGACTCCATTGTGAAAGACAGGAACGATCTGTCCTATCTATTCCTGAAACCGGTGTCGAAGAAAGA GGCACCTGACTACCTTGACATTATAGAGAGACCTATGGATCTTTCCAGAATCAGGGAGAGGGTGAGGAATATGGAGTACAAGAGCAGAGAAGATTTCAGA CATGATATGTGGCAGATAACTTACAATGCTCATAAATATAACGATGGCCGAAATCCAGGAATTCCTCCCCTAGCAGATATGCTTTTGGAACATTGTGATT ATTTGTTGAATGAGAATGATGATAACCTCACTGCAGCTGAAGCTGGCATTGAAATTAGAGATTTGTAAGTCATGCTAAATTCAGATCATGATATGAAGGT TAGGTAGAATTGTTTTAATTATTTTGGAATGTAGTATGGAAATGAGGTTGTAGTATCACCATCTATAGTTCATTAATTTAGATTCATGTTGTGCCTCCTT TAGAGAGTTATATTAGATTAGATTTTATATTTGGTAGTTAAAAAAAAGAGCAAGATTTTTCTCTAAAGATATACACATATTTTCAAGTAATAAACAAAAC TTTCAAAATGC BLAST |
| Tissue | flowers |
| Gene name | LI_gene_81336; |
| Additional information | details; |
| FPAB | abscising flower pedicels |
| FPNAB | non-abscising flower pedicels |
| LF1 | lower flowers stage 1 |
| LF2 | lower flowers stage 2 |
| LF3 | lower flowers stage 3 |
| LF4 | lower flowers stage 4 |
| UF1 | upper flowers stage 1 |
| UF2 | upper flowers stage 2 |
| UF3 | upper flowers stage 3 |
| UF4 | upper flowers stage 4 |
Annotations of Ll_transcript_38940
| Blastp | Transcription initiation factor TFIID subunit 1 from Arabidopsis with 50.68% of identity |
|---|---|
| Blastx | Transcription initiation factor TFIID subunit 1 from Arabidopsis with 50.08% of identity |
| Eggnog | bromodomain(COG5076) |
| Kegg | Link to kegg annotations (AT1G32750) |
| CantataDB | - |
| Mirbase | - |
| Ncbi protein | Link to NCBI protein (XP_019445198.1) |
| Pfam | Protein of unknown function (DUF3591) (PF12157.7) |
| Rfam | - |
| GO | Links to GO: General; Genes and gene products; Annotations; Ontology; Links to GO: General; Genes and gene products; Annotations; Ontology; |