| Id Trinity | FTRINITY_DN58934_c0_g2_i15 |
|---|---|
| Name Transcript | Ll_transcript_38960 |
| Sequence | CGAGTTTGGTCCAGTTGAATAAAATCGCGTAGCAACAACACCATAATCCACTCTCTTCTCAACGAACGATCTCACATTTAAATAATCTCACAATTGCGCC ATCAATAACCGCTCTCTATTCTCCGATCATCATAACCGCCGTTTCCAATCTCACTCGCCGGAAACCCTCCCTTTCACGGTGCTGCCTCTGATCACGAGTC TCGCTCAGAGTAGTGGAACCATAACTCCGTTCTGATTTTGCTCTAAATTAAATCACGTGCACGATATCCGATGGTTTAGGGTTCCGGCAGAAATCATACA AGGTTCTACTCTCCGAGCTCGAATTGGTTGATAAATAACTGTCTGAGATAATTAGGAGGGAAATTTGCAAGGGTTCTTCGCCGGCGGTGAGAGGAGGATA ACCTAATTTCTGAACTACGGATTTTCTTCACCGGGGAAGTAAGAGAGAATTTCACGGCGAGGGTTTTAATTGGGCATAAGAAGAAGATAGTAATTGGAAT TTGTTGCTGCTGTTATGCTTTGTTGAAATTGTGATATCTAGTTGCATACACAACATGGGGTATGATTTGGATAATTCGCAAGATGGGAGGGATGAAGATG ATGAAGAAGAATATGAGGAGAATGACAAGGGTAATCATTTTCTTGGGTTCATGTTTGGAAATGTTGATAACTCTGGTGATCTTGATGCCGATTATCTTGA TGAGGATGCGAAGGAGCATCTTTCTGCATTGGCTGACAAGCTGGGCCCATCACTGACAGATATAGATTTGTCAGGAAGGTCACCTCAAACACCACCTGAT GTTGTTGAACAAGACTGTGGTGAAAAAGCTGAAGATGCAGTTGATTACGAAGATATTGATGAACAGTATGATGGTCCAGAGACTGAAGCTGCCAACGAGG AGATGTATTTATTGCCAAATAAGGAATTCTTCTCTGCTGAAGCCTCTCTTGAAGTTTTGGAGTCCAGAGCTTCTGTCTTTGATGATGAAAATTATGACGA GGAATCTGAACAGGAACAAGACTTGGTGAATGATAATTCTAAAATTGATGGTATATCTTTAGCTGGGGAACAGGAAAAGAATTCTATAGATGCGTCTAAA GGAGAGAGTGCCCAGGAACATGATCTACAAGTTGGCTTACTGCAGACCGAAGAATTGGACACTGAAATACAAAAACTTGAGGAGGAAGGGTCTGAAGTTC TGAAAAGATTTACACCATTGCCCGTTTTGTGTGTGGAAGATGGGGTAACTATTTTACGTTTCTCTGAAATCTTCAGTATTCATGAACCTCGGAGAAGGGA AGAAAAGAGAGAGTATCGTCATTCTATTCCCAGAGAAAGGTACAACTCTTTCAATTTTTCTGATGATACTGTTGAAGAGGATGAAGAAGCATTCCTCAGG GGCTTCTCCCGGAGTCTCTTACTTACTGAACAGGTTTGTGTTGTTCATAATGATGTATCAGAAAACAATTATGTTGACTTGGACATTCCAAAATTTGGGT TTCTTCATGGGGATGCCTCGTTGGCTGTGAAAGATGATCGGCAACGGAAGGATTGTTGTCTTAGTGCTGAACCAATGAAAGAGGATATAGAAGAAGATCT TTCCCAGAAAAATGATTCTTTCATATGGGCGAACTTTTACCCTCTTGATCAGCAAGATTGGGAAGATGAAATCCTTTGGGGCAATTCTCCTGCTGCAGGT GATAATATTGTTGAGAGCTGTGAAATTTTTGGACCTGAATTGGGAGACTCTGGTGGCAATAAAATAGAAATCGAAAGTGAGAAAAATCTTCAGTTTGAAA CCCAGAAGATGATGTGGGAGAAAGATCATAATGTCTTCACATGTGGCTCCTCTCTCTTGTTGGAGCCCTTTGGTTCAAGGGATCCTTTGGGATCTAAAAC CAATTTATCGTCAGAAAGTCTATTTCATCCTCAACTTCTGAGGTTAGAATCCAGATCTCAAGAGGATAGCTCTTGTCCTGCAGATGGTAGAGCGGGGAAT ATATCTGAAAAGCATAACCAAATTGGTCAAGTAAAGCGTTTTACTAAGATTTTGTCTCAAAACAGAGAAATGATGGAGGGGTCCTGGTTAGACAAGATAA TATGGGAGGAACTTCATGAACCTACTGTGAAACCAAAGCTTATCTTTGATCTTCAGGATGATCAAATGCACTTTGAAGTTTTGGATAGCAAGCACTGTAA ACATCTTCGCCTTCAAGCTGGGGCTATTATTTTAACCCATTTCTTAAAATCCAGCAGTGGGGACTCTTCTGAGATACCAGGTCATGGAGGTCAGCATGGA TGGCGAAATGTTGCTAATGACAAACACTATTCGAACAGGAAAACTTCTCAGCAACTGAAATCTAATTCTAAAAAACGCTCAGCTCATGGTATCAAAGTTT TTCACTCACAACCTGCACTGAAGTTGCAGACGATGAAATTGAAGTTGAGCAATAAAGATATTGCTAATTTTCACCGGCCCAAAGCATTATGGTATCCCCA TGACAATGAGGTGACTGTCAAAGAACAGGGAAAATTGTCAACACGAGGGCCAATGAAAATTATCCTGAAGAGCTTGGGTGGCCAAGGATGTAAACAGCAT GTTGATGCTGAAGAAACTCTCTCTTCTGTTATAGAAAGAGCTTCTAAAAAGATAGATCTCAAAGCATCAGAGACATTCAAAATATTTTACTTAGGGAGGG AGCTTGAAGGTAACAAATCATTTGCTGCACAAAATGTTCAACCAAACTCCTTGTTTCATCTTGTCCGTACAAAGATACATTTGTGGCCAAGGGCACAAAG GGTTCCTGGTGAGAATAAGTCTTTGCGTCCCCCAGGGGCATTCAAGAAAAAGTCTGATTTGTCGGTGAAAGACGGACATGTTTTTCTGATGGAGTATTGT GAGGAAAGGCCTTTACTTTTGAGCAATGTTGGAATGGGCGCAAGACTTTGTACATACCATCAAAAATGTTCACCTGACAACCAATCTTGCTCCTTAGTAC GCAACATAAATAGCAGCTCGGGACACATTATTTCTTTGGATCCTTCTGATAAATCTCCTTTCCTTGGTGATTTAAAACCTGGTTGTAGTCAGTCATCACT TGAGACAAATATGTACAGAGCACCGATATTTCCTCATAAAGTTCCGTTAACTGACTACCTGCTGGTTCGTTCATCAAAGGGAAAGCTATCATTGCGGCGC ATTGATAAACTTAATGTTGTTGGGCAGCAGGAGCCTCTCATGGAGGTATTATCACCTGGAAGTAAGAATCTTCAGACCTACACAATGAACAGGCTATTGG TACACATGTGCCGTGAATTCCAAGTAGCAGAGAAGCAACACTTACCTCCATACATTCGTACTGATGAGTTCCTGTCACATTTTCCTTACCTTTCAGAAGC CTCTCTCCGCAAGAGAATCAAGGAATATGCCTATTTACAGAGAGGAACAAGTGGACAGACAATTTTAGTTAAAAAGCGGAACTTTCGCATGTGGTCGGAA GATGAATTAAGAAAAATGGT BLAST |
| Tissue | flowers |
| Gene name | LI_gene_81336; |
| Additional information | details; |
| FPAB | abscising flower pedicels |
| FPNAB | non-abscising flower pedicels |
| LF1 | lower flowers stage 1 |
| LF2 | lower flowers stage 2 |
| LF3 | lower flowers stage 3 |
| LF4 | lower flowers stage 4 |
| UF1 | upper flowers stage 1 |
| UF2 | upper flowers stage 2 |
| UF3 | upper flowers stage 3 |
| UF4 | upper flowers stage 4 |
Annotations of Ll_transcript_38960
| Blastp | Transcription initiation factor TFIID subunit 1 from Arabidopsis with 51.54% of identity |
|---|---|
| Blastx | Transcription initiation factor TFIID subunit 1 from Arabidopsis with 51.54% of identity |
| Eggnog | bromodomain(COG5076) |
| Kegg | Link to kegg annotations (AT1G32750) |
| CantataDB | - |
| Mirbase | - |
| Ncbi protein | Link to NCBI protein (XP_019421081.1) |
| Pfam | TATA box-binding protein binding (PF09247.10) |
| Rfam | - |
| GO | Links to GO: General; Genes and gene products; Annotations; Ontology; |