| Id Trinity | FTRINITY_DN59133_c1_g1_i2 |
|---|---|
| Name Transcript | Ll_transcript_255027 |
| Sequence | ATTGTTCTGAACTTCTGATATTGCAAAATTTCATTGGTATCATTCTCCCTCCCTTCTCCTCCCCAAATTGCACTCCCTCGTTAGTCTTCACGGCGCAGTT ACAGAACACACGTTTTCCGTTGACGTGAGAAGCCGTTACTCGTTTTTGTTACCTTTGCGGGACTTCACTCTCTTAAAACGATTTCAGGAGAAGAAACTAC AGCATCTGAGAAAAACACAAACACAGAAGTTACGGAAAAATAAATTGGTGCTGGTTTGGAGTGAAATTGGGGTTAAATAATTATTTGAACATTCTGTTGG AAACCTACGGTTACACAGAGAAAAAATGGATGGAAAAGATAAGAGGATTAGGGCGAAGAAGAAGAGATCGAAGCCGGTGGAAATTGGTATTGATTTGGAT GATAATGAAACCATTGGCTCTATGTTTAAGCTAAAGAGGATGAAGAAGAAGGTTAATTTGGCGGCAGAGGGGTCTTGTGGTGATGGCGGTAAGAATGGTG AGGTTGTTGGGAAAGATTCAGTTGCTGCAGAAAAGGATTTCGGAGATATGGATGATACCTTGGCGAGTTTCAGGAAGAGGTTGAAGGAACTAAAGAGAGA TCGGAGATCTGAAGCCAGTGGAGGACGGAGTTCTGCTTTGAATGTAGGGCTGGAGTCTTCTGATAGATCTTTGAATGTTTCTGTTGAGGGAATTGAGGGT CACGGTTTGTCTGGTGATGATTTCGTTGCTCAGGAATCAAGGGGCACCTTAAATAATGAGAAAGGGGTATGTTTGTTGCTTGGTGATGGCGTGGAGCACT CTTATAATGAAAATATGGAAGACTCCTTGTCAGTGATTGTCCGAAAGGCACAATCTAATTTGATTAAGAAATCACGGGCCTCTTCAAGTTCAAAGAAAAA AAGAGGGATTGAGAATGTGGATAATGACCTGAGACCTGGCTCTGAAAGTGTTCCTGAAACTATAGATTCTATGGCTGAATTTATATCTAGACCTGCTTCT GCCTTGGTATCGGTGAGGAAAGATCTGACGTGTCCCGGTTCTGTGTCACAATCATCTACTCTGGGTCAATTTTCTTCCATGTCTGTAATTGATAGAGAAA AGCATGACTGTTTTCAAGAGGGTATTGCTGAGGGCATTTGCAATTCAAACATTCCAGGTGAACCATTAGTTGATCACTGTCTCTCAACTAATGTCTGCAA AGGGGATAGACAACTTTTAAATCGGTGTTCTTCCAGGTTAGATGGTGTTGAAATGATTGATTCCACACTTCTTTCAAAATTTGGGGAGGTGGTACATGAA CATACTGAGAGTGAGTTCAAGGATAGATCGACCGATGAGCTATCACAAATGTGTAATGATGCTTCAAAACATGGTGTTTCTATTTCTATTGAGAAAGAAA ATTCCCCACCTTATCATGACACTGAGCCCTTGATTAAATCGACTGAAAGTATATTGAGTGAGAATAATTTTACGGTTTCTGGAATCTTTTTTCAGGAATC ATCAGGCAATGAAGCTCTAAAGCTTTCTGAATCCCATGTGGAAGAGGATGGAGGTGTAAAATCTGAAACTGAGTTTATTTCTGGTAGAAATTTATGTGAT TATAGTAGTTTAGATACAAAGGCTGAAGTGAAAGATTATTTTTTAGGTTCTTCAATTGAAAAAAATGATGTAATGGCTGGTGGTAGTTTATCTCCTATGA TGTCTAATGAAGCCAATGAATTGGCTAATGAATCAAATCACCAAGAGAAACCTTCAGAAATATGTAATAATCCAAAAGACTCTACTGCTTCAGTTTTGGA ATGCTTAGATTCAGTTCAATCCGATGGATCCCCCCTTCCATCTGCAATTCCAGATGAAAATGAGAATTATATAGAGTGCCATTCCTCTCTGTCTGATTTT GTCAACAATGATGGTAAGATATCAGCTGTTCCACGCGCGGTGCGAAAGGCCAGAATGCTCAAGCATGGAGACATGACTTATGAGGGGGATGCTGATTGGG AGATTTTAATAAATGATCAATCTCTTCACGAAAGCCAAGTTGTTATAGATGATGACCACACTCTTAGAGCAAGGGCAAAGCTTGATTCCTCTTTTAATGT TGCCGATGACTCTGAAAGTGTTGCAGTAGTAGCTGTCTCAGCTGGACTCAAAGCCCATGCAGCTAGTCCAATTGAGAAAATAAAATTTAAGGAGATCTTG AAGCGTAAAGGTGGTCTCAGGGAATACTTGGATTGCAGAAATAAGATCTTAAGTATTTGGAGCAGAGATATTACACGCATTTTGCCTCTTGCTGAATGTG GAGTTAGTGATATCCATTCTGACAATGAAGGTCCTCGTTCTTTTCTTATCAGGGAAGTTTATGCATTTCTGGATCAATGTGGTTACATAAATGTTGGAAT CGCCTCTCAGAAGGAGACTCTTGGAAATAGTGCAAGTAATTGCTGTAAACTTGTGAAAGAAAAGGGTTTTGAGGAAAGTTCGACAGCTTCGGTGGCTGAC TCTGAAGATGGAGTTTCCTTTATTGTTGGTCAGACTAAAATGTCAGATACTTCCATGGAGATTAACAATGGTCTAACAGTGGATTACAAAGACCTGAGAA CAGAAGCTGCAGAAGACAGAAGGCCTTTCAATGCAGCAATGATGAGTATATCAAACGTGAGACAACATGAAGAAGGAAAATGTTATGACTACCAGGAAAA TGCTACAGGGCAAAGCAATGAATCCACCTGTGTTAAATCCACATTAGGTGATCAGATAGATGATCTTCTGCAGTCTGATTCAGAGGATAGAAAGAAAGTG ATTGTGATTGGAGCTGGTCCTGCTGGGCTAACTGCTGCTCGTCATTTGAAACGTCAGGGATTTCCTGTAACTGTACTTGAGGCTAGGAGTAGGATAGGAG GTCGTGTATTTACAGATCACTCATCCCTTTCTGTCCCTGTGGATCTCGGTGCTAGCATTATCACTGGTGTTGAGGCTGATGTGGCCACTGAGAGAAGACC AGATCCTTCCTCATTGGTTTGTGCTCAATTGGGCCTTGAGTTGACAGTGCTAAATAGTGATTGCCCTCTTTACGACACAGTGTCAGGACAAAAGGTTCCA CCAGATATGGATGAAGCACTGGAAGCTGAATACAATATTCTTCTTGATGACATGGAATTGCTCGTTGCTCAGAAAGGTGAACAAGCAATGAGGATGTCTC TTGAAGATGGTTTAGAATATGCCCTTAAGATTCGCCGTATGGCACGCTCTAGAAGTAGTGAAGAAACTGAAAAAGATAATTATGGTTATAGTCCGTTTGA TTCTAAAAGAGACTGTACTGTGAAGAAAAAAATTGACAAGGAGATTTTGAGTCCTCTGGAGAGGAGGGTTATGGATTGGCACTTTGCTCATTTGGAGTAT GGTTGTGCTGCTTTGCTTACAGAAGTTTCTCTTCCCTATTGGAATCAAGATGATGTGTATGGAGGATTTGGGGGAGCTCATTGTATGATTAAAGGGGGTT ACAGCACTGTTGTTGAGTCTTTAGGAGAAGGGCTTGCTGTCCACTTGAACCATGTCGTAACAAATGTGTCTTATGGCATCACAGAATCTGGCCAGAATAA TAAAGTCAAAGTTTCTACGTCAAATGGGAACGACTTCTTTGGAGATGCTGTCCTCATCACTGTTCCACTAGGCTGTTTGAAGGCTGAAACTATACAATTC TCCCCTCCCTTGCCGCCATGGAAATATTCTTCTGTTCAGCGTCTTGGCTTTGGAGTTCTCAATAAAGTGATCTTGGAATTTCCTTGCGTGTTTTGGGATG ATGCTGTGGATTACTTTGGAGCGACAGCTGAGGAAAGAGGCAAAAGAGGTCACTGCTTTATGTTCTGGAATGTCAGGAAAACAGTTGGGGCTCCTGTCCT TATAGCATTAGTGGTTGGTAAGGCAGCCATAGATGGTCAGAGTTTGAGCTCTACTGATCATGTCAACCATGCATTGAAAGTTCTACGTAAACTTTTTGGG GAGGCTTCAGTACCTGATCCTGTTGGACATGTTGTGACTGATTGGGGTAGGGATCCTTTTAGCTATGGTGCTTATTCGTATGTTGCTATTGGAGCATCAG GAGAAGACTATGATATATTAGGGAGACCAGTTGATAATCGCTTGTTTTTTGCTGGTGAAGCGACCTGCAAAGAGCATCCTGATACAGTCGGTGGTGCAAT GATGAGTGGACTACGGGAGGCCGTTCGCATAATTGACATATTGAGCACGGGAAATGATTACACTGCAGAAGTGGAGGCAATGGAAGCTGCCTTGAGACAG TCAGATACCGAAAATGAAGTTAGGGATATAACAAAGAGACTCAACACAATAGAGCTTTCTAACCTGTTCTACAAGAACTCTTTGGATGATGCTCAAATAT TAACCCGGGAAGCTTTACTAAGAGAAATGTTCCTTAATGCGAAAACCAATGCTGGGCGCTTGCATGTGGCCAAAGAATTGCTATGCCTTCCTGTTGGAAA CTTGAAGTCGTTTGCTGGGAGTAAAGAAGGGCTAGCTGTTCTCAACTCATGGATACTGGACTCAATGGGGAAGGATGGTACCCAACTCTTGCGGCACTGT GTGCGTCTTCTTGTGCGTGTTTCAACTGATCTACTTGCTGTACGCTTGTCAGGGATAGGGAAAACAGTGAAGGAAAAAGTTTGTGTGCATGCTAGCCGTG ATATTCGAGCTATAGCAAGCCAGTTGGTTAATGTATGGCTTGAAGTTTTCCGCAAGGAAAAAAAAGCTTTTAATGGGGGATTGAAGTTGTCAAGACAAGC AATTGCCTTAGATCTATCAAAGAGAAAACATTTAAAAGATTCAGCCTCAGGAAAACCTCCTCTGAGTACACATCCTGGTAGCCTTGATAATAGAGGAAAA CAACAAGCAGCAATTGACTCAAGGCATGAGGTCAGCTCTTCCAGGTCCCAAGGTTCAATTAGCAAAGTACTCATCGAGAAGGAGGATAACTGCTATGTTA TTTCTGAAGAAGAACGGGCTGCTATAGCTGCTGCAGAAGCTGCCCGTGCTCAAGCACATGCTGCTGCCGAGGCATATGCTGCTGCAGAAGCCAGGCGCAA TAAGTTGTTACAGCTTCCAAAGATACCCTCATTCCAAAAATTCGCTTCAAAAAATGATGAGTGTGATAATAGAAAAAAGTGGTCTGGTGCTTTGGGAAGG CAAGATTGTATTTCAGAGATTGATTCGAGGAATTGCAGAGTTCGGGATTGGTCTGTTGATTTTTCTGCTGCTTGTGTTAACCTTGATAATTCGAGAATGC CAGTTGATAACCTTTCACAGAGGAGTCACTCAAATGAGATTGCCAGCCATTTCAATTTCAGAGAGAACTCAGGAGAAAGTGTTGCTGTGGACAGCAGTAT ATATACAAAAGCTTGGATTGACACAGCTGGTGGTGTGGGAATAAAAGATTCTGATGCCATAGACAGATGGCAATCTCAAGCAGCTGCAGCCGATTCTTAT TTTTCTAATCCAAGCATAAGTTTGAAGGATGAGGAGGATTCAAATGGGTGTTCAAGGTTACCCAGCTGGAAGCATGATGGTATGGCAAATGAGAGCTCAA TTTCACAGGTTACTGTAAATAAGGAAGCCTTGAAAAGTCATCACTCCCGTGGAGCAGATCATATTAAACAGGCTGTAGTGGATTATGTTGGATCACTACT TATGCCCCTTTATAAAGCAAGGAAACTAGACAAGGATGGCTACAAGGCTATAATGAAGAAAAGTGCAACAAAGGTCATTGAGAAAGCCACAGATAAAGAA AAGGCCATGACTGTTGATGAGTTTCTAGATTTTAAGCGAAAGACTAAGATTCGCTCCTTTGTGGACACATTGATTGAGAGACACATGGCAATAAAACCAG ATATGAAATCCTAATGTTACTGGTTGGGAATAACCTGTACTTTTTGGACTTCTGTGTAATAGTTGCTTAAATCTGGTACTTCAGTTCTCACAGTTTTTGT GGCCATTGACATTTTTGCTGATGAGCACCTCAATCTACCAATGTAAATTATTCAGAAGGTGCCATTAAAGAAACAGATAAAACCTGATCAATCCAAATTG AATGGGCTCTATGTTAATTCTTCCTCCAGGCAACCTTGAACAGAATACTAAAACATTAATGGTGGATTACCAGTGAACAGGCCTTACTACTTTTATAAAC AGATCCAATGCAAATGTCAGTTGGATCTTCCGTGGTACTGGCATCAGCAGGCTGAGGAAGATTATGTCATTCACAGATGGGAGGTAATAGACTATCTTCC TGCCACAGTATGCATAATTAAAATCCAATATCTAGAAGGGGTGATTCCTGAGTACATTCTTGTCATCGTAAGCAAATTATTTTTCTCTCAATCATTAATG CTTATAAATTTACCTTCATGTTGGTCGCAGCTATTTTGATGCTTACCAAATTGTATTTTCTTGATTTACTAGTACTAGTCCTAATTTTCAGATTAGCTAT TTTGGATTGTGTGC BLAST |
| Tissue | flowers |
| Gene name | LI_gene_83109; |
| Additional information | details; |
| FPAB | abscising flower pedicels |
| FPNAB | non-abscising flower pedicels |
| LF1 | lower flowers stage 1 |
| LF2 | lower flowers stage 2 |
| LF3 | lower flowers stage 3 |
| LF4 | lower flowers stage 4 |
| UF1 | upper flowers stage 1 |
| UF2 | upper flowers stage 2 |
| UF3 | upper flowers stage 3 |
| UF4 | upper flowers stage 4 |
Annotations of Ll_transcript_255027
| Blastp | Lysine-specific histone demethylase 1 homolog 3 from Arabidopsis with 56.32% of identity |
|---|---|
| Blastx | Lysine-specific histone demethylase 1 homolog 3 from Arabidopsis with 57.02% of identity |
| Eggnog | amine oxidase(ENOG410XSNC) |
| Kegg | Link to kegg annotations (AT4G16310) |
| CantataDB | - |
| Mirbase | - |
| Ncbi protein | Link to NCBI protein (XP_019458077.1) |
| Pfam | SWIRM domain (PF04433.16) |
| Rfam | - |
| GO | Links to GO: General; Genes and gene products; Annotations; Ontology; Links to GO: General; Genes and gene products; Annotations; Ontology; |